Experiment: m.b. Doxycycline hyclate 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1208 and B158DRAFT_1209 overlap by 1 nucleotides B158DRAFT_1209 and B158DRAFT_1210 are separated by 33 nucleotides
B158DRAFT_1208: B158DRAFT_1208 - cystathionine beta-synthase (acetylserine-dependent) (EC 4.2.1.-), at 1,248,502 to 1,249,467
_1208
B158DRAFT_1209: B158DRAFT_1209 - hypothetical protein, at 1,249,467 to 1,249,769
_1209
B158DRAFT_1210: B158DRAFT_1210 - Cystathionine beta-lyases/cystathionine gamma-synthases, at 1,249,803 to 1,250,978
_1210
Position (kb)
1249
1250 Strain fitness (log2 ratio)
-2
-1
0
1 at 1248.515 kb on - strand at 1248.588 kb on + strand at 1248.714 kb on + strand, within B158DRAFT_1208 at 1248.853 kb on + strand, within B158DRAFT_1208 at 1248.856 kb on - strand, within B158DRAFT_1208 at 1248.856 kb on - strand, within B158DRAFT_1208 at 1248.891 kb on + strand, within B158DRAFT_1208 at 1248.893 kb on - strand, within B158DRAFT_1208 at 1249.005 kb on + strand, within B158DRAFT_1208 at 1249.228 kb on - strand, within B158DRAFT_1208 at 1249.282 kb on + strand, within B158DRAFT_1208 at 1249.282 kb on + strand, within B158DRAFT_1208 at 1249.329 kb on + strand, within B158DRAFT_1208 at 1249.342 kb on + strand, within B158DRAFT_1208 at 1249.342 kb on + strand, within B158DRAFT_1208 at 1249.350 kb on - strand, within B158DRAFT_1208 at 1249.352 kb on + strand, within B158DRAFT_1208 at 1249.601 kb on + strand, within B158DRAFT_1209 at 1249.601 kb on + strand, within B158DRAFT_1209 at 1249.637 kb on + strand, within B158DRAFT_1209 at 1249.727 kb on + strand, within B158DRAFT_1209 at 1249.727 kb on + strand, within B158DRAFT_1209 at 1249.742 kb on + strand at 1249.742 kb on + strand at 1249.742 kb on + strand at 1249.742 kb on + strand at 1249.742 kb on + strand at 1249.742 kb on + strand at 1249.742 kb on + strand at 1249.742 kb on + strand at 1249.742 kb on + strand at 1249.742 kb on + strand at 1249.742 kb on + strand at 1249.742 kb on + strand at 1249.742 kb on + strand at 1249.742 kb on + strand at 1249.742 kb on + strand at 1249.742 kb on + strand at 1249.750 kb on - strand at 1249.750 kb on - strand at 1249.783 kb on + strand at 1249.783 kb on + strand at 1249.783 kb on + strand at 1250.018 kb on + strand, within B158DRAFT_1210 at 1250.058 kb on + strand, within B158DRAFT_1210 at 1250.080 kb on + strand, within B158DRAFT_1210 at 1250.095 kb on - strand, within B158DRAFT_1210 at 1250.187 kb on + strand, within B158DRAFT_1210 at 1250.257 kb on - strand, within B158DRAFT_1210 at 1250.353 kb on - strand, within B158DRAFT_1210 at 1250.597 kb on - strand, within B158DRAFT_1210 at 1250.647 kb on - strand, within B158DRAFT_1210 at 1250.723 kb on + strand, within B158DRAFT_1210 at 1250.731 kb on - strand, within B158DRAFT_1210
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Doxycycline hyclate 0.03125 mg/ml remove 1,248,515 - -1.8 1,248,588 + +0.0 1,248,714 + B158DRAFT_1208 0.22 +0.5 1,248,853 + B158DRAFT_1208 0.36 -0.3 1,248,856 - B158DRAFT_1208 0.37 -1.9 1,248,856 - B158DRAFT_1208 0.37 -1.5 1,248,891 + B158DRAFT_1208 0.40 -0.8 1,248,893 - B158DRAFT_1208 0.40 -1.2 1,249,005 + B158DRAFT_1208 0.52 -0.6 1,249,228 - B158DRAFT_1208 0.75 -1.3 1,249,282 + B158DRAFT_1208 0.81 +0.5 1,249,282 + B158DRAFT_1208 0.81 -0.9 1,249,329 + B158DRAFT_1208 0.86 -1.5 1,249,342 + B158DRAFT_1208 0.87 -2.1 1,249,342 + B158DRAFT_1208 0.87 -1.3 1,249,350 - B158DRAFT_1208 0.88 -0.8 1,249,352 + B158DRAFT_1208 0.88 -2.3 1,249,601 + B158DRAFT_1209 0.44 -0.7 1,249,601 + B158DRAFT_1209 0.44 -0.7 1,249,637 + B158DRAFT_1209 0.56 -0.2 1,249,727 + B158DRAFT_1209 0.86 +1.0 1,249,727 + B158DRAFT_1209 0.86 +0.3 1,249,742 + -0.1 1,249,742 + -0.4 1,249,742 + -0.7 1,249,742 + -0.5 1,249,742 + -1.7 1,249,742 + -0.1 1,249,742 + +0.8 1,249,742 + -0.5 1,249,742 + -0.4 1,249,742 + +1.1 1,249,742 + -1.5 1,249,742 + -0.1 1,249,742 + -0.0 1,249,742 + +0.0 1,249,742 + -0.3 1,249,742 + -0.7 1,249,750 - -1.3 1,249,750 - -1.5 1,249,783 + -0.2 1,249,783 + -0.2 1,249,783 + +0.1 1,250,018 + B158DRAFT_1210 0.18 -0.5 1,250,058 + B158DRAFT_1210 0.22 -1.3 1,250,080 + B158DRAFT_1210 0.24 -1.2 1,250,095 - B158DRAFT_1210 0.25 -2.5 1,250,187 + B158DRAFT_1210 0.33 -1.4 1,250,257 - B158DRAFT_1210 0.39 -1.3 1,250,353 - B158DRAFT_1210 0.47 -0.8 1,250,597 - B158DRAFT_1210 0.68 -1.8 1,250,647 - B158DRAFT_1210 0.72 -0.2 1,250,723 + B158DRAFT_1210 0.78 -0.4 1,250,731 - B158DRAFT_1210 0.79 -0.8
Or see this region's nucleotide sequence