Experiment: m.b. Doxycycline hyclate 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0914 and B158DRAFT_0915 are separated by 53 nucleotides B158DRAFT_0915 and B158DRAFT_0916 are separated by 28 nucleotides B158DRAFT_0916 and B158DRAFT_0917 are separated by 161 nucleotides B158DRAFT_0917 and B158DRAFT_0918 are separated by 15 nucleotides
B158DRAFT_0914: B158DRAFT_0914 - Dipeptidyl aminopeptidases/acylaminoacyl-peptidases, at 940,219 to 942,651
_0914
B158DRAFT_0915: B158DRAFT_0915 - hypothetical protein, at 942,705 to 943,592
_0915
B158DRAFT_0916: B158DRAFT_0916 - Nitroreductase, at 943,621 to 944,223
_0916
B158DRAFT_0917: B158DRAFT_0917 - Sel1 repeat., at 944,385 to 945,206
_0917
B158DRAFT_0918: B158DRAFT_0918 - hypothetical protein, at 945,222 to 945,740
_0918
Position (kb) 943
944
945 Strain fitness (log2 ratio) -1
0
1
2
3
4
5 at 942.649 kb on - strand at 942.759 kb on + strand at 942.767 kb on - strand at 942.767 kb on - strand at 942.767 kb on - strand at 942.767 kb on - strand at 942.769 kb on + strand at 942.784 kb on + strand at 942.794 kb on - strand, within B158DRAFT_0915 at 942.799 kb on - strand, within B158DRAFT_0915 at 942.852 kb on + strand, within B158DRAFT_0915 at 942.902 kb on - strand, within B158DRAFT_0915 at 942.961 kb on + strand, within B158DRAFT_0915 at 942.963 kb on + strand, within B158DRAFT_0915 at 942.963 kb on + strand, within B158DRAFT_0915 at 942.963 kb on + strand, within B158DRAFT_0915 at 942.963 kb on + strand, within B158DRAFT_0915 at 942.963 kb on + strand, within B158DRAFT_0915 at 942.971 kb on - strand, within B158DRAFT_0915 at 942.971 kb on - strand, within B158DRAFT_0915 at 942.971 kb on - strand, within B158DRAFT_0915 at 942.971 kb on - strand, within B158DRAFT_0915 at 942.971 kb on - strand, within B158DRAFT_0915 at 942.971 kb on - strand, within B158DRAFT_0915 at 942.971 kb on - strand, within B158DRAFT_0915 at 943.021 kb on - strand, within B158DRAFT_0915 at 943.093 kb on + strand, within B158DRAFT_0915 at 943.197 kb on + strand, within B158DRAFT_0915 at 943.270 kb on - strand, within B158DRAFT_0915 at 943.398 kb on + strand, within B158DRAFT_0915 at 943.418 kb on - strand, within B158DRAFT_0915 at 943.418 kb on - strand, within B158DRAFT_0915 at 943.425 kb on + strand, within B158DRAFT_0915 at 943.443 kb on - strand, within B158DRAFT_0915 at 943.482 kb on + strand, within B158DRAFT_0915 at 943.489 kb on + strand, within B158DRAFT_0915 at 943.508 kb on - strand at 943.510 kb on + strand at 943.510 kb on + strand at 943.510 kb on + strand at 943.518 kb on - strand at 943.532 kb on - strand at 944.252 kb on - strand at 944.279 kb on + strand at 944.286 kb on + strand at 944.287 kb on - strand at 944.294 kb on - strand at 944.307 kb on + strand at 944.307 kb on + strand at 944.370 kb on - strand at 944.372 kb on + strand at 944.396 kb on + strand at 944.396 kb on + strand at 944.419 kb on + strand at 944.427 kb on - strand at 944.427 kb on - strand at 944.429 kb on + strand at 944.497 kb on - strand, within B158DRAFT_0917 at 944.497 kb on - strand, within B158DRAFT_0917 at 944.570 kb on - strand, within B158DRAFT_0917 at 944.588 kb on + strand, within B158DRAFT_0917 at 944.602 kb on + strand, within B158DRAFT_0917 at 944.602 kb on + strand, within B158DRAFT_0917 at 944.602 kb on + strand, within B158DRAFT_0917 at 944.610 kb on - strand, within B158DRAFT_0917 at 944.610 kb on - strand, within B158DRAFT_0917 at 944.610 kb on - strand, within B158DRAFT_0917 at 944.744 kb on + strand, within B158DRAFT_0917 at 944.790 kb on + strand, within B158DRAFT_0917 at 944.795 kb on - strand, within B158DRAFT_0917 at 944.800 kb on - strand, within B158DRAFT_0917 at 944.800 kb on - strand, within B158DRAFT_0917 at 944.800 kb on - strand, within B158DRAFT_0917 at 944.826 kb on + strand, within B158DRAFT_0917 at 944.826 kb on + strand, within B158DRAFT_0917 at 944.875 kb on + strand, within B158DRAFT_0917 at 944.888 kb on - strand, within B158DRAFT_0917 at 944.898 kb on + strand, within B158DRAFT_0917 at 944.917 kb on + strand, within B158DRAFT_0917 at 944.917 kb on + strand, within B158DRAFT_0917 at 944.917 kb on + strand, within B158DRAFT_0917 at 944.917 kb on + strand, within B158DRAFT_0917 at 944.918 kb on + strand, within B158DRAFT_0917 at 944.925 kb on - strand, within B158DRAFT_0917 at 944.925 kb on - strand, within B158DRAFT_0917 at 944.925 kb on - strand, within B158DRAFT_0917 at 944.925 kb on - strand, within B158DRAFT_0917 at 944.926 kb on - strand, within B158DRAFT_0917 at 944.965 kb on + strand, within B158DRAFT_0917 at 944.973 kb on - strand, within B158DRAFT_0917 at 944.988 kb on + strand, within B158DRAFT_0917 at 945.015 kb on - strand, within B158DRAFT_0917 at 945.015 kb on - strand, within B158DRAFT_0917 at 945.043 kb on - strand, within B158DRAFT_0917 at 945.105 kb on + strand, within B158DRAFT_0917
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Doxycycline hyclate 0.03125 mg/ml remove 942,649 - -1.4 942,759 + +0.6 942,767 - -0.5 942,767 - +0.1 942,767 - +0.1 942,767 - -1.1 942,769 + +0.6 942,784 + -0.4 942,794 - B158DRAFT_0915 0.10 +0.8 942,799 - B158DRAFT_0915 0.11 +0.1 942,852 + B158DRAFT_0915 0.17 +0.5 942,902 - B158DRAFT_0915 0.22 +0.3 942,961 + B158DRAFT_0915 0.29 +0.4 942,963 + B158DRAFT_0915 0.29 -0.7 942,963 + B158DRAFT_0915 0.29 +0.3 942,963 + B158DRAFT_0915 0.29 +0.4 942,963 + B158DRAFT_0915 0.29 +0.3 942,963 + B158DRAFT_0915 0.29 +0.2 942,971 - B158DRAFT_0915 0.30 +0.2 942,971 - B158DRAFT_0915 0.30 +0.3 942,971 - B158DRAFT_0915 0.30 +0.0 942,971 - B158DRAFT_0915 0.30 +0.0 942,971 - B158DRAFT_0915 0.30 +1.3 942,971 - B158DRAFT_0915 0.30 +0.5 942,971 - B158DRAFT_0915 0.30 +0.9 943,021 - B158DRAFT_0915 0.36 +0.3 943,093 + B158DRAFT_0915 0.44 +0.6 943,197 + B158DRAFT_0915 0.55 +0.2 943,270 - B158DRAFT_0915 0.64 +0.4 943,398 + B158DRAFT_0915 0.78 +0.3 943,418 - B158DRAFT_0915 0.80 -0.4 943,418 - B158DRAFT_0915 0.80 -0.1 943,425 + B158DRAFT_0915 0.81 +0.4 943,443 - B158DRAFT_0915 0.83 +0.4 943,482 + B158DRAFT_0915 0.88 +1.0 943,489 + B158DRAFT_0915 0.88 +0.3 943,508 - +1.0 943,510 + +0.1 943,510 + +0.1 943,510 + +1.1 943,518 - +0.1 943,532 - -0.3 944,252 - -0.4 944,279 + +1.2 944,286 + +1.6 944,287 - +3.0 944,294 - +2.8 944,307 + +2.9 944,307 + +1.7 944,370 - +3.6 944,372 + +1.6 944,396 + +2.8 944,396 + +3.5 944,419 + +3.3 944,427 - +2.9 944,427 - +3.1 944,429 + +3.5 944,497 - B158DRAFT_0917 0.14 +3.4 944,497 - B158DRAFT_0917 0.14 +3.4 944,570 - B158DRAFT_0917 0.23 +3.1 944,588 + B158DRAFT_0917 0.25 +3.4 944,602 + B158DRAFT_0917 0.26 +3.2 944,602 + B158DRAFT_0917 0.26 +4.0 944,602 + B158DRAFT_0917 0.26 +3.3 944,610 - B158DRAFT_0917 0.27 +3.7 944,610 - B158DRAFT_0917 0.27 +3.4 944,610 - B158DRAFT_0917 0.27 +3.4 944,744 + B158DRAFT_0917 0.44 +3.4 944,790 + B158DRAFT_0917 0.49 +3.2 944,795 - B158DRAFT_0917 0.50 +3.4 944,800 - B158DRAFT_0917 0.50 +3.6 944,800 - B158DRAFT_0917 0.50 +3.6 944,800 - B158DRAFT_0917 0.50 +3.6 944,826 + B158DRAFT_0917 0.54 +3.6 944,826 + B158DRAFT_0917 0.54 +2.0 944,875 + B158DRAFT_0917 0.60 +2.8 944,888 - B158DRAFT_0917 0.61 +3.7 944,898 + B158DRAFT_0917 0.62 +3.1 944,917 + B158DRAFT_0917 0.65 +3.5 944,917 + B158DRAFT_0917 0.65 +4.9 944,917 + B158DRAFT_0917 0.65 +3.5 944,917 + B158DRAFT_0917 0.65 +3.3 944,918 + B158DRAFT_0917 0.65 +3.1 944,925 - B158DRAFT_0917 0.66 +3.5 944,925 - B158DRAFT_0917 0.66 +3.2 944,925 - B158DRAFT_0917 0.66 +3.3 944,925 - B158DRAFT_0917 0.66 +3.5 944,926 - B158DRAFT_0917 0.66 +3.3 944,965 + B158DRAFT_0917 0.71 +3.5 944,973 - B158DRAFT_0917 0.72 +2.9 944,988 + B158DRAFT_0917 0.73 +1.6 945,015 - B158DRAFT_0917 0.77 +3.6 945,015 - B158DRAFT_0917 0.77 +3.1 945,043 - B158DRAFT_0917 0.80 +3.5 945,105 + B158DRAFT_0917 0.88 +3.6
Or see this region's nucleotide sequence