Experiment: m.b. Doxycycline hyclate 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0100 and B158DRAFT_0101 are separated by 195 nucleotides B158DRAFT_0101 and B158DRAFT_0102 are separated by 728 nucleotides
B158DRAFT_0100: B158DRAFT_0100 - Na+/proline symporter, at 93,960 to 95,360
_0100
B158DRAFT_0101: B158DRAFT_0101 - YceI-like domain., at 95,556 to 96,170
_0101
B158DRAFT_0102: B158DRAFT_0102 - hypothetical protein, at 96,899 to 97,384
_0102
Position (kb)
95
96
97 Strain fitness (log2 ratio)
-1
0
1
2 at 94.558 kb on + strand, within B158DRAFT_0100 at 94.566 kb on - strand, within B158DRAFT_0100 at 94.576 kb on - strand, within B158DRAFT_0100 at 94.583 kb on + strand, within B158DRAFT_0100 at 94.591 kb on - strand, within B158DRAFT_0100 at 94.591 kb on - strand, within B158DRAFT_0100 at 94.591 kb on - strand, within B158DRAFT_0100 at 94.591 kb on - strand, within B158DRAFT_0100 at 94.601 kb on + strand, within B158DRAFT_0100 at 94.626 kb on - strand, within B158DRAFT_0100 at 94.630 kb on - strand, within B158DRAFT_0100 at 94.707 kb on - strand, within B158DRAFT_0100 at 94.733 kb on + strand, within B158DRAFT_0100 at 94.743 kb on + strand, within B158DRAFT_0100 at 94.743 kb on + strand, within B158DRAFT_0100 at 94.743 kb on + strand, within B158DRAFT_0100 at 94.743 kb on + strand, within B158DRAFT_0100 at 94.743 kb on + strand, within B158DRAFT_0100 at 94.743 kb on + strand, within B158DRAFT_0100 at 94.743 kb on + strand, within B158DRAFT_0100 at 94.743 kb on + strand, within B158DRAFT_0100 at 94.751 kb on - strand, within B158DRAFT_0100 at 94.818 kb on + strand, within B158DRAFT_0100 at 94.829 kb on + strand, within B158DRAFT_0100 at 94.829 kb on + strand, within B158DRAFT_0100 at 94.841 kb on - strand, within B158DRAFT_0100 at 94.951 kb on + strand, within B158DRAFT_0100 at 94.951 kb on + strand, within B158DRAFT_0100 at 94.951 kb on + strand, within B158DRAFT_0100 at 94.951 kb on + strand, within B158DRAFT_0100 at 94.964 kb on - strand, within B158DRAFT_0100 at 94.969 kb on + strand, within B158DRAFT_0100 at 94.977 kb on - strand, within B158DRAFT_0100 at 94.977 kb on - strand, within B158DRAFT_0100 at 94.985 kb on - strand, within B158DRAFT_0100 at 95.029 kb on - strand, within B158DRAFT_0100 at 95.034 kb on - strand, within B158DRAFT_0100 at 95.040 kb on + strand, within B158DRAFT_0100 at 95.048 kb on + strand, within B158DRAFT_0100 at 95.064 kb on - strand, within B158DRAFT_0100 at 95.064 kb on - strand, within B158DRAFT_0100 at 95.117 kb on + strand, within B158DRAFT_0100 at 95.177 kb on - strand, within B158DRAFT_0100 at 95.291 kb on - strand at 95.370 kb on + strand at 95.377 kb on - strand at 95.380 kb on + strand at 95.399 kb on + strand at 95.407 kb on - strand at 95.607 kb on + strand at 95.610 kb on + strand at 95.610 kb on + strand at 95.612 kb on + strand at 95.676 kb on - strand, within B158DRAFT_0101 at 95.681 kb on - strand, within B158DRAFT_0101 at 95.689 kb on - strand, within B158DRAFT_0101 at 95.709 kb on + strand, within B158DRAFT_0101 at 95.714 kb on + strand, within B158DRAFT_0101 at 95.722 kb on - strand, within B158DRAFT_0101 at 95.722 kb on - strand, within B158DRAFT_0101 at 95.817 kb on - strand, within B158DRAFT_0101 at 95.991 kb on + strand, within B158DRAFT_0101 at 96.058 kb on + strand, within B158DRAFT_0101 at 96.058 kb on + strand, within B158DRAFT_0101 at 96.058 kb on + strand, within B158DRAFT_0101 at 96.066 kb on - strand, within B158DRAFT_0101 at 96.066 kb on - strand, within B158DRAFT_0101 at 96.066 kb on - strand, within B158DRAFT_0101 at 96.403 kb on - strand at 96.403 kb on - strand at 96.403 kb on - strand at 96.403 kb on - strand at 96.436 kb on + strand at 96.456 kb on + strand at 96.482 kb on + strand at 96.482 kb on + strand at 96.490 kb on - strand at 96.596 kb on + strand at 96.682 kb on + strand at 96.734 kb on - strand at 96.744 kb on - strand at 96.764 kb on + strand at 96.764 kb on + strand at 96.771 kb on - strand at 97.056 kb on + strand, within B158DRAFT_0102 at 97.056 kb on + strand, within B158DRAFT_0102 at 97.056 kb on + strand, within B158DRAFT_0102 at 97.056 kb on + strand, within B158DRAFT_0102 at 97.056 kb on + strand, within B158DRAFT_0102 at 97.056 kb on + strand, within B158DRAFT_0102 at 97.056 kb on + strand, within B158DRAFT_0102 at 97.056 kb on + strand, within B158DRAFT_0102 at 97.064 kb on - strand, within B158DRAFT_0102 at 97.064 kb on - strand, within B158DRAFT_0102 at 97.064 kb on - strand, within B158DRAFT_0102 at 97.064 kb on - strand, within B158DRAFT_0102 at 97.064 kb on - strand, within B158DRAFT_0102 at 97.064 kb on - strand, within B158DRAFT_0102 at 97.064 kb on - strand, within B158DRAFT_0102 at 97.064 kb on - strand, within B158DRAFT_0102 at 97.064 kb on - strand, within B158DRAFT_0102 at 97.064 kb on - strand, within B158DRAFT_0102 at 97.064 kb on - strand, within B158DRAFT_0102 at 97.125 kb on + strand, within B158DRAFT_0102 at 97.130 kb on + strand at 97.158 kb on - strand, within B158DRAFT_0102 at 97.158 kb on - strand, within B158DRAFT_0102
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Doxycycline hyclate 0.03125 mg/ml remove 94,558 + B158DRAFT_0100 0.43 -0.2 94,566 - B158DRAFT_0100 0.43 -0.5 94,576 - B158DRAFT_0100 0.44 -1.6 94,583 + B158DRAFT_0100 0.44 -1.1 94,591 - B158DRAFT_0100 0.45 -0.4 94,591 - B158DRAFT_0100 0.45 -0.1 94,591 - B158DRAFT_0100 0.45 +0.1 94,591 - B158DRAFT_0100 0.45 -0.2 94,601 + B158DRAFT_0100 0.46 -0.6 94,626 - B158DRAFT_0100 0.48 -0.5 94,630 - B158DRAFT_0100 0.48 -1.0 94,707 - B158DRAFT_0100 0.53 -0.6 94,733 + B158DRAFT_0100 0.55 -1.4 94,743 + B158DRAFT_0100 0.56 -0.7 94,743 + B158DRAFT_0100 0.56 -0.5 94,743 + B158DRAFT_0100 0.56 -0.1 94,743 + B158DRAFT_0100 0.56 -0.5 94,743 + B158DRAFT_0100 0.56 -0.3 94,743 + B158DRAFT_0100 0.56 -0.6 94,743 + B158DRAFT_0100 0.56 -0.3 94,743 + B158DRAFT_0100 0.56 +0.0 94,751 - B158DRAFT_0100 0.56 -0.4 94,818 + B158DRAFT_0100 0.61 +0.4 94,829 + B158DRAFT_0100 0.62 -0.7 94,829 + B158DRAFT_0100 0.62 -0.9 94,841 - B158DRAFT_0100 0.63 -0.3 94,951 + B158DRAFT_0100 0.71 -0.4 94,951 + B158DRAFT_0100 0.71 -0.4 94,951 + B158DRAFT_0100 0.71 -0.4 94,951 + B158DRAFT_0100 0.71 -0.4 94,964 - B158DRAFT_0100 0.72 -0.0 94,969 + B158DRAFT_0100 0.72 -0.4 94,977 - B158DRAFT_0100 0.73 -0.0 94,977 - B158DRAFT_0100 0.73 -0.1 94,985 - B158DRAFT_0100 0.73 -0.3 95,029 - B158DRAFT_0100 0.76 -0.6 95,034 - B158DRAFT_0100 0.77 +2.0 95,040 + B158DRAFT_0100 0.77 -0.1 95,048 + B158DRAFT_0100 0.78 +1.4 95,064 - B158DRAFT_0100 0.79 -0.2 95,064 - B158DRAFT_0100 0.79 -0.3 95,117 + B158DRAFT_0100 0.83 -0.2 95,177 - B158DRAFT_0100 0.87 -0.7 95,291 - -0.4 95,370 + -0.2 95,377 - +0.1 95,380 + +0.0 95,399 + -0.3 95,407 - +0.2 95,607 + -0.3 95,610 + -0.4 95,610 + +0.0 95,612 + +0.5 95,676 - B158DRAFT_0101 0.20 -0.1 95,681 - B158DRAFT_0101 0.20 +0.6 95,689 - B158DRAFT_0101 0.22 +0.0 95,709 + B158DRAFT_0101 0.25 -0.6 95,714 + B158DRAFT_0101 0.26 +0.0 95,722 - B158DRAFT_0101 0.27 +0.0 95,722 - B158DRAFT_0101 0.27 +0.5 95,817 - B158DRAFT_0101 0.42 +0.1 95,991 + B158DRAFT_0101 0.71 -0.0 96,058 + B158DRAFT_0101 0.82 +0.1 96,058 + B158DRAFT_0101 0.82 -0.1 96,058 + B158DRAFT_0101 0.82 +0.6 96,066 - B158DRAFT_0101 0.83 +0.2 96,066 - B158DRAFT_0101 0.83 -0.6 96,066 - B158DRAFT_0101 0.83 +0.1 96,403 - -0.9 96,403 - -0.4 96,403 - -0.1 96,403 - -0.4 96,436 + -0.7 96,456 + -0.2 96,482 + -0.0 96,482 + +0.7 96,490 - +0.4 96,596 + -0.2 96,682 + -0.7 96,734 - -0.1 96,744 - +0.1 96,764 + +0.7 96,764 + +0.1 96,771 - +0.1 97,056 + B158DRAFT_0102 0.32 -0.7 97,056 + B158DRAFT_0102 0.32 -0.8 97,056 + B158DRAFT_0102 0.32 -1.1 97,056 + B158DRAFT_0102 0.32 +0.3 97,056 + B158DRAFT_0102 0.32 +0.1 97,056 + B158DRAFT_0102 0.32 +0.3 97,056 + B158DRAFT_0102 0.32 -0.6 97,056 + B158DRAFT_0102 0.32 -0.2 97,064 - B158DRAFT_0102 0.34 +0.0 97,064 - B158DRAFT_0102 0.34 +0.1 97,064 - B158DRAFT_0102 0.34 -0.0 97,064 - B158DRAFT_0102 0.34 +0.3 97,064 - B158DRAFT_0102 0.34 +0.6 97,064 - B158DRAFT_0102 0.34 -0.4 97,064 - B158DRAFT_0102 0.34 -0.5 97,064 - B158DRAFT_0102 0.34 +0.1 97,064 - B158DRAFT_0102 0.34 +0.0 97,064 - B158DRAFT_0102 0.34 -0.5 97,064 - B158DRAFT_0102 0.34 +0.0 97,125 + B158DRAFT_0102 0.47 -0.5 97,130 + +0.4 97,158 - B158DRAFT_0102 0.53 +0.1 97,158 - B158DRAFT_0102 0.53 -0.4
Or see this region's nucleotide sequence