Experiment: m.b. Doxycycline hyclate 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2529 and B158DRAFT_2530 are separated by 27 nucleotides B158DRAFT_2530 and B158DRAFT_2531 are separated by 87 nucleotides B158DRAFT_2531 and B158DRAFT_2532 are separated by 57 nucleotides
B158DRAFT_2529: B158DRAFT_2529 - NAD synthase, at 719,161 to 720,783
_2529
B158DRAFT_2530: B158DRAFT_2530 - nitrogen regulatory protein P-II family, at 720,811 to 721,149
_2530
B158DRAFT_2531: B158DRAFT_2531 - Beta-barrel assembly machine subunit BamD, at 721,237 to 722,043
_2531
B158DRAFT_2532: B158DRAFT_2532 - Pseudouridylate synthases, 23S RNA-specific, at 722,101 to 723,075
_2532
Position (kb) 721
722
723 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 720.749 kb on + strand at 720.749 kb on + strand at 720.749 kb on + strand at 720.768 kb on + strand at 720.768 kb on + strand at 720.768 kb on + strand at 720.776 kb on - strand at 720.776 kb on - strand at 720.786 kb on - strand at 720.865 kb on + strand, within B158DRAFT_2530 at 721.068 kb on - strand, within B158DRAFT_2530 at 721.123 kb on + strand at 721.196 kb on - strand at 721.196 kb on - strand at 721.230 kb on - strand at 721.258 kb on - strand at 722.114 kb on + strand at 722.130 kb on + strand at 722.134 kb on - strand at 722.159 kb on + strand at 722.271 kb on + strand, within B158DRAFT_2532 at 722.285 kb on + strand, within B158DRAFT_2532 at 722.331 kb on + strand, within B158DRAFT_2532 at 722.339 kb on - strand, within B158DRAFT_2532 at 722.458 kb on + strand, within B158DRAFT_2532 at 722.466 kb on + strand, within B158DRAFT_2532 at 722.466 kb on + strand, within B158DRAFT_2532 at 722.471 kb on + strand, within B158DRAFT_2532 at 722.471 kb on + strand, within B158DRAFT_2532 at 722.474 kb on - strand, within B158DRAFT_2532 at 722.526 kb on + strand, within B158DRAFT_2532 at 722.672 kb on + strand, within B158DRAFT_2532 at 722.672 kb on - strand, within B158DRAFT_2532 at 722.723 kb on - strand, within B158DRAFT_2532 at 722.734 kb on - strand, within B158DRAFT_2532 at 722.803 kb on + strand, within B158DRAFT_2532 at 722.803 kb on + strand, within B158DRAFT_2532 at 722.803 kb on + strand, within B158DRAFT_2532 at 722.803 kb on + strand, within B158DRAFT_2532 at 722.811 kb on - strand, within B158DRAFT_2532 at 722.811 kb on - strand, within B158DRAFT_2532 at 722.811 kb on - strand, within B158DRAFT_2532 at 722.854 kb on + strand, within B158DRAFT_2532 at 722.854 kb on + strand, within B158DRAFT_2532 at 722.854 kb on + strand, within B158DRAFT_2532 at 722.854 kb on + strand, within B158DRAFT_2532 at 722.854 kb on + strand, within B158DRAFT_2532 at 722.862 kb on - strand, within B158DRAFT_2532 at 722.862 kb on - strand, within B158DRAFT_2532 at 722.875 kb on + strand, within B158DRAFT_2532 at 722.878 kb on - strand, within B158DRAFT_2532 at 722.881 kb on - strand, within B158DRAFT_2532 at 722.881 kb on - strand, within B158DRAFT_2532 at 722.881 kb on - strand, within B158DRAFT_2532 at 722.922 kb on + strand, within B158DRAFT_2532 at 722.957 kb on + strand, within B158DRAFT_2532 at 722.957 kb on + strand, within B158DRAFT_2532 at 722.957 kb on + strand, within B158DRAFT_2532 at 722.957 kb on + strand, within B158DRAFT_2532 at 722.957 kb on + strand, within B158DRAFT_2532 at 722.965 kb on - strand, within B158DRAFT_2532 at 722.965 kb on - strand, within B158DRAFT_2532 at 722.967 kb on + strand, within B158DRAFT_2532 at 722.967 kb on + strand, within B158DRAFT_2532
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Doxycycline hyclate 0.0625 mg/ml remove 720,749 + +0.4 720,749 + -0.2 720,749 + +0.1 720,768 + -0.2 720,768 + -0.3 720,768 + -0.5 720,776 - -1.9 720,776 - -1.0 720,786 - -1.8 720,865 + B158DRAFT_2530 0.16 -4.6 721,068 - B158DRAFT_2530 0.76 -2.5 721,123 + -2.5 721,196 - -0.1 721,196 - +0.1 721,230 - -0.1 721,258 - +0.0 722,114 + -1.9 722,130 + -2.5 722,134 - -1.1 722,159 + -0.9 722,271 + B158DRAFT_2532 0.17 -1.1 722,285 + B158DRAFT_2532 0.19 -1.0 722,331 + B158DRAFT_2532 0.24 -1.1 722,339 - B158DRAFT_2532 0.24 -1.0 722,458 + B158DRAFT_2532 0.37 -0.8 722,466 + B158DRAFT_2532 0.37 -2.9 722,466 + B158DRAFT_2532 0.37 -0.9 722,471 + B158DRAFT_2532 0.38 -0.6 722,471 + B158DRAFT_2532 0.38 -0.8 722,474 - B158DRAFT_2532 0.38 -2.5 722,526 + B158DRAFT_2532 0.44 -0.4 722,672 + B158DRAFT_2532 0.59 -1.9 722,672 - B158DRAFT_2532 0.59 -0.5 722,723 - B158DRAFT_2532 0.64 -0.8 722,734 - B158DRAFT_2532 0.65 -0.9 722,803 + B158DRAFT_2532 0.72 -0.6 722,803 + B158DRAFT_2532 0.72 -1.3 722,803 + B158DRAFT_2532 0.72 -0.3 722,803 + B158DRAFT_2532 0.72 -1.1 722,811 - B158DRAFT_2532 0.73 -0.6 722,811 - B158DRAFT_2532 0.73 -2.0 722,811 - B158DRAFT_2532 0.73 -1.2 722,854 + B158DRAFT_2532 0.77 -1.0 722,854 + B158DRAFT_2532 0.77 -2.3 722,854 + B158DRAFT_2532 0.77 -0.8 722,854 + B158DRAFT_2532 0.77 -0.5 722,854 + B158DRAFT_2532 0.77 -0.9 722,862 - B158DRAFT_2532 0.78 -2.3 722,862 - B158DRAFT_2532 0.78 -1.7 722,875 + B158DRAFT_2532 0.79 -0.6 722,878 - B158DRAFT_2532 0.80 -0.6 722,881 - B158DRAFT_2532 0.80 -1.6 722,881 - B158DRAFT_2532 0.80 -0.9 722,881 - B158DRAFT_2532 0.80 -0.5 722,922 + B158DRAFT_2532 0.84 -1.4 722,957 + B158DRAFT_2532 0.88 -0.7 722,957 + B158DRAFT_2532 0.88 -0.2 722,957 + B158DRAFT_2532 0.88 -0.8 722,957 + B158DRAFT_2532 0.88 -1.1 722,957 + B158DRAFT_2532 0.88 -0.5 722,965 - B158DRAFT_2532 0.89 -2.3 722,965 - B158DRAFT_2532 0.89 -1.2 722,967 + B158DRAFT_2532 0.89 -1.0 722,967 + B158DRAFT_2532 0.89 -0.8
Or see this region's nucleotide sequence