Experiment: m.b. Doxycycline hyclate 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2327 and B158DRAFT_2328 are separated by 174 nucleotides B158DRAFT_2328 and B158DRAFT_2329 are separated by 42 nucleotides B158DRAFT_2329 and B158DRAFT_2330 are separated by 1 nucleotides B158DRAFT_2330 and B158DRAFT_2331 are separated by 4 nucleotides B158DRAFT_2331 and B158DRAFT_2332 are separated by 83 nucleotides
B158DRAFT_2327: B158DRAFT_2327 - ribosomal protein S1, at 494,186 to 495,853
_2327
B158DRAFT_2328: B158DRAFT_2328 - integration host factor, beta subunit, at 496,028 to 496,330
_2328
B158DRAFT_2329: B158DRAFT_2329 - Predicted membrane protein, at 496,373 to 496,666
_2329
B158DRAFT_2330: B158DRAFT_2330 - Predicted N-acetylglucosaminyl transferase, at 496,668 to 497,843
_2330
B158DRAFT_2331: B158DRAFT_2331 - orotidine-5'-phosphate decarboxylase (EC 4.1.1.23), at 497,848 to 498,543
_2331
B158DRAFT_2332: B158DRAFT_2332 - competence protein ComEA helix-hairpin-helix repeat region, at 498,627 to 498,938
_2332
Position (kb) 496
497
498 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 495.895 kb on - strand at 496.003 kb on + strand at 496.058 kb on + strand at 496.309 kb on + strand at 496.309 kb on + strand at 496.309 kb on + strand at 496.309 kb on + strand at 496.323 kb on + strand at 496.323 kb on + strand at 496.353 kb on + strand at 497.201 kb on + strand, within B158DRAFT_2330 at 497.450 kb on + strand, within B158DRAFT_2330 at 497.606 kb on + strand, within B158DRAFT_2330 at 497.606 kb on + strand, within B158DRAFT_2330 at 497.606 kb on + strand, within B158DRAFT_2330 at 497.625 kb on + strand, within B158DRAFT_2330 at 497.650 kb on + strand, within B158DRAFT_2330 at 497.791 kb on + strand at 497.791 kb on + strand at 497.791 kb on + strand at 497.791 kb on + strand at 497.791 kb on + strand at 497.799 kb on + strand at 498.540 kb on - strand at 498.719 kb on + strand, within B158DRAFT_2332 at 498.719 kb on + strand, within B158DRAFT_2332 at 498.719 kb on + strand, within B158DRAFT_2332 at 498.727 kb on - strand, within B158DRAFT_2332 at 498.727 kb on - strand, within B158DRAFT_2332 at 498.740 kb on + strand, within B158DRAFT_2332 at 498.748 kb on - strand, within B158DRAFT_2332 at 498.748 kb on - strand, within B158DRAFT_2332 at 498.780 kb on - strand, within B158DRAFT_2332 at 498.789 kb on + strand, within B158DRAFT_2332 at 498.789 kb on + strand, within B158DRAFT_2332 at 498.789 kb on + strand, within B158DRAFT_2332 at 498.789 kb on + strand, within B158DRAFT_2332 at 498.799 kb on - strand, within B158DRAFT_2332 at 498.807 kb on - strand, within B158DRAFT_2332
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Doxycycline hyclate 0.0625 mg/ml remove 495,895 - -1.8 496,003 + +1.5 496,058 + +3.4 496,309 + +0.7 496,309 + +1.3 496,309 + +0.9 496,309 + +0.3 496,323 + -0.6 496,323 + -0.4 496,353 + +0.9 497,201 + B158DRAFT_2330 0.45 -0.5 497,450 + B158DRAFT_2330 0.66 +2.6 497,606 + B158DRAFT_2330 0.80 +1.1 497,606 + B158DRAFT_2330 0.80 +1.2 497,606 + B158DRAFT_2330 0.80 +1.0 497,625 + B158DRAFT_2330 0.81 +1.4 497,650 + B158DRAFT_2330 0.84 -0.7 497,791 + +2.5 497,791 + +1.9 497,791 + +2.3 497,791 + +2.0 497,791 + +1.9 497,799 + +2.4 498,540 - -0.5 498,719 + B158DRAFT_2332 0.29 -0.5 498,719 + B158DRAFT_2332 0.29 -1.4 498,719 + B158DRAFT_2332 0.29 -0.4 498,727 - B158DRAFT_2332 0.32 -0.0 498,727 - B158DRAFT_2332 0.32 +0.2 498,740 + B158DRAFT_2332 0.36 +0.2 498,748 - B158DRAFT_2332 0.39 -0.0 498,748 - B158DRAFT_2332 0.39 -0.2 498,780 - B158DRAFT_2332 0.49 +0.1 498,789 + B158DRAFT_2332 0.52 -0.3 498,789 + B158DRAFT_2332 0.52 +0.6 498,789 + B158DRAFT_2332 0.52 +0.2 498,789 + B158DRAFT_2332 0.52 -2.4 498,799 - B158DRAFT_2332 0.55 -0.2 498,807 - B158DRAFT_2332 0.58 -0.6
Or see this region's nucleotide sequence