Experiment: m.b. Doxycycline hyclate 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2027 and B158DRAFT_2028 are separated by 54 nucleotides B158DRAFT_2028 and B158DRAFT_2029 are separated by 57 nucleotides B158DRAFT_2029 and B158DRAFT_2030 are separated by 267 nucleotides
B158DRAFT_2027: B158DRAFT_2027 - RNA polymerase sigma factor, sigma-70 family, at 157,048 to 157,572
_2027
B158DRAFT_2028: B158DRAFT_2028 - hypothetical protein, at 157,627 to 158,199
_2028
B158DRAFT_2029: B158DRAFT_2029 - Inorganic pyrophosphatase, at 158,257 to 158,787
_2029
B158DRAFT_2030: B158DRAFT_2030 - vacuolar-type H(+)-translocating pyrophosphatase, at 159,055 to 161,058
_2030
Position (kb) 157
158
159 Strain fitness (log2 ratio) -2
-1
0
1
2 at 156.663 kb on - strand at 156.696 kb on + strand at 156.704 kb on + strand at 156.704 kb on + strand at 156.704 kb on + strand at 156.704 kb on + strand at 156.704 kb on + strand at 156.704 kb on + strand at 156.704 kb on + strand at 156.712 kb on - strand at 156.712 kb on - strand at 156.712 kb on - strand at 156.712 kb on - strand at 156.712 kb on - strand at 156.734 kb on + strand at 156.748 kb on + strand at 156.756 kb on + strand at 156.756 kb on + strand at 156.764 kb on - strand at 156.804 kb on + strand at 156.816 kb on + strand at 156.826 kb on + strand at 156.826 kb on + strand at 156.931 kb on + strand at 156.939 kb on - strand at 157.005 kb on - strand at 157.007 kb on - strand at 157.022 kb on - strand at 157.038 kb on - strand at 157.043 kb on - strand at 157.215 kb on + strand, within B158DRAFT_2027 at 157.295 kb on + strand, within B158DRAFT_2027 at 157.295 kb on + strand, within B158DRAFT_2027 at 157.368 kb on + strand, within B158DRAFT_2027 at 157.431 kb on + strand, within B158DRAFT_2027 at 157.439 kb on - strand, within B158DRAFT_2027 at 157.439 kb on - strand, within B158DRAFT_2027 at 157.460 kb on - strand, within B158DRAFT_2027 at 157.503 kb on + strand, within B158DRAFT_2027 at 157.515 kb on + strand, within B158DRAFT_2027 at 157.515 kb on + strand, within B158DRAFT_2027 at 157.520 kb on + strand at 157.523 kb on - strand at 157.525 kb on + strand at 157.525 kb on + strand at 157.525 kb on + strand at 157.533 kb on - strand at 157.543 kb on - strand at 157.550 kb on + strand at 157.705 kb on - strand, within B158DRAFT_2028 at 157.840 kb on + strand, within B158DRAFT_2028 at 157.840 kb on + strand, within B158DRAFT_2028 at 157.840 kb on + strand, within B158DRAFT_2028 at 157.848 kb on - strand, within B158DRAFT_2028 at 157.853 kb on + strand, within B158DRAFT_2028 at 157.910 kb on - strand, within B158DRAFT_2028 at 157.951 kb on + strand, within B158DRAFT_2028 at 157.995 kb on + strand, within B158DRAFT_2028 at 157.995 kb on + strand, within B158DRAFT_2028 at 158.003 kb on - strand, within B158DRAFT_2028 at 158.003 kb on - strand, within B158DRAFT_2028 at 158.028 kb on + strand, within B158DRAFT_2028 at 158.036 kb on - strand, within B158DRAFT_2028 at 158.036 kb on - strand, within B158DRAFT_2028 at 158.036 kb on - strand, within B158DRAFT_2028 at 158.042 kb on - strand, within B158DRAFT_2028 at 158.047 kb on - strand, within B158DRAFT_2028 at 158.047 kb on - strand, within B158DRAFT_2028 at 158.047 kb on - strand, within B158DRAFT_2028 at 158.076 kb on + strand, within B158DRAFT_2028 at 158.094 kb on + strand, within B158DRAFT_2028 at 158.113 kb on - strand, within B158DRAFT_2028 at 158.149 kb on + strand at 158.282 kb on - strand at 158.282 kb on - strand at 158.953 kb on + strand at 158.963 kb on + strand at 159.097 kb on + strand at 159.097 kb on + strand at 159.111 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Doxycycline hyclate 0.0625 mg/ml remove 156,663 - -0.0 156,696 + -0.3 156,704 + +0.1 156,704 + +0.5 156,704 + +0.5 156,704 + -0.5 156,704 + +0.2 156,704 + +0.2 156,704 + -0.1 156,712 - +0.2 156,712 - -0.9 156,712 - -0.2 156,712 - +0.1 156,712 - -0.4 156,734 + -0.6 156,748 + -0.2 156,756 + -2.7 156,756 + -2.7 156,764 - +0.0 156,804 + +0.1 156,816 + -1.0 156,826 + -0.1 156,826 + -0.5 156,931 + -0.7 156,939 - +0.1 157,005 - -0.5 157,007 - -0.3 157,022 - -0.2 157,038 - -0.3 157,043 - -1.0 157,215 + B158DRAFT_2027 0.32 -0.2 157,295 + B158DRAFT_2027 0.47 +0.6 157,295 + B158DRAFT_2027 0.47 -1.2 157,368 + B158DRAFT_2027 0.61 -0.0 157,431 + B158DRAFT_2027 0.73 -0.2 157,439 - B158DRAFT_2027 0.74 -0.6 157,439 - B158DRAFT_2027 0.74 -0.2 157,460 - B158DRAFT_2027 0.78 +0.3 157,503 + B158DRAFT_2027 0.87 +1.7 157,515 + B158DRAFT_2027 0.89 -0.5 157,515 + B158DRAFT_2027 0.89 +0.4 157,520 + +1.5 157,523 - -0.2 157,525 + -0.1 157,525 + -0.6 157,525 + -0.5 157,533 - +0.1 157,543 - -0.6 157,550 + -0.4 157,705 - B158DRAFT_2028 0.14 +0.7 157,840 + B158DRAFT_2028 0.37 -2.0 157,840 + B158DRAFT_2028 0.37 +0.4 157,840 + B158DRAFT_2028 0.37 +0.0 157,848 - B158DRAFT_2028 0.39 +0.2 157,853 + B158DRAFT_2028 0.39 -0.4 157,910 - B158DRAFT_2028 0.49 +0.7 157,951 + B158DRAFT_2028 0.57 +0.2 157,995 + B158DRAFT_2028 0.64 +1.7 157,995 + B158DRAFT_2028 0.64 +1.9 158,003 - B158DRAFT_2028 0.66 +2.1 158,003 - B158DRAFT_2028 0.66 +1.8 158,028 + B158DRAFT_2028 0.70 +2.0 158,036 - B158DRAFT_2028 0.71 +2.5 158,036 - B158DRAFT_2028 0.71 +2.3 158,036 - B158DRAFT_2028 0.71 +2.1 158,042 - B158DRAFT_2028 0.72 +2.0 158,047 - B158DRAFT_2028 0.73 +0.1 158,047 - B158DRAFT_2028 0.73 +1.7 158,047 - B158DRAFT_2028 0.73 +1.3 158,076 + B158DRAFT_2028 0.78 +1.8 158,094 + B158DRAFT_2028 0.82 +1.9 158,113 - B158DRAFT_2028 0.85 +2.4 158,149 + +1.9 158,282 - +0.3 158,282 - -0.0 158,953 + +0.0 158,963 + -0.2 159,097 + -0.3 159,097 + -0.1 159,111 - -0.7
Or see this region's nucleotide sequence