Experiment: m.b. Doxycycline hyclate 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1805 and B158DRAFT_1806 are separated by 70 nucleotides B158DRAFT_1806 and B158DRAFT_1807 are separated by 82 nucleotides
B158DRAFT_1805: B158DRAFT_1805 - NAD-dependent aldehyde dehydrogenases, at 1,903,352 to 1,904,872
_1805
B158DRAFT_1806: B158DRAFT_1806 - Glutamate dehydrogenase/leucine dehydrogenase, at 1,904,943 to 1,905,980
_1806
B158DRAFT_1807: B158DRAFT_1807 - hypothetical protein, at 1,906,063 to 1,907,289
_1807
Position (kb) 1904
1905
1906 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 1904.174 kb on + strand, within B158DRAFT_1805 at 1904.211 kb on + strand, within B158DRAFT_1805 at 1904.223 kb on + strand, within B158DRAFT_1805 at 1904.404 kb on + strand, within B158DRAFT_1805 at 1904.503 kb on + strand, within B158DRAFT_1805 at 1904.521 kb on + strand, within B158DRAFT_1805 at 1904.596 kb on + strand, within B158DRAFT_1805 at 1904.611 kb on + strand, within B158DRAFT_1805 at 1904.789 kb on + strand at 1904.789 kb on + strand at 1904.818 kb on + strand at 1904.818 kb on + strand at 1904.818 kb on + strand at 1904.818 kb on + strand at 1904.818 kb on + strand at 1904.866 kb on + strand at 1906.068 kb on - strand at 1906.106 kb on - strand at 1906.124 kb on - strand at 1906.189 kb on + strand, within B158DRAFT_1807 at 1906.213 kb on - strand, within B158DRAFT_1807 at 1906.359 kb on + strand, within B158DRAFT_1807 at 1906.359 kb on + strand, within B158DRAFT_1807 at 1906.369 kb on - strand, within B158DRAFT_1807 at 1906.398 kb on - strand, within B158DRAFT_1807 at 1906.505 kb on + strand, within B158DRAFT_1807 at 1906.505 kb on + strand, within B158DRAFT_1807 at 1906.513 kb on - strand, within B158DRAFT_1807 at 1906.515 kb on + strand, within B158DRAFT_1807 at 1906.581 kb on + strand, within B158DRAFT_1807 at 1906.589 kb on + strand, within B158DRAFT_1807 at 1906.597 kb on - strand, within B158DRAFT_1807 at 1906.652 kb on - strand, within B158DRAFT_1807 at 1906.835 kb on + strand, within B158DRAFT_1807 at 1906.865 kb on + strand, within B158DRAFT_1807 at 1906.865 kb on + strand, within B158DRAFT_1807 at 1906.896 kb on - strand, within B158DRAFT_1807 at 1906.916 kb on + strand, within B158DRAFT_1807 at 1906.916 kb on + strand, within B158DRAFT_1807 at 1906.924 kb on - strand, within B158DRAFT_1807 at 1906.930 kb on + strand, within B158DRAFT_1807 at 1906.937 kb on + strand, within B158DRAFT_1807
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Doxycycline hyclate 0.0625 mg/ml remove 1,904,174 + B158DRAFT_1805 0.54 -3.1 1,904,211 + B158DRAFT_1805 0.56 -3.7 1,904,223 + B158DRAFT_1805 0.57 -0.1 1,904,404 + B158DRAFT_1805 0.69 -2.4 1,904,503 + B158DRAFT_1805 0.76 -1.7 1,904,521 + B158DRAFT_1805 0.77 -2.8 1,904,596 + B158DRAFT_1805 0.82 -4.4 1,904,611 + B158DRAFT_1805 0.83 -4.1 1,904,789 + -1.9 1,904,789 + -4.3 1,904,818 + -3.1 1,904,818 + -3.1 1,904,818 + -3.9 1,904,818 + -2.9 1,904,818 + -3.7 1,904,866 + -1.1 1,906,068 - +0.0 1,906,106 - -0.3 1,906,124 - -0.7 1,906,189 + B158DRAFT_1807 0.10 -0.9 1,906,213 - B158DRAFT_1807 0.12 -0.7 1,906,359 + B158DRAFT_1807 0.24 -0.6 1,906,359 + B158DRAFT_1807 0.24 -0.4 1,906,369 - B158DRAFT_1807 0.25 -0.3 1,906,398 - B158DRAFT_1807 0.27 -0.1 1,906,505 + B158DRAFT_1807 0.36 -0.8 1,906,505 + B158DRAFT_1807 0.36 -1.3 1,906,513 - B158DRAFT_1807 0.37 -0.3 1,906,515 + B158DRAFT_1807 0.37 -0.8 1,906,581 + B158DRAFT_1807 0.42 -0.9 1,906,589 + B158DRAFT_1807 0.43 +0.0 1,906,597 - B158DRAFT_1807 0.44 -0.4 1,906,652 - B158DRAFT_1807 0.48 -0.8 1,906,835 + B158DRAFT_1807 0.63 -0.4 1,906,865 + B158DRAFT_1807 0.65 -0.3 1,906,865 + B158DRAFT_1807 0.65 -0.5 1,906,896 - B158DRAFT_1807 0.68 -1.0 1,906,916 + B158DRAFT_1807 0.70 +0.1 1,906,916 + B158DRAFT_1807 0.70 -0.3 1,906,924 - B158DRAFT_1807 0.70 -0.6 1,906,930 + B158DRAFT_1807 0.71 -0.4 1,906,937 + B158DRAFT_1807 0.71 -1.1
Or see this region's nucleotide sequence