Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1567

Experiment: m.b. Doxycycline hyclate 0.0625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1566 and B158DRAFT_1567 are separated by 21 nucleotidesB158DRAFT_1567 and B158DRAFT_1568 overlap by 4 nucleotides B158DRAFT_1566: B158DRAFT_1566 - Na+-dependent transporters of the SNF family, at 1,622,813 to 1,624,213 _1566 B158DRAFT_1567: B158DRAFT_1567 - Imidazolonepropionase and related amidohydrolases, at 1,624,235 to 1,625,662 _1567 B158DRAFT_1568: B158DRAFT_1568 - Imidazolonepropionase and related amidohydrolases, at 1,625,659 to 1,626,963 _1568 Position (kb) 1624 1625 1626Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 1623.245 kb on - strand, within B158DRAFT_1566at 1623.326 kb on - strand, within B158DRAFT_1566at 1623.436 kb on + strand, within B158DRAFT_1566at 1623.444 kb on - strand, within B158DRAFT_1566at 1623.446 kb on + strand, within B158DRAFT_1566at 1623.446 kb on + strand, within B158DRAFT_1566at 1623.446 kb on + strand, within B158DRAFT_1566at 1623.446 kb on + strand, within B158DRAFT_1566at 1623.446 kb on + strand, within B158DRAFT_1566at 1623.446 kb on + strand, within B158DRAFT_1566at 1623.446 kb on + strand, within B158DRAFT_1566at 1623.446 kb on + strand, within B158DRAFT_1566at 1623.446 kb on + strand, within B158DRAFT_1566at 1623.446 kb on + strand, within B158DRAFT_1566at 1623.446 kb on + strand, within B158DRAFT_1566at 1623.446 kb on + strand, within B158DRAFT_1566at 1623.446 kb on + strand, within B158DRAFT_1566at 1623.446 kb on + strand, within B158DRAFT_1566at 1623.446 kb on + strand, within B158DRAFT_1566at 1623.446 kb on + strand, within B158DRAFT_1566at 1623.446 kb on + strand, within B158DRAFT_1566at 1623.446 kb on + strand, within B158DRAFT_1566at 1623.446 kb on + strand, within B158DRAFT_1566at 1623.454 kb on - strand, within B158DRAFT_1566at 1623.454 kb on - strand, within B158DRAFT_1566at 1623.454 kb on - strand, within B158DRAFT_1566at 1623.454 kb on - strand, within B158DRAFT_1566at 1623.454 kb on - strand, within B158DRAFT_1566at 1623.454 kb on - strand, within B158DRAFT_1566at 1623.454 kb on - strand, within B158DRAFT_1566at 1623.454 kb on - strand, within B158DRAFT_1566at 1623.454 kb on - strand, within B158DRAFT_1566at 1623.454 kb on - strand, within B158DRAFT_1566at 1623.454 kb on - strand, within B158DRAFT_1566at 1623.454 kb on - strand, within B158DRAFT_1566at 1623.454 kb on - strand, within B158DRAFT_1566at 1623.454 kb on - strand, within B158DRAFT_1566at 1623.454 kb on - strand, within B158DRAFT_1566at 1623.454 kb on - strand, within B158DRAFT_1566at 1623.497 kb on + strand, within B158DRAFT_1566at 1623.553 kb on - strand, within B158DRAFT_1566at 1623.587 kb on + strand, within B158DRAFT_1566at 1623.587 kb on + strand, within B158DRAFT_1566at 1623.595 kb on - strand, within B158DRAFT_1566at 1623.623 kb on - strand, within B158DRAFT_1566at 1623.656 kb on + strand, within B158DRAFT_1566at 1623.659 kb on - strand, within B158DRAFT_1566at 1623.694 kb on - strand, within B158DRAFT_1566at 1623.755 kb on + strand, within B158DRAFT_1566at 1623.762 kb on + strand, within B158DRAFT_1566at 1623.763 kb on - strand, within B158DRAFT_1566at 1623.958 kb on - strand, within B158DRAFT_1566at 1624.009 kb on - strand, within B158DRAFT_1566at 1624.032 kb on + strand, within B158DRAFT_1566at 1624.135 kb on + strandat 1624.143 kb on - strandat 1624.143 kb on - strandat 1624.148 kb on - strandat 1624.264 kb on + strandat 1624.266 kb on + strandat 1624.266 kb on + strandat 1624.274 kb on - strandat 1624.274 kb on - strandat 1624.279 kb on + strandat 1624.282 kb on - strandat 1624.342 kb on + strandat 1624.342 kb on + strandat 1624.342 kb on + strandat 1624.350 kb on - strandat 1624.350 kb on - strandat 1624.350 kb on - strandat 1624.350 kb on - strandat 1624.350 kb on - strandat 1624.373 kb on - strandat 1624.442 kb on - strand, within B158DRAFT_1567at 1624.506 kb on - strand, within B158DRAFT_1567at 1624.537 kb on + strand, within B158DRAFT_1567at 1624.537 kb on + strand, within B158DRAFT_1567at 1624.551 kb on + strand, within B158DRAFT_1567at 1624.559 kb on - strand, within B158DRAFT_1567at 1624.559 kb on - strand, within B158DRAFT_1567at 1624.559 kb on - strand, within B158DRAFT_1567at 1624.577 kb on + strand, within B158DRAFT_1567at 1624.583 kb on + strand, within B158DRAFT_1567at 1624.609 kb on + strand, within B158DRAFT_1567at 1624.619 kb on - strand, within B158DRAFT_1567at 1624.635 kb on + strand, within B158DRAFT_1567at 1624.654 kb on + strand, within B158DRAFT_1567at 1624.654 kb on + strand, within B158DRAFT_1567at 1624.662 kb on - strand, within B158DRAFT_1567at 1624.662 kb on - strand, within B158DRAFT_1567at 1624.677 kb on + strand, within B158DRAFT_1567at 1624.685 kb on - strand, within B158DRAFT_1567at 1624.834 kb on - strand, within B158DRAFT_1567at 1624.861 kb on + strand, within B158DRAFT_1567at 1624.904 kb on + strand, within B158DRAFT_1567at 1624.904 kb on + strand, within B158DRAFT_1567at 1624.971 kb on - strand, within B158DRAFT_1567at 1624.973 kb on + strand, within B158DRAFT_1567at 1624.981 kb on - strand, within B158DRAFT_1567at 1625.040 kb on + strand, within B158DRAFT_1567at 1625.048 kb on - strand, within B158DRAFT_1567at 1625.117 kb on + strand, within B158DRAFT_1567at 1625.120 kb on + strand, within B158DRAFT_1567at 1625.156 kb on + strand, within B158DRAFT_1567at 1625.156 kb on + strand, within B158DRAFT_1567at 1625.164 kb on - strand, within B158DRAFT_1567at 1625.215 kb on - strand, within B158DRAFT_1567at 1625.222 kb on - strand, within B158DRAFT_1567at 1625.231 kb on - strand, within B158DRAFT_1567at 1625.285 kb on + strand, within B158DRAFT_1567at 1625.290 kb on + strand, within B158DRAFT_1567at 1625.338 kb on + strand, within B158DRAFT_1567at 1625.359 kb on - strand, within B158DRAFT_1567at 1625.363 kb on + strand, within B158DRAFT_1567at 1625.421 kb on + strand, within B158DRAFT_1567at 1625.429 kb on - strand, within B158DRAFT_1567at 1625.458 kb on - strand, within B158DRAFT_1567at 1625.461 kb on - strand, within B158DRAFT_1567at 1625.467 kb on + strand, within B158DRAFT_1567at 1625.510 kb on + strand, within B158DRAFT_1567at 1625.514 kb on + strand, within B158DRAFT_1567at 1625.615 kb on + strandat 1625.623 kb on - strandat 1625.623 kb on - strandat 1625.648 kb on - strandat 1625.650 kb on - strandat 1625.650 kb on - strandat 1625.671 kb on - strandat 1625.685 kb on + strandat 1625.731 kb on + strandat 1625.732 kb on + strandat 1625.739 kb on - strandat 1625.843 kb on - strand, within B158DRAFT_1568at 1625.892 kb on + strand, within B158DRAFT_1568at 1625.904 kb on - strand, within B158DRAFT_1568at 1625.942 kb on - strand, within B158DRAFT_1568at 1625.949 kb on + strand, within B158DRAFT_1568at 1625.957 kb on - strand, within B158DRAFT_1568at 1625.995 kb on + strand, within B158DRAFT_1568at 1626.004 kb on + strand, within B158DRAFT_1568at 1626.009 kb on + strand, within B158DRAFT_1568at 1626.024 kb on + strand, within B158DRAFT_1568at 1626.083 kb on + strand, within B158DRAFT_1568at 1626.094 kb on + strand, within B158DRAFT_1568at 1626.094 kb on + strand, within B158DRAFT_1568at 1626.094 kb on + strand, within B158DRAFT_1568at 1626.094 kb on + strand, within B158DRAFT_1568at 1626.102 kb on - strand, within B158DRAFT_1568at 1626.102 kb on - strand, within B158DRAFT_1568at 1626.102 kb on - strand, within B158DRAFT_1568at 1626.102 kb on - strand, within B158DRAFT_1568at 1626.102 kb on - strand, within B158DRAFT_1568at 1626.104 kb on + strand, within B158DRAFT_1568at 1626.104 kb on + strand, within B158DRAFT_1568at 1626.112 kb on - strand, within B158DRAFT_1568at 1626.148 kb on + strand, within B158DRAFT_1568at 1626.153 kb on + strand, within B158DRAFT_1568at 1626.156 kb on - strand, within B158DRAFT_1568at 1626.156 kb on - strand, within B158DRAFT_1568at 1626.161 kb on - strand, within B158DRAFT_1568at 1626.227 kb on + strand, within B158DRAFT_1568at 1626.263 kb on - strand, within B158DRAFT_1568at 1626.263 kb on - strand, within B158DRAFT_1568at 1626.281 kb on - strand, within B158DRAFT_1568at 1626.346 kb on - strand, within B158DRAFT_1568at 1626.357 kb on + strand, within B158DRAFT_1568at 1626.375 kb on - strand, within B158DRAFT_1568at 1626.393 kb on + strand, within B158DRAFT_1568at 1626.393 kb on + strand, within B158DRAFT_1568at 1626.393 kb on + strand, within B158DRAFT_1568at 1626.401 kb on - strand, within B158DRAFT_1568at 1626.401 kb on - strand, within B158DRAFT_1568at 1626.401 kb on - strand, within B158DRAFT_1568at 1626.401 kb on - strand, within B158DRAFT_1568at 1626.401 kb on - strand, within B158DRAFT_1568at 1626.401 kb on - strand, within B158DRAFT_1568at 1626.401 kb on - strand, within B158DRAFT_1568at 1626.453 kb on - strand, within B158DRAFT_1568at 1626.471 kb on - strand, within B158DRAFT_1568at 1626.471 kb on - strand, within B158DRAFT_1568at 1626.520 kb on + strand, within B158DRAFT_1568at 1626.528 kb on - strand, within B158DRAFT_1568at 1626.530 kb on + strand, within B158DRAFT_1568at 1626.551 kb on - strand, within B158DRAFT_1568at 1626.642 kb on - strand, within B158DRAFT_1568at 1626.653 kb on + strand, within B158DRAFT_1568

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Doxycycline hyclate 0.0625 mg/ml
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1,623,245 - B158DRAFT_1566 0.31 -0.2
1,623,326 - B158DRAFT_1566 0.37 -0.6
1,623,436 + B158DRAFT_1566 0.44 -0.5
1,623,444 - B158DRAFT_1566 0.45 -1.0
1,623,446 + B158DRAFT_1566 0.45 -0.8
1,623,446 + B158DRAFT_1566 0.45 -0.9
1,623,446 + B158DRAFT_1566 0.45 -1.4
1,623,446 + B158DRAFT_1566 0.45 -1.3
1,623,446 + B158DRAFT_1566 0.45 -1.0
1,623,446 + B158DRAFT_1566 0.45 -3.5
1,623,446 + B158DRAFT_1566 0.45 -0.1
1,623,446 + B158DRAFT_1566 0.45 -0.5
1,623,446 + B158DRAFT_1566 0.45 -0.7
1,623,446 + B158DRAFT_1566 0.45 -0.9
1,623,446 + B158DRAFT_1566 0.45 -4.3
1,623,446 + B158DRAFT_1566 0.45 -1.1
1,623,446 + B158DRAFT_1566 0.45 -1.0
1,623,446 + B158DRAFT_1566 0.45 -1.2
1,623,446 + B158DRAFT_1566 0.45 -0.8
1,623,446 + B158DRAFT_1566 0.45 -0.1
1,623,446 + B158DRAFT_1566 0.45 -1.7
1,623,446 + B158DRAFT_1566 0.45 -0.6
1,623,446 + B158DRAFT_1566 0.45 +0.3
1,623,454 - B158DRAFT_1566 0.46 -0.6
1,623,454 - B158DRAFT_1566 0.46 -0.8
1,623,454 - B158DRAFT_1566 0.46 -0.4
1,623,454 - B158DRAFT_1566 0.46 -1.7
1,623,454 - B158DRAFT_1566 0.46 -0.8
1,623,454 - B158DRAFT_1566 0.46 -1.2
1,623,454 - B158DRAFT_1566 0.46 -1.2
1,623,454 - B158DRAFT_1566 0.46 -1.6
1,623,454 - B158DRAFT_1566 0.46 -0.1
1,623,454 - B158DRAFT_1566 0.46 -0.1
1,623,454 - B158DRAFT_1566 0.46 -0.3
1,623,454 - B158DRAFT_1566 0.46 -2.5
1,623,454 - B158DRAFT_1566 0.46 -1.0
1,623,454 - B158DRAFT_1566 0.46 -1.1
1,623,454 - B158DRAFT_1566 0.46 -1.1
1,623,454 - B158DRAFT_1566 0.46 -1.1
1,623,497 + B158DRAFT_1566 0.49 -0.8
1,623,553 - B158DRAFT_1566 0.53 -0.9
1,623,587 + B158DRAFT_1566 0.55 -0.2
1,623,587 + B158DRAFT_1566 0.55 -0.5
1,623,595 - B158DRAFT_1566 0.56 -1.4
1,623,623 - B158DRAFT_1566 0.58 -2.7
1,623,656 + B158DRAFT_1566 0.60 -1.0
1,623,659 - B158DRAFT_1566 0.60 -1.1
1,623,694 - B158DRAFT_1566 0.63 -0.6
1,623,755 + B158DRAFT_1566 0.67 -0.5
1,623,762 + B158DRAFT_1566 0.68 +0.3
1,623,763 - B158DRAFT_1566 0.68 -0.9
1,623,958 - B158DRAFT_1566 0.82 -1.3
1,624,009 - B158DRAFT_1566 0.85 -1.4
1,624,032 + B158DRAFT_1566 0.87 -1.8
1,624,135 + -0.9
1,624,143 - -0.9
1,624,143 - -0.8
1,624,148 - -1.7
1,624,264 + -0.7
1,624,266 + -0.7
1,624,266 + -0.7
1,624,274 - -1.2
1,624,274 - -1.5
1,624,279 + -0.2
1,624,282 - -0.7
1,624,342 + -0.0
1,624,342 + -1.1
1,624,342 + -0.9
1,624,350 - -1.6
1,624,350 - -0.8
1,624,350 - -0.7
1,624,350 - -1.1
1,624,350 - +0.3
1,624,373 - -2.1
1,624,442 - B158DRAFT_1567 0.14 -0.5
1,624,506 - B158DRAFT_1567 0.19 -0.7
1,624,537 + B158DRAFT_1567 0.21 -0.7
1,624,537 + B158DRAFT_1567 0.21 -0.1
1,624,551 + B158DRAFT_1567 0.22 -0.3
1,624,559 - B158DRAFT_1567 0.23 -0.8
1,624,559 - B158DRAFT_1567 0.23 -0.7
1,624,559 - B158DRAFT_1567 0.23 -1.0
1,624,577 + B158DRAFT_1567 0.24 -1.2
1,624,583 + B158DRAFT_1567 0.24 -2.4
1,624,609 + B158DRAFT_1567 0.26 -0.5
1,624,619 - B158DRAFT_1567 0.27 -1.2
1,624,635 + B158DRAFT_1567 0.28 -0.1
1,624,654 + B158DRAFT_1567 0.29 +0.0
1,624,654 + B158DRAFT_1567 0.29 -0.7
1,624,662 - B158DRAFT_1567 0.30 -0.1
1,624,662 - B158DRAFT_1567 0.30 -0.4
1,624,677 + B158DRAFT_1567 0.31 -0.3
1,624,685 - B158DRAFT_1567 0.32 -1.5
1,624,834 - B158DRAFT_1567 0.42 -0.5
1,624,861 + B158DRAFT_1567 0.44 -0.7
1,624,904 + B158DRAFT_1567 0.47 -0.7
1,624,904 + B158DRAFT_1567 0.47 -0.1
1,624,971 - B158DRAFT_1567 0.52 -0.7
1,624,973 + B158DRAFT_1567 0.52 -0.5
1,624,981 - B158DRAFT_1567 0.52 -0.7
1,625,040 + B158DRAFT_1567 0.56 -1.6
1,625,048 - B158DRAFT_1567 0.57 -0.9
1,625,117 + B158DRAFT_1567 0.62 -0.1
1,625,120 + B158DRAFT_1567 0.62 -0.9
1,625,156 + B158DRAFT_1567 0.64 -1.0
1,625,156 + B158DRAFT_1567 0.64 -1.1
1,625,164 - B158DRAFT_1567 0.65 -1.3
1,625,215 - B158DRAFT_1567 0.69 -1.8
1,625,222 - B158DRAFT_1567 0.69 +0.2
1,625,231 - B158DRAFT_1567 0.70 -0.8
1,625,285 + B158DRAFT_1567 0.74 -0.5
1,625,290 + B158DRAFT_1567 0.74 -0.4
1,625,338 + B158DRAFT_1567 0.77 -0.5
1,625,359 - B158DRAFT_1567 0.79 -0.1
1,625,363 + B158DRAFT_1567 0.79 -0.9
1,625,421 + B158DRAFT_1567 0.83 +0.3
1,625,429 - B158DRAFT_1567 0.84 -0.3
1,625,458 - B158DRAFT_1567 0.86 +0.1
1,625,461 - B158DRAFT_1567 0.86 -0.3
1,625,467 + B158DRAFT_1567 0.86 -0.5
1,625,510 + B158DRAFT_1567 0.89 -0.5
1,625,514 + B158DRAFT_1567 0.90 -1.1
1,625,615 + -0.7
1,625,623 - -0.1
1,625,623 - -0.7
1,625,648 - -1.0
1,625,650 - -1.7
1,625,650 - -1.9
1,625,671 - -1.0
1,625,685 + -0.8
1,625,731 + -0.6
1,625,732 + -0.4
1,625,739 - -0.8
1,625,843 - B158DRAFT_1568 0.14 -0.9
1,625,892 + B158DRAFT_1568 0.18 -1.4
1,625,904 - B158DRAFT_1568 0.19 -1.1
1,625,942 - B158DRAFT_1568 0.22 -0.6
1,625,949 + B158DRAFT_1568 0.22 -1.3
1,625,957 - B158DRAFT_1568 0.23 -1.0
1,625,995 + B158DRAFT_1568 0.26 -0.8
1,626,004 + B158DRAFT_1568 0.26 +0.7
1,626,009 + B158DRAFT_1568 0.27 -0.9
1,626,024 + B158DRAFT_1568 0.28 -1.3
1,626,083 + B158DRAFT_1568 0.32 -0.4
1,626,094 + B158DRAFT_1568 0.33 -0.3
1,626,094 + B158DRAFT_1568 0.33 -0.5
1,626,094 + B158DRAFT_1568 0.33 -1.2
1,626,094 + B158DRAFT_1568 0.33 -0.5
1,626,102 - B158DRAFT_1568 0.34 -1.3
1,626,102 - B158DRAFT_1568 0.34 +0.0
1,626,102 - B158DRAFT_1568 0.34 -1.3
1,626,102 - B158DRAFT_1568 0.34 -1.1
1,626,102 - B158DRAFT_1568 0.34 +0.2
1,626,104 + B158DRAFT_1568 0.34 +0.2
1,626,104 + B158DRAFT_1568 0.34 -0.7
1,626,112 - B158DRAFT_1568 0.35 -1.4
1,626,148 + B158DRAFT_1568 0.37 -0.4
1,626,153 + B158DRAFT_1568 0.38 -0.8
1,626,156 - B158DRAFT_1568 0.38 -0.7
1,626,156 - B158DRAFT_1568 0.38 -0.8
1,626,161 - B158DRAFT_1568 0.38 -1.2
1,626,227 + B158DRAFT_1568 0.44 -0.9
1,626,263 - B158DRAFT_1568 0.46 -0.0
1,626,263 - B158DRAFT_1568 0.46 +0.3
1,626,281 - B158DRAFT_1568 0.48 -1.5
1,626,346 - B158DRAFT_1568 0.53 -0.8
1,626,357 + B158DRAFT_1568 0.53 -0.6
1,626,375 - B158DRAFT_1568 0.55 -0.5
1,626,393 + B158DRAFT_1568 0.56 -0.7
1,626,393 + B158DRAFT_1568 0.56 -0.7
1,626,393 + B158DRAFT_1568 0.56 -0.0
1,626,401 - B158DRAFT_1568 0.57 -0.1
1,626,401 - B158DRAFT_1568 0.57 -1.4
1,626,401 - B158DRAFT_1568 0.57 -0.7
1,626,401 - B158DRAFT_1568 0.57 -0.9
1,626,401 - B158DRAFT_1568 0.57 -2.3
1,626,401 - B158DRAFT_1568 0.57 -2.3
1,626,401 - B158DRAFT_1568 0.57 -0.8
1,626,453 - B158DRAFT_1568 0.61 -3.0
1,626,471 - B158DRAFT_1568 0.62 -1.7
1,626,471 - B158DRAFT_1568 0.62 -1.6
1,626,520 + B158DRAFT_1568 0.66 -1.1
1,626,528 - B158DRAFT_1568 0.67 -0.9
1,626,530 + B158DRAFT_1568 0.67 -0.8
1,626,551 - B158DRAFT_1568 0.68 +0.0
1,626,642 - B158DRAFT_1568 0.75 -1.4
1,626,653 + B158DRAFT_1568 0.76 -0.2

Or see this region's nucleotide sequence