Experiment: m.b. Doxycycline hyclate 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1345 and B158DRAFT_1346 are separated by 60 nucleotides B158DRAFT_1346 and B158DRAFT_1347 are separated by 43 nucleotides
B158DRAFT_1345: B158DRAFT_1345 - aconitate hydratase 1/2-methylisocitrate dehydratase, Fe/S-dependent, at 1,388,535 to 1,391,123
_1345
B158DRAFT_1346: B158DRAFT_1346 - 2-methylaconitate cis-trans isomerase, at 1,391,184 to 1,392,398
_1346
B158DRAFT_1347: B158DRAFT_1347 - hypothetical protein, at 1,392,442 to 1,393,545
_1347
Position (kb) 1391
1392
1393 Strain fitness (log2 ratio) -1
0
1
2 at 1390.453 kb on - strand, within B158DRAFT_1345 at 1390.568 kb on + strand, within B158DRAFT_1345 at 1390.568 kb on + strand, within B158DRAFT_1345 at 1390.576 kb on - strand, within B158DRAFT_1345 at 1390.764 kb on + strand, within B158DRAFT_1345 at 1390.764 kb on + strand, within B158DRAFT_1345 at 1391.210 kb on - strand at 1391.217 kb on + strand at 1391.222 kb on + strand at 1391.306 kb on + strand, within B158DRAFT_1346 at 1391.353 kb on + strand, within B158DRAFT_1346 at 1391.361 kb on - strand, within B158DRAFT_1346 at 1391.777 kb on + strand, within B158DRAFT_1346 at 1391.890 kb on + strand, within B158DRAFT_1346 at 1392.112 kb on + strand, within B158DRAFT_1346 at 1392.587 kb on - strand, within B158DRAFT_1347 at 1392.594 kb on + strand, within B158DRAFT_1347 at 1392.660 kb on - strand, within B158DRAFT_1347 at 1392.726 kb on + strand, within B158DRAFT_1347 at 1392.920 kb on + strand, within B158DRAFT_1347 at 1392.948 kb on - strand, within B158DRAFT_1347 at 1393.063 kb on - strand, within B158DRAFT_1347 at 1393.153 kb on - strand, within B158DRAFT_1347 at 1393.153 kb on - strand, within B158DRAFT_1347 at 1393.155 kb on + strand, within B158DRAFT_1347 at 1393.155 kb on + strand, within B158DRAFT_1347 at 1393.155 kb on + strand, within B158DRAFT_1347 at 1393.160 kb on + strand, within B158DRAFT_1347 at 1393.168 kb on - strand, within B158DRAFT_1347 at 1393.168 kb on - strand, within B158DRAFT_1347 at 1393.382 kb on + strand, within B158DRAFT_1347
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Doxycycline hyclate 0.0625 mg/ml remove 1,390,453 - B158DRAFT_1345 0.74 +2.4 1,390,568 + B158DRAFT_1345 0.79 +2.2 1,390,568 + B158DRAFT_1345 0.79 +2.2 1,390,576 - B158DRAFT_1345 0.79 +1.1 1,390,764 + B158DRAFT_1345 0.86 +1.9 1,390,764 + B158DRAFT_1345 0.86 -1.0 1,391,210 - +1.9 1,391,217 + +2.6 1,391,222 + +0.6 1,391,306 + B158DRAFT_1346 0.10 +1.3 1,391,353 + B158DRAFT_1346 0.14 +0.2 1,391,361 - B158DRAFT_1346 0.15 +1.5 1,391,777 + B158DRAFT_1346 0.49 +1.9 1,391,890 + B158DRAFT_1346 0.58 +1.9 1,392,112 + B158DRAFT_1346 0.76 +1.2 1,392,587 - B158DRAFT_1347 0.13 -0.3 1,392,594 + B158DRAFT_1347 0.14 -0.2 1,392,660 - B158DRAFT_1347 0.20 -0.3 1,392,726 + B158DRAFT_1347 0.26 +0.5 1,392,920 + B158DRAFT_1347 0.43 +0.0 1,392,948 - B158DRAFT_1347 0.46 +2.2 1,393,063 - B158DRAFT_1347 0.56 -0.3 1,393,153 - B158DRAFT_1347 0.64 -0.2 1,393,153 - B158DRAFT_1347 0.64 -0.3 1,393,155 + B158DRAFT_1347 0.65 +0.3 1,393,155 + B158DRAFT_1347 0.65 -0.1 1,393,155 + B158DRAFT_1347 0.65 -0.7 1,393,160 + B158DRAFT_1347 0.65 -0.9 1,393,168 - B158DRAFT_1347 0.66 -1.5 1,393,168 - B158DRAFT_1347 0.66 +0.2 1,393,382 + B158DRAFT_1347 0.85 -0.1
Or see this region's nucleotide sequence