Experiment: m.b. Doxycycline hyclate 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1261 and B158DRAFT_1262 are separated by 31 nucleotides B158DRAFT_1262 and B158DRAFT_1263 overlap by 23 nucleotides B158DRAFT_1263 and B158DRAFT_1264 are separated by 96 nucleotides B158DRAFT_1264 and B158DRAFT_1265 are separated by 141 nucleotides B158DRAFT_1265 and B158DRAFT_1267 are separated by 452 nucleotides
B158DRAFT_1261: B158DRAFT_1261 - phenylalanyl-tRNA synthetase beta subunit (EC 6.1.1.20), at 1,298,136 to 1,300,514
_1261
B158DRAFT_1262: B158DRAFT_1262 - integration host factor, alpha subunit, at 1,300,546 to 1,300,848
_1262
B158DRAFT_1263: B158DRAFT_1263 - Predicted transcriptional regulators, at 1,300,826 to 1,301,176
_1263
B158DRAFT_1264: B158DRAFT_1264 - tRNA_Pro_GGG, at 1,301,273 to 1,301,349
_1264
B158DRAFT_1265: B158DRAFT_1265 - tRNA_Ser_TGA, at 1,301,491 to 1,301,581
_1265
B158DRAFT_1267: B158DRAFT_1267 - Superfamily II DNA/RNA helicases, SNF2 family, at 1,302,034 to 1,304,916
_1267
Position (kb)
1301
1302 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 1300.588 kb on + strand, within B158DRAFT_1262 at 1300.622 kb on + strand, within B158DRAFT_1262 at 1300.644 kb on + strand, within B158DRAFT_1262 at 1300.644 kb on + strand, within B158DRAFT_1262 at 1300.725 kb on + strand, within B158DRAFT_1262 at 1300.732 kb on - strand, within B158DRAFT_1262 at 1300.784 kb on + strand, within B158DRAFT_1262 at 1300.785 kb on + strand, within B158DRAFT_1262 at 1300.793 kb on - strand, within B158DRAFT_1262 at 1300.826 kb on + strand at 1301.169 kb on - strand at 1301.179 kb on - strand at 1301.228 kb on + strand at 1301.230 kb on + strand at 1301.240 kb on - strand at 1301.287 kb on + strand, within B158DRAFT_1264 at 1301.287 kb on + strand, within B158DRAFT_1264 at 1301.293 kb on - strand, within B158DRAFT_1264 at 1301.300 kb on + strand, within B158DRAFT_1264 at 1301.308 kb on + strand, within B158DRAFT_1264 at 1301.310 kb on + strand, within B158DRAFT_1264 at 1301.316 kb on - strand, within B158DRAFT_1264 at 1301.318 kb on + strand, within B158DRAFT_1264 at 1301.326 kb on + strand, within B158DRAFT_1264 at 1301.326 kb on - strand, within B158DRAFT_1264 at 1301.326 kb on - strand, within B158DRAFT_1264 at 1301.326 kb on - strand, within B158DRAFT_1264 at 1301.335 kb on - strand, within B158DRAFT_1264 at 1301.396 kb on - strand at 1301.401 kb on - strand at 1301.648 kb on + strand at 1301.718 kb on - strand at 1301.741 kb on - strand at 1301.741 kb on - strand at 1301.818 kb on - strand at 1301.894 kb on + strand at 1301.941 kb on + strand at 1301.980 kb on - strand at 1302.039 kb on + strand at 1302.039 kb on + strand at 1302.044 kb on + strand at 1302.044 kb on + strand at 1302.068 kb on - strand at 1302.068 kb on - strand at 1302.103 kb on + strand at 1302.114 kb on + strand at 1302.122 kb on - strand at 1302.159 kb on + strand at 1302.167 kb on - strand at 1302.177 kb on - strand at 1302.177 kb on - strand at 1302.177 kb on - strand at 1302.183 kb on + strand at 1302.183 kb on + strand at 1302.183 kb on + strand at 1302.183 kb on + strand at 1302.183 kb on + strand at 1302.190 kb on + strand at 1302.191 kb on - strand at 1302.191 kb on - strand at 1302.191 kb on - strand at 1302.191 kb on - strand at 1302.191 kb on - strand at 1302.191 kb on - strand at 1302.191 kb on - strand at 1302.202 kb on + strand at 1302.202 kb on + strand at 1302.202 kb on + strand at 1302.210 kb on - strand at 1302.225 kb on - strand at 1302.239 kb on - strand at 1302.250 kb on + strand at 1302.250 kb on + strand at 1302.258 kb on - strand at 1302.258 kb on - strand at 1302.262 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Doxycycline hyclate 0.0625 mg/ml remove 1,300,588 + B158DRAFT_1262 0.14 +3.9 1,300,622 + B158DRAFT_1262 0.25 +2.8 1,300,644 + B158DRAFT_1262 0.32 +2.9 1,300,644 + B158DRAFT_1262 0.32 +1.7 1,300,725 + B158DRAFT_1262 0.59 +2.7 1,300,732 - B158DRAFT_1262 0.61 +2.8 1,300,784 + B158DRAFT_1262 0.79 +2.2 1,300,785 + B158DRAFT_1262 0.79 +1.9 1,300,793 - B158DRAFT_1262 0.82 +1.7 1,300,826 + -2.3 1,301,169 - -0.9 1,301,179 - -0.0 1,301,228 + -0.6 1,301,230 + -0.5 1,301,240 - -0.1 1,301,287 + B158DRAFT_1264 0.18 -0.1 1,301,287 + B158DRAFT_1264 0.18 -0.4 1,301,293 - B158DRAFT_1264 0.26 +0.1 1,301,300 + B158DRAFT_1264 0.35 +0.1 1,301,308 + B158DRAFT_1264 0.45 -0.5 1,301,310 + B158DRAFT_1264 0.48 -0.7 1,301,316 - B158DRAFT_1264 0.56 -0.6 1,301,318 + B158DRAFT_1264 0.58 -0.1 1,301,326 + B158DRAFT_1264 0.69 +0.2 1,301,326 - B158DRAFT_1264 0.69 +0.6 1,301,326 - B158DRAFT_1264 0.69 +0.7 1,301,326 - B158DRAFT_1264 0.69 -0.6 1,301,335 - B158DRAFT_1264 0.81 -0.2 1,301,396 - -0.3 1,301,401 - -0.1 1,301,648 + +0.1 1,301,718 - +0.1 1,301,741 - -0.1 1,301,741 - -0.3 1,301,818 - -0.1 1,301,894 + -0.2 1,301,941 + +0.2 1,301,980 - -0.3 1,302,039 + -0.2 1,302,039 + -0.2 1,302,044 + +0.5 1,302,044 + -0.6 1,302,068 - -0.5 1,302,068 - -0.1 1,302,103 + -0.0 1,302,114 + -0.2 1,302,122 - -0.0 1,302,159 + -0.6 1,302,167 - -1.0 1,302,177 - -0.1 1,302,177 - -0.2 1,302,177 - +0.0 1,302,183 + -0.1 1,302,183 + -0.8 1,302,183 + -0.3 1,302,183 + -1.2 1,302,183 + -0.1 1,302,190 + +0.1 1,302,191 - -0.1 1,302,191 - -0.0 1,302,191 - -0.1 1,302,191 - -0.2 1,302,191 - -0.1 1,302,191 - +0.2 1,302,191 - -0.1 1,302,202 + -0.1 1,302,202 + -0.7 1,302,202 + -0.5 1,302,210 - -0.7 1,302,225 - -0.4 1,302,239 - +0.2 1,302,250 + -0.4 1,302,250 + -0.6 1,302,258 - -0.2 1,302,258 - -1.1 1,302,262 + +0.2
Or see this region's nucleotide sequence