Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0622

Experiment: m.b. Doxycycline hyclate 0.0625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0621 and B158DRAFT_0622 are separated by 33 nucleotidesB158DRAFT_0622 and B158DRAFT_0623 overlap by 20 nucleotidesB158DRAFT_0623 and B158DRAFT_0624 are separated by 263 nucleotides B158DRAFT_0621: B158DRAFT_0621 - Deoxyribodipyrimidine photolyase, at 630,062 to 631,441 _0621 B158DRAFT_0622: B158DRAFT_0622 - hypothetical protein, at 631,475 to 632,071 _0622 B158DRAFT_0623: B158DRAFT_0623 - hypothetical protein, at 632,052 to 632,540 _0623 B158DRAFT_0624: B158DRAFT_0624 - Fatty-acid desaturase, at 632,804 to 633,715 _0624 Position (kb) 631 632 633Strain fitness (log2 ratio) -1 0 1at 630.501 kb on - strand, within B158DRAFT_0621at 630.507 kb on - strand, within B158DRAFT_0621at 630.507 kb on - strand, within B158DRAFT_0621at 630.565 kb on - strand, within B158DRAFT_0621at 630.590 kb on + strand, within B158DRAFT_0621at 630.652 kb on + strand, within B158DRAFT_0621at 630.652 kb on + strand, within B158DRAFT_0621at 630.660 kb on - strand, within B158DRAFT_0621at 630.753 kb on - strand, within B158DRAFT_0621at 630.809 kb on + strand, within B158DRAFT_0621at 630.837 kb on - strand, within B158DRAFT_0621at 631.050 kb on - strand, within B158DRAFT_0621at 631.380 kb on + strandat 631.422 kb on + strandat 631.522 kb on + strandat 631.585 kb on + strand, within B158DRAFT_0622at 631.593 kb on - strand, within B158DRAFT_0622at 631.593 kb on - strand, within B158DRAFT_0622at 631.612 kb on + strand, within B158DRAFT_0622at 631.612 kb on + strand, within B158DRAFT_0622at 631.612 kb on + strand, within B158DRAFT_0622at 631.619 kb on + strand, within B158DRAFT_0622at 631.620 kb on - strand, within B158DRAFT_0622at 631.632 kb on - strand, within B158DRAFT_0622at 631.632 kb on - strand, within B158DRAFT_0622at 631.678 kb on - strand, within B158DRAFT_0622at 631.680 kb on + strand, within B158DRAFT_0622at 631.680 kb on + strand, within B158DRAFT_0622at 631.680 kb on + strand, within B158DRAFT_0622at 631.680 kb on + strand, within B158DRAFT_0622at 631.680 kb on + strand, within B158DRAFT_0622at 631.680 kb on + strand, within B158DRAFT_0622at 631.680 kb on + strand, within B158DRAFT_0622at 631.680 kb on + strand, within B158DRAFT_0622at 631.680 kb on + strand, within B158DRAFT_0622at 631.680 kb on + strand, within B158DRAFT_0622at 631.680 kb on + strand, within B158DRAFT_0622at 631.680 kb on + strand, within B158DRAFT_0622at 631.680 kb on + strand, within B158DRAFT_0622at 631.680 kb on + strand, within B158DRAFT_0622at 631.688 kb on - strand, within B158DRAFT_0622at 631.688 kb on - strand, within B158DRAFT_0622at 631.688 kb on - strand, within B158DRAFT_0622at 631.688 kb on - strand, within B158DRAFT_0622at 631.725 kb on + strand, within B158DRAFT_0622at 631.725 kb on + strand, within B158DRAFT_0622at 631.725 kb on + strand, within B158DRAFT_0622at 631.761 kb on + strand, within B158DRAFT_0622at 631.862 kb on - strand, within B158DRAFT_0622at 631.862 kb on - strand, within B158DRAFT_0622at 631.862 kb on - strand, within B158DRAFT_0622at 631.862 kb on - strand, within B158DRAFT_0622at 631.862 kb on - strand, within B158DRAFT_0622at 631.959 kb on + strand, within B158DRAFT_0622at 631.959 kb on + strand, within B158DRAFT_0622at 631.959 kb on + strand, within B158DRAFT_0622at 631.959 kb on + strand, within B158DRAFT_0622at 631.962 kb on - strand, within B158DRAFT_0622at 631.965 kb on + strand, within B158DRAFT_0622at 631.967 kb on - strand, within B158DRAFT_0622at 631.967 kb on - strand, within B158DRAFT_0622at 631.968 kb on - strand, within B158DRAFT_0622at 631.973 kb on - strand, within B158DRAFT_0622at 631.973 kb on - strand, within B158DRAFT_0622at 631.975 kb on + strand, within B158DRAFT_0622at 631.994 kb on + strand, within B158DRAFT_0622at 632.047 kb on + strandat 632.242 kb on - strand, within B158DRAFT_0623at 632.242 kb on - strand, within B158DRAFT_0623at 632.266 kb on + strand, within B158DRAFT_0623at 632.295 kb on + strand, within B158DRAFT_0623at 632.325 kb on - strand, within B158DRAFT_0623at 632.331 kb on - strand, within B158DRAFT_0623at 632.359 kb on - strand, within B158DRAFT_0623at 632.428 kb on + strand, within B158DRAFT_0623at 632.428 kb on + strand, within B158DRAFT_0623at 632.436 kb on - strand, within B158DRAFT_0623at 632.851 kb on + strandat 632.856 kb on + strandat 632.856 kb on + strandat 632.866 kb on + strandat 632.906 kb on + strand, within B158DRAFT_0624at 632.906 kb on + strand, within B158DRAFT_0624at 632.947 kb on + strand, within B158DRAFT_0624at 632.947 kb on + strand, within B158DRAFT_0624at 632.955 kb on - strand, within B158DRAFT_0624at 632.955 kb on - strand, within B158DRAFT_0624at 632.955 kb on - strand, within B158DRAFT_0624

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Doxycycline hyclate 0.0625 mg/ml
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630,501 - B158DRAFT_0621 0.32 -0.9
630,507 - B158DRAFT_0621 0.32 -0.7
630,507 - B158DRAFT_0621 0.32 -0.2
630,565 - B158DRAFT_0621 0.36 +0.0
630,590 + B158DRAFT_0621 0.38 -0.3
630,652 + B158DRAFT_0621 0.43 -0.4
630,652 + B158DRAFT_0621 0.43 +0.3
630,660 - B158DRAFT_0621 0.43 +0.4
630,753 - B158DRAFT_0621 0.50 -0.0
630,809 + B158DRAFT_0621 0.54 -0.5
630,837 - B158DRAFT_0621 0.56 -0.1
631,050 - B158DRAFT_0621 0.72 -0.0
631,380 + -1.1
631,422 + -0.0
631,522 + -1.5
631,585 + B158DRAFT_0622 0.18 -0.3
631,593 - B158DRAFT_0622 0.20 -0.0
631,593 - B158DRAFT_0622 0.20 -0.0
631,612 + B158DRAFT_0622 0.23 -0.2
631,612 + B158DRAFT_0622 0.23 -0.5
631,612 + B158DRAFT_0622 0.23 +0.3
631,619 + B158DRAFT_0622 0.24 +0.5
631,620 - B158DRAFT_0622 0.24 +0.4
631,632 - B158DRAFT_0622 0.26 +0.3
631,632 - B158DRAFT_0622 0.26 +0.2
631,678 - B158DRAFT_0622 0.34 -0.0
631,680 + B158DRAFT_0622 0.34 +0.3
631,680 + B158DRAFT_0622 0.34 -0.2
631,680 + B158DRAFT_0622 0.34 -0.2
631,680 + B158DRAFT_0622 0.34 -0.5
631,680 + B158DRAFT_0622 0.34 -0.0
631,680 + B158DRAFT_0622 0.34 -0.3
631,680 + B158DRAFT_0622 0.34 -0.5
631,680 + B158DRAFT_0622 0.34 -0.4
631,680 + B158DRAFT_0622 0.34 -0.1
631,680 + B158DRAFT_0622 0.34 -0.3
631,680 + B158DRAFT_0622 0.34 +0.1
631,680 + B158DRAFT_0622 0.34 +0.4
631,680 + B158DRAFT_0622 0.34 +0.3
631,680 + B158DRAFT_0622 0.34 -0.3
631,688 - B158DRAFT_0622 0.36 -0.1
631,688 - B158DRAFT_0622 0.36 -0.1
631,688 - B158DRAFT_0622 0.36 +0.1
631,688 - B158DRAFT_0622 0.36 +0.3
631,725 + B158DRAFT_0622 0.42 -0.0
631,725 + B158DRAFT_0622 0.42 -0.1
631,725 + B158DRAFT_0622 0.42 -0.3
631,761 + B158DRAFT_0622 0.48 -0.1
631,862 - B158DRAFT_0622 0.65 -0.3
631,862 - B158DRAFT_0622 0.65 +0.2
631,862 - B158DRAFT_0622 0.65 -1.2
631,862 - B158DRAFT_0622 0.65 +0.3
631,862 - B158DRAFT_0622 0.65 +0.3
631,959 + B158DRAFT_0622 0.81 -0.3
631,959 + B158DRAFT_0622 0.81 -0.1
631,959 + B158DRAFT_0622 0.81 -0.1
631,959 + B158DRAFT_0622 0.81 +0.2
631,962 - B158DRAFT_0622 0.82 -0.2
631,965 + B158DRAFT_0622 0.82 +0.2
631,967 - B158DRAFT_0622 0.82 +0.3
631,967 - B158DRAFT_0622 0.82 -0.4
631,968 - B158DRAFT_0622 0.83 -0.2
631,973 - B158DRAFT_0622 0.83 -1.0
631,973 - B158DRAFT_0622 0.83 -0.3
631,975 + B158DRAFT_0622 0.84 +0.4
631,994 + B158DRAFT_0622 0.87 -0.0
632,047 + +0.2
632,242 - B158DRAFT_0623 0.39 +0.1
632,242 - B158DRAFT_0623 0.39 -0.4
632,266 + B158DRAFT_0623 0.44 -0.5
632,295 + B158DRAFT_0623 0.50 +0.1
632,325 - B158DRAFT_0623 0.56 +0.5
632,331 - B158DRAFT_0623 0.57 -0.2
632,359 - B158DRAFT_0623 0.63 -0.4
632,428 + B158DRAFT_0623 0.77 +0.3
632,428 + B158DRAFT_0623 0.77 -0.2
632,436 - B158DRAFT_0623 0.79 +0.5
632,851 + -0.4
632,856 + -0.2
632,856 + -0.5
632,866 + -0.1
632,906 + B158DRAFT_0624 0.11 +0.2
632,906 + B158DRAFT_0624 0.11 -0.0
632,947 + B158DRAFT_0624 0.16 -0.6
632,947 + B158DRAFT_0624 0.16 -0.0
632,955 - B158DRAFT_0624 0.17 +0.2
632,955 - B158DRAFT_0624 0.17 +0.6
632,955 - B158DRAFT_0624 0.17 -0.8

Or see this region's nucleotide sequence