Experiment: m.b. Doxycycline hyclate 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0612 and B158DRAFT_0613 overlap by 1 nucleotides B158DRAFT_0613 and B158DRAFT_0614 are separated by 30 nucleotides B158DRAFT_0614 and B158DRAFT_0615 are separated by 627 nucleotides
B158DRAFT_0612: B158DRAFT_0612 - putative oligopeptide transporter, OPT family, at 618,713 to 620,707
_0612
B158DRAFT_0613: B158DRAFT_0613 - Lysophospholipase L1 and related esterases, at 620,707 to 621,327
_0613
B158DRAFT_0614: B158DRAFT_0614 - dihydrodipicolinate reductase (EC 1.3.1.26), at 621,358 to 622,161
_0614
B158DRAFT_0615: B158DRAFT_0615 - carbamoyl-phosphate synthase, small subunit, at 622,789 to 623,955
_0615
Position (kb) 621
622
623 Strain fitness (log2 ratio) -2
-1
0
1 at 620.366 kb on + strand, within B158DRAFT_0612 at 620.404 kb on + strand, within B158DRAFT_0612 at 620.420 kb on - strand, within B158DRAFT_0612 at 620.425 kb on - strand, within B158DRAFT_0612 at 620.512 kb on - strand at 620.534 kb on + strand at 620.534 kb on + strand at 620.542 kb on - strand at 620.542 kb on - strand at 620.583 kb on - strand at 620.613 kb on + strand at 620.760 kb on + strand at 620.763 kb on + strand at 620.786 kb on + strand, within B158DRAFT_0613 at 620.809 kb on - strand, within B158DRAFT_0613 at 620.846 kb on + strand, within B158DRAFT_0613 at 620.854 kb on - strand, within B158DRAFT_0613 at 620.979 kb on + strand, within B158DRAFT_0613 at 620.979 kb on + strand, within B158DRAFT_0613 at 620.979 kb on + strand, within B158DRAFT_0613 at 620.979 kb on + strand, within B158DRAFT_0613 at 620.984 kb on + strand, within B158DRAFT_0613 at 620.984 kb on + strand, within B158DRAFT_0613 at 620.987 kb on - strand, within B158DRAFT_0613 at 620.992 kb on - strand, within B158DRAFT_0613 at 621.042 kb on + strand, within B158DRAFT_0613 at 621.053 kb on + strand, within B158DRAFT_0613 at 621.095 kb on + strand, within B158DRAFT_0613 at 621.095 kb on + strand, within B158DRAFT_0613 at 621.095 kb on + strand, within B158DRAFT_0613 at 621.095 kb on + strand, within B158DRAFT_0613 at 621.095 kb on + strand, within B158DRAFT_0613 at 621.095 kb on + strand, within B158DRAFT_0613 at 621.095 kb on + strand, within B158DRAFT_0613 at 621.095 kb on + strand, within B158DRAFT_0613 at 621.097 kb on + strand, within B158DRAFT_0613 at 621.216 kb on + strand, within B158DRAFT_0613 at 621.259 kb on + strand, within B158DRAFT_0613 at 621.259 kb on + strand, within B158DRAFT_0613 at 621.314 kb on + strand at 622.149 kb on - strand at 622.149 kb on - strand at 622.149 kb on - strand at 622.149 kb on - strand at 622.214 kb on - strand at 622.215 kb on - strand at 622.259 kb on - strand at 622.259 kb on - strand at 622.359 kb on - strand at 622.414 kb on - strand at 622.426 kb on + strand at 622.428 kb on - strand at 622.475 kb on + strand at 622.481 kb on - strand at 622.483 kb on - strand at 622.483 kb on - strand at 622.483 kb on - strand at 622.483 kb on - strand at 622.491 kb on - strand at 622.557 kb on + strand at 622.565 kb on - strand at 622.694 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Doxycycline hyclate 0.0625 mg/ml remove 620,366 + B158DRAFT_0612 0.83 -0.8 620,404 + B158DRAFT_0612 0.85 +1.0 620,420 - B158DRAFT_0612 0.86 -2.6 620,425 - B158DRAFT_0612 0.86 -1.9 620,512 - -1.2 620,534 + -0.2 620,534 + +0.3 620,542 - -1.2 620,542 - -2.0 620,583 - -1.6 620,613 + +0.7 620,760 + +0.3 620,763 + -0.3 620,786 + B158DRAFT_0613 0.13 +0.4 620,809 - B158DRAFT_0613 0.16 -1.6 620,846 + B158DRAFT_0613 0.22 -0.2 620,854 - B158DRAFT_0613 0.24 -0.2 620,979 + B158DRAFT_0613 0.44 +0.3 620,979 + B158DRAFT_0613 0.44 -0.1 620,979 + B158DRAFT_0613 0.44 -0.4 620,979 + B158DRAFT_0613 0.44 -0.1 620,984 + B158DRAFT_0613 0.45 -0.3 620,984 + B158DRAFT_0613 0.45 +0.3 620,987 - B158DRAFT_0613 0.45 -0.8 620,992 - B158DRAFT_0613 0.46 +0.6 621,042 + B158DRAFT_0613 0.54 -0.7 621,053 + B158DRAFT_0613 0.56 -0.2 621,095 + B158DRAFT_0613 0.62 +0.3 621,095 + B158DRAFT_0613 0.62 +0.2 621,095 + B158DRAFT_0613 0.62 -0.3 621,095 + B158DRAFT_0613 0.62 +0.3 621,095 + B158DRAFT_0613 0.62 -0.9 621,095 + B158DRAFT_0613 0.62 +0.4 621,095 + B158DRAFT_0613 0.62 -0.0 621,095 + B158DRAFT_0613 0.62 -0.8 621,097 + B158DRAFT_0613 0.63 -0.6 621,216 + B158DRAFT_0613 0.82 -0.6 621,259 + B158DRAFT_0613 0.89 -0.5 621,259 + B158DRAFT_0613 0.89 -0.1 621,314 + -0.5 622,149 - +0.2 622,149 - -0.2 622,149 - -0.6 622,149 - +0.9 622,214 - -0.1 622,215 - -1.0 622,259 - -1.1 622,259 - -1.6 622,359 - -0.5 622,414 - -0.1 622,426 + +0.1 622,428 - -0.6 622,475 + -0.3 622,481 - -0.3 622,483 - -0.1 622,483 - -0.1 622,483 - -0.0 622,483 - -0.1 622,491 - +0.0 622,557 + +0.1 622,565 - +0.3 622,694 - -0.1
Or see this region's nucleotide sequence