Experiment: m.b. Doxycycline hyclate 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0521 and B158DRAFT_0522 are separated by 2 nucleotides B158DRAFT_0522 and B158DRAFT_0524 are separated by 229 nucleotides B158DRAFT_0524 and B158DRAFT_0525 are separated by 184 nucleotides
B158DRAFT_0521: B158DRAFT_0521 - PEP-CTERM-box response regulator transcription factor, at 532,387 to 533,742
_0521
B158DRAFT_0522: B158DRAFT_0522 - hypothetical protein, at 533,745 to 534,035
_0522
B158DRAFT_0524: B158DRAFT_0524 - hypothetical protein, at 534,265 to 534,753
_0524
B158DRAFT_0525: B158DRAFT_0525 - ribose-5-phosphate isomerase (EC 5.3.1.6), at 534,938 to 535,597
_0525
Position (kb) 533
534
535 Strain fitness (log2 ratio) -2
-1
0
1 at 532.841 kb on + strand, within B158DRAFT_0521 at 532.841 kb on + strand, within B158DRAFT_0521 at 533.020 kb on - strand, within B158DRAFT_0521 at 533.020 kb on - strand, within B158DRAFT_0521 at 533.020 kb on - strand, within B158DRAFT_0521 at 533.030 kb on - strand, within B158DRAFT_0521 at 533.043 kb on - strand, within B158DRAFT_0521 at 533.108 kb on + strand, within B158DRAFT_0521 at 533.121 kb on - strand, within B158DRAFT_0521 at 533.149 kb on + strand, within B158DRAFT_0521 at 533.165 kb on - strand, within B158DRAFT_0521 at 533.200 kb on - strand, within B158DRAFT_0521 at 533.215 kb on - strand, within B158DRAFT_0521 at 533.215 kb on - strand, within B158DRAFT_0521 at 533.458 kb on + strand, within B158DRAFT_0521 at 533.458 kb on + strand, within B158DRAFT_0521 at 533.466 kb on - strand, within B158DRAFT_0521 at 533.520 kb on - strand, within B158DRAFT_0521 at 533.566 kb on + strand, within B158DRAFT_0521 at 533.672 kb on + strand at 533.686 kb on + strand at 533.694 kb on - strand at 533.701 kb on + strand at 533.701 kb on + strand at 533.709 kb on - strand at 533.709 kb on - strand at 533.711 kb on + strand at 533.727 kb on - strand at 533.738 kb on + strand at 533.783 kb on + strand, within B158DRAFT_0522 at 533.793 kb on + strand, within B158DRAFT_0522 at 533.836 kb on + strand, within B158DRAFT_0522 at 533.844 kb on - strand, within B158DRAFT_0522 at 533.888 kb on + strand, within B158DRAFT_0522 at 533.945 kb on - strand, within B158DRAFT_0522 at 534.024 kb on - strand at 534.044 kb on + strand at 534.044 kb on + strand at 534.052 kb on - strand at 534.065 kb on + strand at 534.073 kb on - strand at 534.115 kb on - strand at 534.295 kb on + strand at 534.295 kb on + strand at 534.295 kb on - strand at 534.297 kb on + strand at 534.305 kb on - strand at 534.305 kb on - strand at 534.305 kb on - strand at 534.305 kb on - strand at 534.305 kb on - strand at 534.479 kb on + strand, within B158DRAFT_0524 at 534.479 kb on + strand, within B158DRAFT_0524 at 534.487 kb on - strand, within B158DRAFT_0524 at 534.489 kb on - strand, within B158DRAFT_0524 at 534.494 kb on + strand, within B158DRAFT_0524 at 534.551 kb on + strand, within B158DRAFT_0524 at 534.659 kb on - strand, within B158DRAFT_0524 at 534.718 kb on + strand at 534.887 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Doxycycline hyclate 0.0625 mg/ml remove 532,841 + B158DRAFT_0521 0.33 -0.7 532,841 + B158DRAFT_0521 0.33 -0.6 533,020 - B158DRAFT_0521 0.47 -1.0 533,020 - B158DRAFT_0521 0.47 +0.6 533,020 - B158DRAFT_0521 0.47 -0.3 533,030 - B158DRAFT_0521 0.47 -0.8 533,043 - B158DRAFT_0521 0.48 +0.0 533,108 + B158DRAFT_0521 0.53 -0.8 533,121 - B158DRAFT_0521 0.54 -0.4 533,149 + B158DRAFT_0521 0.56 -0.3 533,165 - B158DRAFT_0521 0.57 -0.4 533,200 - B158DRAFT_0521 0.60 -1.4 533,215 - B158DRAFT_0521 0.61 -0.8 533,215 - B158DRAFT_0521 0.61 -0.4 533,458 + B158DRAFT_0521 0.79 -0.4 533,458 + B158DRAFT_0521 0.79 -1.2 533,466 - B158DRAFT_0521 0.80 -0.5 533,520 - B158DRAFT_0521 0.84 -0.8 533,566 + B158DRAFT_0521 0.87 -2.4 533,672 + -0.5 533,686 + -0.8 533,694 - -0.6 533,701 + -0.1 533,701 + -0.4 533,709 - -0.0 533,709 - -0.3 533,711 + -0.4 533,727 - -0.3 533,738 + +0.1 533,783 + B158DRAFT_0522 0.13 -0.4 533,793 + B158DRAFT_0522 0.16 +0.1 533,836 + B158DRAFT_0522 0.31 -0.1 533,844 - B158DRAFT_0522 0.34 +0.6 533,888 + B158DRAFT_0522 0.49 -0.2 533,945 - B158DRAFT_0522 0.69 -0.8 534,024 - -0.2 534,044 + -1.0 534,044 + -0.4 534,052 - -0.1 534,065 + -0.8 534,073 - +0.1 534,115 - -0.2 534,295 + +0.2 534,295 + -0.2 534,295 - +0.4 534,297 + +0.2 534,305 - -0.2 534,305 - +0.5 534,305 - +0.0 534,305 - +0.1 534,305 - +0.3 534,479 + B158DRAFT_0524 0.44 +0.1 534,479 + B158DRAFT_0524 0.44 +0.0 534,487 - B158DRAFT_0524 0.45 -0.3 534,489 - B158DRAFT_0524 0.46 -0.0 534,494 + B158DRAFT_0524 0.47 +0.6 534,551 + B158DRAFT_0524 0.58 -0.2 534,659 - B158DRAFT_0524 0.81 -0.2 534,718 + -1.1 534,887 + -0.0
Or see this region's nucleotide sequence