Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2328

Experiment: m.b. D-Cycloserine 0.03125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2327 and B158DRAFT_2328 are separated by 174 nucleotidesB158DRAFT_2328 and B158DRAFT_2329 are separated by 42 nucleotidesB158DRAFT_2329 and B158DRAFT_2330 are separated by 1 nucleotides B158DRAFT_2327: B158DRAFT_2327 - ribosomal protein S1, at 494,186 to 495,853 _2327 B158DRAFT_2328: B158DRAFT_2328 - integration host factor, beta subunit, at 496,028 to 496,330 _2328 B158DRAFT_2329: B158DRAFT_2329 - Predicted membrane protein, at 496,373 to 496,666 _2329 B158DRAFT_2330: B158DRAFT_2330 - Predicted N-acetylglucosaminyl transferase, at 496,668 to 497,843 _2330 Position (kb) 496 497Strain fitness (log2 ratio) -2 -1 0 1at 495.488 kb on - strand, within B158DRAFT_2327at 495.895 kb on - strandat 496.003 kb on + strandat 496.058 kb on + strandat 496.309 kb on + strandat 496.309 kb on + strandat 496.309 kb on + strandat 496.309 kb on + strandat 496.323 kb on + strandat 496.323 kb on + strandat 496.353 kb on + strandat 497.201 kb on + strand, within B158DRAFT_2330

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.03125 mg/ml
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495,488 - B158DRAFT_2327 0.78 +0.6
495,895 - -1.9
496,003 + -1.9
496,058 + +0.1
496,309 + -0.3
496,309 + -0.0
496,309 + -0.1
496,309 + -1.5
496,323 + -1.9
496,323 + -1.6
496,353 + -1.4
497,201 + B158DRAFT_2330 0.45 -2.0

Or see this region's nucleotide sequence