Experiment: m.b. D-Cycloserine 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1903 and B158DRAFT_1904 are separated by 69 nucleotides B158DRAFT_1904 and B158DRAFT_1905 are separated by 154 nucleotides B158DRAFT_1905 and B158DRAFT_1906 are separated by 14 nucleotides B158DRAFT_1906 and B158DRAFT_1907 are separated by 118 nucleotides
B158DRAFT_1903: B158DRAFT_1903 - hypothetical protein, at 40,153 to 40,542
_1903
B158DRAFT_1904: B158DRAFT_1904 - Predicted methyltransferase, at 40,612 to 41,241
_1904
B158DRAFT_1905: B158DRAFT_1905 - cation diffusion facilitator family transporter, at 41,396 to 42,322
_1905
B158DRAFT_1906: B158DRAFT_1906 - Response regulator containing a CheY-like receiver domain and a GGDEF domain, at 42,337 to 42,894
_1906
B158DRAFT_1907: B158DRAFT_1907 - Uncharacterized protein conserved in bacteria, at 43,013 to 43,621
_1907
Position (kb) 41
42
43 Strain fitness (log2 ratio) -2
-1
0
1 at 40.461 kb on + strand, within B158DRAFT_1903 at 40.474 kb on + strand, within B158DRAFT_1903 at 40.474 kb on - strand, within B158DRAFT_1903 at 40.511 kb on + strand at 40.550 kb on + strand at 40.570 kb on + strand at 40.585 kb on + strand at 40.585 kb on + strand at 40.585 kb on + strand at 40.593 kb on - strand at 40.593 kb on - strand at 40.593 kb on - strand at 40.637 kb on + strand at 40.645 kb on - strand at 40.658 kb on + strand at 40.658 kb on + strand at 40.666 kb on - strand at 40.666 kb on - strand at 40.666 kb on - strand at 40.666 kb on - strand at 40.736 kb on + strand, within B158DRAFT_1904 at 40.739 kb on - strand, within B158DRAFT_1904 at 40.763 kb on - strand, within B158DRAFT_1904 at 40.840 kb on - strand, within B158DRAFT_1904 at 40.854 kb on - strand, within B158DRAFT_1904 at 40.886 kb on - strand, within B158DRAFT_1904 at 40.914 kb on + strand, within B158DRAFT_1904 at 40.977 kb on + strand, within B158DRAFT_1904 at 41.024 kb on - strand, within B158DRAFT_1904 at 41.034 kb on + strand, within B158DRAFT_1904 at 41.037 kb on + strand, within B158DRAFT_1904 at 41.043 kb on - strand, within B158DRAFT_1904 at 41.056 kb on + strand, within B158DRAFT_1904 at 41.110 kb on + strand, within B158DRAFT_1904 at 41.112 kb on - strand, within B158DRAFT_1904 at 41.112 kb on - strand, within B158DRAFT_1904 at 41.118 kb on - strand, within B158DRAFT_1904 at 41.135 kb on + strand, within B158DRAFT_1904 at 41.135 kb on + strand, within B158DRAFT_1904 at 41.281 kb on - strand at 41.396 kb on - strand at 41.405 kb on + strand at 41.450 kb on + strand at 41.450 kb on + strand at 41.450 kb on + strand at 41.450 kb on + strand at 41.450 kb on + strand at 41.450 kb on + strand at 41.456 kb on - strand at 41.458 kb on - strand at 41.458 kb on - strand at 41.458 kb on - strand at 41.473 kb on + strand at 41.541 kb on + strand, within B158DRAFT_1905 at 41.541 kb on + strand, within B158DRAFT_1905 at 41.549 kb on - strand, within B158DRAFT_1905 at 41.569 kb on + strand, within B158DRAFT_1905 at 41.577 kb on - strand, within B158DRAFT_1905 at 41.599 kb on + strand, within B158DRAFT_1905 at 41.694 kb on - strand, within B158DRAFT_1905 at 41.748 kb on + strand, within B158DRAFT_1905 at 41.755 kb on + strand, within B158DRAFT_1905 at 41.763 kb on - strand, within B158DRAFT_1905 at 41.833 kb on + strand, within B158DRAFT_1905 at 41.836 kb on + strand, within B158DRAFT_1905 at 41.849 kb on - strand, within B158DRAFT_1905 at 41.859 kb on - strand, within B158DRAFT_1905 at 41.953 kb on + strand, within B158DRAFT_1905 at 41.953 kb on + strand, within B158DRAFT_1905 at 41.961 kb on - strand, within B158DRAFT_1905 at 41.961 kb on - strand, within B158DRAFT_1905 at 41.966 kb on - strand, within B158DRAFT_1905 at 42.057 kb on - strand, within B158DRAFT_1905 at 42.057 kb on - strand, within B158DRAFT_1905 at 42.089 kb on + strand, within B158DRAFT_1905 at 42.097 kb on - strand, within B158DRAFT_1905 at 42.097 kb on - strand, within B158DRAFT_1905 at 42.097 kb on - strand, within B158DRAFT_1905 at 42.097 kb on - strand, within B158DRAFT_1905 at 42.097 kb on - strand, within B158DRAFT_1905 at 42.109 kb on + strand, within B158DRAFT_1905 at 42.109 kb on + strand, within B158DRAFT_1905 at 42.109 kb on + strand, within B158DRAFT_1905 at 42.117 kb on - strand, within B158DRAFT_1905 at 42.135 kb on + strand, within B158DRAFT_1905 at 42.143 kb on - strand, within B158DRAFT_1905 at 42.153 kb on - strand, within B158DRAFT_1905 at 42.181 kb on + strand, within B158DRAFT_1905 at 42.189 kb on - strand, within B158DRAFT_1905 at 42.304 kb on - strand at 42.306 kb on + strand at 42.314 kb on - strand at 42.425 kb on + strand, within B158DRAFT_1906 at 42.425 kb on + strand, within B158DRAFT_1906 at 42.425 kb on + strand, within B158DRAFT_1906 at 42.425 kb on + strand, within B158DRAFT_1906 at 42.425 kb on + strand, within B158DRAFT_1906 at 42.425 kb on + strand, within B158DRAFT_1906 at 42.425 kb on + strand, within B158DRAFT_1906 at 42.425 kb on + strand, within B158DRAFT_1906 at 42.425 kb on + strand, within B158DRAFT_1906 at 42.425 kb on + strand, within B158DRAFT_1906 at 42.425 kb on + strand, within B158DRAFT_1906 at 42.425 kb on + strand, within B158DRAFT_1906 at 42.433 kb on - strand, within B158DRAFT_1906 at 42.433 kb on - strand, within B158DRAFT_1906 at 42.433 kb on - strand, within B158DRAFT_1906 at 42.433 kb on - strand, within B158DRAFT_1906 at 42.433 kb on - strand, within B158DRAFT_1906 at 42.433 kb on - strand, within B158DRAFT_1906 at 42.433 kb on - strand, within B158DRAFT_1906 at 42.433 kb on - strand, within B158DRAFT_1906 at 42.454 kb on - strand, within B158DRAFT_1906 at 42.470 kb on + strand, within B158DRAFT_1906 at 42.493 kb on + strand, within B158DRAFT_1906 at 42.549 kb on + strand, within B158DRAFT_1906 at 42.550 kb on - strand, within B158DRAFT_1906 at 42.557 kb on - strand, within B158DRAFT_1906 at 42.567 kb on + strand, within B158DRAFT_1906 at 42.588 kb on + strand, within B158DRAFT_1906 at 42.596 kb on - strand, within B158DRAFT_1906 at 42.608 kb on - strand, within B158DRAFT_1906 at 42.639 kb on + strand, within B158DRAFT_1906 at 42.642 kb on - strand, within B158DRAFT_1906 at 42.642 kb on - strand, within B158DRAFT_1906 at 42.730 kb on - strand, within B158DRAFT_1906 at 42.827 kb on + strand, within B158DRAFT_1906 at 42.835 kb on + strand, within B158DRAFT_1906 at 42.835 kb on + strand, within B158DRAFT_1906 at 42.835 kb on + strand, within B158DRAFT_1906 at 42.840 kb on + strand at 42.843 kb on - strand at 42.843 kb on - strand at 42.890 kb on - strand at 43.011 kb on - strand at 43.064 kb on + strand at 43.064 kb on + strand at 43.064 kb on + strand at 43.064 kb on + strand at 43.064 kb on + strand at 43.072 kb on - strand at 43.072 kb on - strand at 43.082 kb on - strand, within B158DRAFT_1907 at 43.113 kb on - strand, within B158DRAFT_1907 at 43.129 kb on + strand, within B158DRAFT_1907 at 43.160 kb on - strand, within B158DRAFT_1907 at 43.170 kb on - strand, within B158DRAFT_1907 at 43.236 kb on - strand, within B158DRAFT_1907 at 43.287 kb on - strand, within B158DRAFT_1907
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.03125 mg/ml remove 40,461 + B158DRAFT_1903 0.79 -1.1 40,474 + B158DRAFT_1903 0.82 -0.4 40,474 - B158DRAFT_1903 0.82 +0.3 40,511 + -0.0 40,550 + -0.5 40,570 + -0.2 40,585 + -0.4 40,585 + -0.3 40,585 + +0.2 40,593 - -0.1 40,593 - +0.1 40,593 - +0.5 40,637 + +0.0 40,645 - -0.7 40,658 + -0.5 40,658 + +0.2 40,666 - +0.2 40,666 - -0.4 40,666 - +0.4 40,666 - +0.2 40,736 + B158DRAFT_1904 0.20 -0.8 40,739 - B158DRAFT_1904 0.20 +0.1 40,763 - B158DRAFT_1904 0.24 +0.1 40,840 - B158DRAFT_1904 0.36 -0.2 40,854 - B158DRAFT_1904 0.38 -1.6 40,886 - B158DRAFT_1904 0.43 -0.8 40,914 + B158DRAFT_1904 0.48 -0.1 40,977 + B158DRAFT_1904 0.58 +0.2 41,024 - B158DRAFT_1904 0.65 -0.0 41,034 + B158DRAFT_1904 0.67 +0.2 41,037 + B158DRAFT_1904 0.67 -0.5 41,043 - B158DRAFT_1904 0.68 +0.1 41,056 + B158DRAFT_1904 0.70 +0.3 41,110 + B158DRAFT_1904 0.79 -2.2 41,112 - B158DRAFT_1904 0.79 -0.6 41,112 - B158DRAFT_1904 0.79 -0.2 41,118 - B158DRAFT_1904 0.80 -0.6 41,135 + B158DRAFT_1904 0.83 +0.6 41,135 + B158DRAFT_1904 0.83 +0.0 41,281 - +0.1 41,396 - -0.1 41,405 + +0.2 41,450 + +0.0 41,450 + -0.3 41,450 + -0.2 41,450 + +0.3 41,450 + -0.8 41,450 + +0.5 41,456 - -0.3 41,458 - -0.7 41,458 - +1.1 41,458 - -0.2 41,473 + -0.7 41,541 + B158DRAFT_1905 0.16 +0.1 41,541 + B158DRAFT_1905 0.16 +0.1 41,549 - B158DRAFT_1905 0.17 +0.2 41,569 + B158DRAFT_1905 0.19 -0.4 41,577 - B158DRAFT_1905 0.20 -0.1 41,599 + B158DRAFT_1905 0.22 -0.2 41,694 - B158DRAFT_1905 0.32 -0.6 41,748 + B158DRAFT_1905 0.38 +1.3 41,755 + B158DRAFT_1905 0.39 -0.4 41,763 - B158DRAFT_1905 0.40 -0.4 41,833 + B158DRAFT_1905 0.47 -0.7 41,836 + B158DRAFT_1905 0.47 +0.2 41,849 - B158DRAFT_1905 0.49 -0.1 41,859 - B158DRAFT_1905 0.50 -0.3 41,953 + B158DRAFT_1905 0.60 -0.2 41,953 + B158DRAFT_1905 0.60 -0.6 41,961 - B158DRAFT_1905 0.61 -0.1 41,961 - B158DRAFT_1905 0.61 -0.1 41,966 - B158DRAFT_1905 0.61 -0.3 42,057 - B158DRAFT_1905 0.71 -1.9 42,057 - B158DRAFT_1905 0.71 +0.1 42,089 + B158DRAFT_1905 0.75 -1.3 42,097 - B158DRAFT_1905 0.76 -0.0 42,097 - B158DRAFT_1905 0.76 -0.2 42,097 - B158DRAFT_1905 0.76 +1.6 42,097 - B158DRAFT_1905 0.76 -0.6 42,097 - B158DRAFT_1905 0.76 -0.1 42,109 + B158DRAFT_1905 0.77 -0.6 42,109 + B158DRAFT_1905 0.77 -1.0 42,109 + B158DRAFT_1905 0.77 +0.4 42,117 - B158DRAFT_1905 0.78 -0.5 42,135 + B158DRAFT_1905 0.80 -0.4 42,143 - B158DRAFT_1905 0.81 +0.3 42,153 - B158DRAFT_1905 0.82 -0.8 42,181 + B158DRAFT_1905 0.85 -0.4 42,189 - B158DRAFT_1905 0.86 -1.6 42,304 - +0.1 42,306 + +0.2 42,314 - +0.6 42,425 + B158DRAFT_1906 0.16 -0.2 42,425 + B158DRAFT_1906 0.16 +0.2 42,425 + B158DRAFT_1906 0.16 -0.7 42,425 + B158DRAFT_1906 0.16 -0.2 42,425 + B158DRAFT_1906 0.16 -0.0 42,425 + B158DRAFT_1906 0.16 -0.2 42,425 + B158DRAFT_1906 0.16 -0.2 42,425 + B158DRAFT_1906 0.16 -0.4 42,425 + B158DRAFT_1906 0.16 +0.1 42,425 + B158DRAFT_1906 0.16 +0.9 42,425 + B158DRAFT_1906 0.16 -0.2 42,425 + B158DRAFT_1906 0.16 -0.0 42,433 - B158DRAFT_1906 0.17 -0.2 42,433 - B158DRAFT_1906 0.17 -0.1 42,433 - B158DRAFT_1906 0.17 +0.3 42,433 - B158DRAFT_1906 0.17 +0.1 42,433 - B158DRAFT_1906 0.17 -0.9 42,433 - B158DRAFT_1906 0.17 -1.2 42,433 - B158DRAFT_1906 0.17 -0.9 42,433 - B158DRAFT_1906 0.17 +0.6 42,454 - B158DRAFT_1906 0.21 +0.5 42,470 + B158DRAFT_1906 0.24 -0.1 42,493 + B158DRAFT_1906 0.28 -0.0 42,549 + B158DRAFT_1906 0.38 +1.4 42,550 - B158DRAFT_1906 0.38 +0.1 42,557 - B158DRAFT_1906 0.39 -0.1 42,567 + B158DRAFT_1906 0.41 +0.1 42,588 + B158DRAFT_1906 0.45 +0.1 42,596 - B158DRAFT_1906 0.46 +0.8 42,608 - B158DRAFT_1906 0.49 +0.0 42,639 + B158DRAFT_1906 0.54 -0.2 42,642 - B158DRAFT_1906 0.55 +0.1 42,642 - B158DRAFT_1906 0.55 -0.6 42,730 - B158DRAFT_1906 0.70 -0.3 42,827 + B158DRAFT_1906 0.88 +0.1 42,835 + B158DRAFT_1906 0.89 +0.4 42,835 + B158DRAFT_1906 0.89 -0.2 42,835 + B158DRAFT_1906 0.89 +0.2 42,840 + -0.6 42,843 - +0.3 42,843 - +0.2 42,890 - -0.0 43,011 - +0.6 43,064 + -0.0 43,064 + -0.0 43,064 + -0.3 43,064 + -0.2 43,064 + +0.4 43,072 - +0.3 43,072 - +0.1 43,082 - B158DRAFT_1907 0.11 -0.4 43,113 - B158DRAFT_1907 0.16 -1.1 43,129 + B158DRAFT_1907 0.19 -0.8 43,160 - B158DRAFT_1907 0.24 +0.4 43,170 - B158DRAFT_1907 0.26 +0.6 43,236 - B158DRAFT_1907 0.37 +0.1 43,287 - B158DRAFT_1907 0.45 +0.2
Or see this region's nucleotide sequence