Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0615

Experiment: m.b. D-Cycloserine 0.03125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0614 and B158DRAFT_0615 are separated by 627 nucleotidesB158DRAFT_0615 and B158DRAFT_0616 are separated by 14 nucleotides B158DRAFT_0614: B158DRAFT_0614 - dihydrodipicolinate reductase (EC 1.3.1.26), at 621,358 to 622,161 _0614 B158DRAFT_0615: B158DRAFT_0615 - carbamoyl-phosphate synthase, small subunit, at 622,789 to 623,955 _0615 B158DRAFT_0616: B158DRAFT_0616 - carbamoyl-phosphate synthase, large subunit, at 623,970 to 627,194 _0616 Position (kb) 622 623 624Strain fitness (log2 ratio) -2 -1 0 1at 622.149 kb on - strandat 622.149 kb on - strandat 622.149 kb on - strandat 622.149 kb on - strandat 622.214 kb on - strandat 622.215 kb on - strandat 622.259 kb on - strandat 622.259 kb on - strandat 622.359 kb on - strandat 622.414 kb on - strandat 622.426 kb on + strandat 622.428 kb on - strandat 622.475 kb on + strandat 622.481 kb on - strandat 622.483 kb on - strandat 622.483 kb on - strandat 622.483 kb on - strandat 622.483 kb on - strandat 622.491 kb on - strandat 622.557 kb on + strandat 622.565 kb on - strandat 622.694 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.03125 mg/ml
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622,149 - -0.2
622,149 - -0.0
622,149 - -0.5
622,149 - -0.1
622,214 - -0.0
622,215 - +0.6
622,259 - -0.6
622,259 - -2.2
622,359 - -1.5
622,414 - -0.3
622,426 + -0.7
622,428 - -0.6
622,475 + -0.1
622,481 - -0.4
622,483 - +0.2
622,483 - -0.0
622,483 - +0.3
622,483 - -0.4
622,491 - +0.1
622,557 + +0.2
622,565 - -0.1
622,694 - -0.2

Or see this region's nucleotide sequence