Experiment: m.b. D-Cycloserine 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0610 and B158DRAFT_0611 overlap by 4 nucleotides B158DRAFT_0611 and B158DRAFT_0612 are separated by 295 nucleotides B158DRAFT_0612 and B158DRAFT_0613 overlap by 1 nucleotides B158DRAFT_0613 and B158DRAFT_0614 are separated by 30 nucleotides
B158DRAFT_0610: B158DRAFT_0610 - 5-(carboxyamino)imidazole ribonucleotide synthase, at 616,784 to 617,935
_0610
B158DRAFT_0611: B158DRAFT_0611 - 5-(carboxyamino)imidazole ribonucleotide mutase, at 617,932 to 618,417
_0611
B158DRAFT_0612: B158DRAFT_0612 - putative oligopeptide transporter, OPT family, at 618,713 to 620,707
_0612
B158DRAFT_0613: B158DRAFT_0613 - Lysophospholipase L1 and related esterases, at 620,707 to 621,327
_0613
B158DRAFT_0614: B158DRAFT_0614 - dihydrodipicolinate reductase (EC 1.3.1.26), at 621,358 to 622,161
_0614
Position (kb) 618
619
620
621 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 618.631 kb on - strand at 618.687 kb on + strand at 618.754 kb on - strand at 618.774 kb on + strand at 618.774 kb on + strand at 618.774 kb on + strand at 618.774 kb on + strand at 618.782 kb on - strand at 618.869 kb on + strand at 618.891 kb on + strand at 618.891 kb on + strand at 618.896 kb on + strand at 618.899 kb on - strand at 618.899 kb on - strand at 618.899 kb on - strand at 618.904 kb on - strand at 618.953 kb on + strand, within B158DRAFT_0612 at 619.033 kb on + strand, within B158DRAFT_0612 at 619.033 kb on + strand, within B158DRAFT_0612 at 619.041 kb on - strand, within B158DRAFT_0612 at 619.046 kb on + strand, within B158DRAFT_0612 at 619.054 kb on - strand, within B158DRAFT_0612 at 619.054 kb on - strand, within B158DRAFT_0612 at 619.064 kb on + strand, within B158DRAFT_0612 at 619.072 kb on - strand, within B158DRAFT_0612 at 619.088 kb on + strand, within B158DRAFT_0612 at 619.119 kb on + strand, within B158DRAFT_0612 at 619.141 kb on + strand, within B158DRAFT_0612 at 619.142 kb on - strand, within B158DRAFT_0612 at 619.156 kb on + strand, within B158DRAFT_0612 at 619.192 kb on + strand, within B158DRAFT_0612 at 619.192 kb on + strand, within B158DRAFT_0612 at 619.192 kb on + strand, within B158DRAFT_0612 at 619.192 kb on + strand, within B158DRAFT_0612 at 619.192 kb on + strand, within B158DRAFT_0612 at 619.200 kb on - strand, within B158DRAFT_0612 at 619.200 kb on - strand, within B158DRAFT_0612 at 619.200 kb on - strand, within B158DRAFT_0612 at 619.200 kb on - strand, within B158DRAFT_0612 at 619.204 kb on + strand, within B158DRAFT_0612 at 619.205 kb on - strand, within B158DRAFT_0612 at 619.223 kb on - strand, within B158DRAFT_0612 at 619.385 kb on - strand, within B158DRAFT_0612 at 619.408 kb on + strand, within B158DRAFT_0612 at 619.416 kb on - strand, within B158DRAFT_0612 at 619.438 kb on + strand, within B158DRAFT_0612 at 619.438 kb on + strand, within B158DRAFT_0612 at 619.438 kb on + strand, within B158DRAFT_0612 at 619.446 kb on - strand, within B158DRAFT_0612 at 619.454 kb on + strand, within B158DRAFT_0612 at 619.498 kb on + strand, within B158DRAFT_0612 at 619.505 kb on + strand, within B158DRAFT_0612 at 619.533 kb on + strand, within B158DRAFT_0612 at 619.533 kb on + strand, within B158DRAFT_0612 at 619.533 kb on + strand, within B158DRAFT_0612 at 619.541 kb on - strand, within B158DRAFT_0612 at 619.551 kb on - strand, within B158DRAFT_0612 at 619.562 kb on + strand, within B158DRAFT_0612 at 619.593 kb on - strand, within B158DRAFT_0612 at 619.641 kb on - strand, within B158DRAFT_0612 at 619.662 kb on + strand, within B158DRAFT_0612 at 619.662 kb on + strand, within B158DRAFT_0612 at 619.662 kb on + strand, within B158DRAFT_0612 at 619.662 kb on + strand, within B158DRAFT_0612 at 619.670 kb on - strand, within B158DRAFT_0612 at 619.684 kb on - strand, within B158DRAFT_0612 at 619.741 kb on + strand, within B158DRAFT_0612 at 619.751 kb on + strand, within B158DRAFT_0612 at 619.751 kb on + strand, within B158DRAFT_0612 at 619.751 kb on + strand, within B158DRAFT_0612 at 619.751 kb on + strand, within B158DRAFT_0612 at 619.756 kb on + strand, within B158DRAFT_0612 at 619.759 kb on - strand, within B158DRAFT_0612 at 619.813 kb on - strand, within B158DRAFT_0612 at 619.831 kb on - strand, within B158DRAFT_0612 at 619.836 kb on - strand, within B158DRAFT_0612 at 619.840 kb on + strand, within B158DRAFT_0612 at 619.913 kb on - strand, within B158DRAFT_0612 at 619.949 kb on - strand, within B158DRAFT_0612 at 619.963 kb on + strand, within B158DRAFT_0612 at 620.000 kb on - strand, within B158DRAFT_0612 at 620.008 kb on + strand, within B158DRAFT_0612 at 620.052 kb on + strand, within B158DRAFT_0612 at 620.063 kb on - strand, within B158DRAFT_0612 at 620.148 kb on + strand, within B158DRAFT_0612 at 620.155 kb on + strand, within B158DRAFT_0612 at 620.165 kb on + strand, within B158DRAFT_0612 at 620.165 kb on + strand, within B158DRAFT_0612 at 620.165 kb on + strand, within B158DRAFT_0612 at 620.165 kb on + strand, within B158DRAFT_0612 at 620.165 kb on + strand, within B158DRAFT_0612 at 620.165 kb on + strand, within B158DRAFT_0612 at 620.165 kb on + strand, within B158DRAFT_0612 at 620.173 kb on - strand, within B158DRAFT_0612 at 620.173 kb on - strand, within B158DRAFT_0612 at 620.173 kb on - strand, within B158DRAFT_0612 at 620.175 kb on + strand, within B158DRAFT_0612 at 620.266 kb on - strand, within B158DRAFT_0612 at 620.291 kb on + strand, within B158DRAFT_0612 at 620.296 kb on + strand, within B158DRAFT_0612 at 620.366 kb on + strand, within B158DRAFT_0612 at 620.404 kb on + strand, within B158DRAFT_0612 at 620.420 kb on - strand, within B158DRAFT_0612 at 620.425 kb on - strand, within B158DRAFT_0612 at 620.512 kb on - strand at 620.534 kb on + strand at 620.534 kb on + strand at 620.542 kb on - strand at 620.542 kb on - strand at 620.583 kb on - strand at 620.613 kb on + strand at 620.760 kb on + strand at 620.763 kb on + strand at 620.786 kb on + strand, within B158DRAFT_0613 at 620.809 kb on - strand, within B158DRAFT_0613 at 620.846 kb on + strand, within B158DRAFT_0613 at 620.854 kb on - strand, within B158DRAFT_0613 at 620.979 kb on + strand, within B158DRAFT_0613 at 620.979 kb on + strand, within B158DRAFT_0613 at 620.979 kb on + strand, within B158DRAFT_0613 at 620.979 kb on + strand, within B158DRAFT_0613 at 620.984 kb on + strand, within B158DRAFT_0613 at 620.984 kb on + strand, within B158DRAFT_0613 at 620.987 kb on - strand, within B158DRAFT_0613 at 620.992 kb on - strand, within B158DRAFT_0613 at 621.042 kb on + strand, within B158DRAFT_0613 at 621.053 kb on + strand, within B158DRAFT_0613 at 621.095 kb on + strand, within B158DRAFT_0613 at 621.095 kb on + strand, within B158DRAFT_0613 at 621.095 kb on + strand, within B158DRAFT_0613 at 621.095 kb on + strand, within B158DRAFT_0613 at 621.095 kb on + strand, within B158DRAFT_0613 at 621.095 kb on + strand, within B158DRAFT_0613 at 621.095 kb on + strand, within B158DRAFT_0613 at 621.095 kb on + strand, within B158DRAFT_0613 at 621.097 kb on + strand, within B158DRAFT_0613 at 621.216 kb on + strand, within B158DRAFT_0613 at 621.259 kb on + strand, within B158DRAFT_0613 at 621.259 kb on + strand, within B158DRAFT_0613 at 621.314 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.03125 mg/ml remove 618,631 - +0.1 618,687 + -0.6 618,754 - -0.8 618,774 + -0.3 618,774 + +1.0 618,774 + -0.3 618,774 + -0.3 618,782 - -1.9 618,869 + -0.1 618,891 + +0.0 618,891 + -0.4 618,896 + +0.1 618,899 - -1.1 618,899 - -2.2 618,899 - -0.3 618,904 - -1.6 618,953 + B158DRAFT_0612 0.12 -0.0 619,033 + B158DRAFT_0612 0.16 -0.4 619,033 + B158DRAFT_0612 0.16 -0.5 619,041 - B158DRAFT_0612 0.16 -1.6 619,046 + B158DRAFT_0612 0.17 +0.1 619,054 - B158DRAFT_0612 0.17 +0.1 619,054 - B158DRAFT_0612 0.17 -1.5 619,064 + B158DRAFT_0612 0.18 +0.0 619,072 - B158DRAFT_0612 0.18 -0.6 619,088 + B158DRAFT_0612 0.19 -0.5 619,119 + B158DRAFT_0612 0.20 +0.6 619,141 + B158DRAFT_0612 0.21 -0.1 619,142 - B158DRAFT_0612 0.22 -0.1 619,156 + B158DRAFT_0612 0.22 -0.3 619,192 + B158DRAFT_0612 0.24 -0.1 619,192 + B158DRAFT_0612 0.24 -0.2 619,192 + B158DRAFT_0612 0.24 +0.2 619,192 + B158DRAFT_0612 0.24 +0.2 619,192 + B158DRAFT_0612 0.24 -0.5 619,200 - B158DRAFT_0612 0.24 -1.6 619,200 - B158DRAFT_0612 0.24 -2.7 619,200 - B158DRAFT_0612 0.24 -1.2 619,200 - B158DRAFT_0612 0.24 -1.0 619,204 + B158DRAFT_0612 0.25 -0.9 619,205 - B158DRAFT_0612 0.25 -2.5 619,223 - B158DRAFT_0612 0.26 -1.8 619,385 - B158DRAFT_0612 0.34 -0.8 619,408 + B158DRAFT_0612 0.35 +0.0 619,416 - B158DRAFT_0612 0.35 -2.0 619,438 + B158DRAFT_0612 0.36 +0.5 619,438 + B158DRAFT_0612 0.36 -0.4 619,438 + B158DRAFT_0612 0.36 -0.1 619,446 - B158DRAFT_0612 0.37 -2.1 619,454 + B158DRAFT_0612 0.37 -0.4 619,498 + B158DRAFT_0612 0.39 +0.2 619,505 + B158DRAFT_0612 0.40 +0.6 619,533 + B158DRAFT_0612 0.41 +1.0 619,533 + B158DRAFT_0612 0.41 +0.0 619,533 + B158DRAFT_0612 0.41 -4.6 619,541 - B158DRAFT_0612 0.42 -0.2 619,551 - B158DRAFT_0612 0.42 -1.6 619,562 + B158DRAFT_0612 0.43 +0.0 619,593 - B158DRAFT_0612 0.44 -1.7 619,641 - B158DRAFT_0612 0.47 -2.4 619,662 + B158DRAFT_0612 0.48 -0.2 619,662 + B158DRAFT_0612 0.48 +0.0 619,662 + B158DRAFT_0612 0.48 -0.6 619,662 + B158DRAFT_0612 0.48 -1.2 619,670 - B158DRAFT_0612 0.48 -0.6 619,684 - B158DRAFT_0612 0.49 -2.0 619,741 + B158DRAFT_0612 0.52 -0.2 619,751 + B158DRAFT_0612 0.52 +1.0 619,751 + B158DRAFT_0612 0.52 -0.7 619,751 + B158DRAFT_0612 0.52 -1.2 619,751 + B158DRAFT_0612 0.52 +0.2 619,756 + B158DRAFT_0612 0.52 -0.0 619,759 - B158DRAFT_0612 0.52 -1.7 619,813 - B158DRAFT_0612 0.55 -1.6 619,831 - B158DRAFT_0612 0.56 -2.0 619,836 - B158DRAFT_0612 0.56 -1.7 619,840 + B158DRAFT_0612 0.56 +0.8 619,913 - B158DRAFT_0612 0.60 -1.3 619,949 - B158DRAFT_0612 0.62 +0.0 619,963 + B158DRAFT_0612 0.63 +0.4 620,000 - B158DRAFT_0612 0.65 -1.8 620,008 + B158DRAFT_0612 0.65 -0.3 620,052 + B158DRAFT_0612 0.67 -0.7 620,063 - B158DRAFT_0612 0.68 -0.9 620,148 + B158DRAFT_0612 0.72 -1.3 620,155 + B158DRAFT_0612 0.72 +0.4 620,165 + B158DRAFT_0612 0.73 -0.9 620,165 + B158DRAFT_0612 0.73 +0.1 620,165 + B158DRAFT_0612 0.73 -1.5 620,165 + B158DRAFT_0612 0.73 -0.5 620,165 + B158DRAFT_0612 0.73 +0.5 620,165 + B158DRAFT_0612 0.73 -0.3 620,165 + B158DRAFT_0612 0.73 -0.2 620,173 - B158DRAFT_0612 0.73 -0.9 620,173 - B158DRAFT_0612 0.73 -1.3 620,173 - B158DRAFT_0612 0.73 -1.2 620,175 + B158DRAFT_0612 0.73 -0.3 620,266 - B158DRAFT_0612 0.78 -1.3 620,291 + B158DRAFT_0612 0.79 +0.4 620,296 + B158DRAFT_0612 0.79 +0.4 620,366 + B158DRAFT_0612 0.83 -0.4 620,404 + B158DRAFT_0612 0.85 -0.2 620,420 - B158DRAFT_0612 0.86 -2.2 620,425 - B158DRAFT_0612 0.86 -3.8 620,512 - -1.4 620,534 + +0.1 620,534 + -0.2 620,542 - -1.4 620,542 - -1.8 620,583 - -2.2 620,613 + -0.6 620,760 + +0.2 620,763 + -0.3 620,786 + B158DRAFT_0613 0.13 +0.3 620,809 - B158DRAFT_0613 0.16 -0.2 620,846 + B158DRAFT_0613 0.22 +0.2 620,854 - B158DRAFT_0613 0.24 -0.8 620,979 + B158DRAFT_0613 0.44 -0.0 620,979 + B158DRAFT_0613 0.44 -0.0 620,979 + B158DRAFT_0613 0.44 -0.3 620,979 + B158DRAFT_0613 0.44 -0.1 620,984 + B158DRAFT_0613 0.45 +0.2 620,984 + B158DRAFT_0613 0.45 +0.1 620,987 - B158DRAFT_0613 0.45 -0.8 620,992 - B158DRAFT_0613 0.46 -0.6 621,042 + B158DRAFT_0613 0.54 -0.9 621,053 + B158DRAFT_0613 0.56 -0.0 621,095 + B158DRAFT_0613 0.62 +0.4 621,095 + B158DRAFT_0613 0.62 -0.1 621,095 + B158DRAFT_0613 0.62 -0.1 621,095 + B158DRAFT_0613 0.62 +0.2 621,095 + B158DRAFT_0613 0.62 -1.7 621,095 + B158DRAFT_0613 0.62 +0.0 621,095 + B158DRAFT_0613 0.62 -0.6 621,095 + B158DRAFT_0613 0.62 +1.6 621,097 + B158DRAFT_0613 0.63 -0.8 621,216 + B158DRAFT_0613 0.82 -1.2 621,259 + B158DRAFT_0613 0.89 -0.7 621,259 + B158DRAFT_0613 0.89 +0.1 621,314 + -0.8
Or see this region's nucleotide sequence