Experiment: m.b. D-Cycloserine 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0579 and B158DRAFT_0580 overlap by 4 nucleotides B158DRAFT_0580 and B158DRAFT_0581 are separated by 117 nucleotides
B158DRAFT_0579: B158DRAFT_0579 - Uncharacterized protein conserved in bacteria, at 583,404 to 585,875
_0579
B158DRAFT_0580: B158DRAFT_0580 - NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit, at 585,872 to 587,410
_0580
B158DRAFT_0581: B158DRAFT_0581 - transcriptional regulator, LysR family, at 587,528 to 588,403
_0581
Position (kb) 585
586
587
588 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 584.884 kb on - strand, within B158DRAFT_0579 at 584.918 kb on + strand, within B158DRAFT_0579 at 584.918 kb on + strand, within B158DRAFT_0579 at 584.918 kb on + strand, within B158DRAFT_0579 at 584.918 kb on + strand, within B158DRAFT_0579 at 584.918 kb on + strand, within B158DRAFT_0579 at 584.918 kb on + strand, within B158DRAFT_0579 at 584.926 kb on - strand, within B158DRAFT_0579 at 584.926 kb on - strand, within B158DRAFT_0579 at 584.926 kb on - strand, within B158DRAFT_0579 at 584.926 kb on - strand, within B158DRAFT_0579 at 584.926 kb on - strand, within B158DRAFT_0579 at 584.926 kb on - strand, within B158DRAFT_0579 at 584.926 kb on - strand, within B158DRAFT_0579 at 584.926 kb on - strand, within B158DRAFT_0579 at 584.926 kb on - strand, within B158DRAFT_0579 at 584.926 kb on - strand, within B158DRAFT_0579 at 584.950 kb on - strand, within B158DRAFT_0579 at 584.952 kb on + strand, within B158DRAFT_0579 at 585.006 kb on - strand, within B158DRAFT_0579 at 585.006 kb on - strand, within B158DRAFT_0579 at 585.008 kb on - strand, within B158DRAFT_0579 at 585.063 kb on + strand, within B158DRAFT_0579 at 585.096 kb on - strand, within B158DRAFT_0579 at 585.096 kb on - strand, within B158DRAFT_0579 at 585.198 kb on + strand, within B158DRAFT_0579 at 585.198 kb on + strand, within B158DRAFT_0579 at 585.198 kb on + strand, within B158DRAFT_0579 at 585.201 kb on + strand, within B158DRAFT_0579 at 585.206 kb on - strand, within B158DRAFT_0579 at 585.206 kb on - strand, within B158DRAFT_0579 at 585.206 kb on - strand, within B158DRAFT_0579 at 585.208 kb on - strand, within B158DRAFT_0579 at 585.241 kb on + strand, within B158DRAFT_0579 at 585.304 kb on + strand, within B158DRAFT_0579 at 585.312 kb on - strand, within B158DRAFT_0579 at 585.316 kb on + strand, within B158DRAFT_0579 at 585.326 kb on + strand, within B158DRAFT_0579 at 585.335 kb on + strand, within B158DRAFT_0579 at 585.359 kb on + strand, within B158DRAFT_0579 at 585.359 kb on + strand, within B158DRAFT_0579 at 585.367 kb on - strand, within B158DRAFT_0579 at 585.367 kb on - strand, within B158DRAFT_0579 at 585.367 kb on - strand, within B158DRAFT_0579 at 585.367 kb on - strand, within B158DRAFT_0579 at 585.369 kb on - strand, within B158DRAFT_0579 at 585.412 kb on + strand, within B158DRAFT_0579 at 585.420 kb on - strand, within B158DRAFT_0579 at 585.434 kb on - strand, within B158DRAFT_0579 at 585.436 kb on + strand, within B158DRAFT_0579 at 585.436 kb on + strand, within B158DRAFT_0579 at 585.436 kb on + strand, within B158DRAFT_0579 at 585.436 kb on + strand, within B158DRAFT_0579 at 585.444 kb on - strand, within B158DRAFT_0579 at 585.444 kb on - strand, within B158DRAFT_0579 at 585.452 kb on + strand, within B158DRAFT_0579 at 585.481 kb on + strand, within B158DRAFT_0579 at 585.481 kb on + strand, within B158DRAFT_0579 at 585.481 kb on + strand, within B158DRAFT_0579 at 585.489 kb on - strand, within B158DRAFT_0579 at 585.489 kb on - strand, within B158DRAFT_0579 at 585.507 kb on + strand, within B158DRAFT_0579 at 585.530 kb on + strand, within B158DRAFT_0579 at 585.530 kb on + strand, within B158DRAFT_0579 at 585.530 kb on + strand, within B158DRAFT_0579 at 585.538 kb on - strand, within B158DRAFT_0579 at 585.538 kb on - strand, within B158DRAFT_0579 at 585.540 kb on + strand, within B158DRAFT_0579 at 585.573 kb on - strand, within B158DRAFT_0579 at 585.578 kb on + strand, within B158DRAFT_0579 at 585.611 kb on - strand, within B158DRAFT_0579 at 585.644 kb on + strand at 585.644 kb on + strand at 585.652 kb on - strand at 585.652 kb on - strand at 585.652 kb on - strand at 585.784 kb on + strand at 585.789 kb on + strand at 585.883 kb on + strand at 585.883 kb on + strand at 585.883 kb on + strand at 585.891 kb on - strand at 585.891 kb on - strand at 585.891 kb on - strand at 585.976 kb on - strand at 586.051 kb on + strand, within B158DRAFT_0580 at 586.065 kb on + strand, within B158DRAFT_0580 at 586.065 kb on + strand, within B158DRAFT_0580 at 586.090 kb on - strand, within B158DRAFT_0580 at 586.139 kb on - strand, within B158DRAFT_0580 at 586.172 kb on - strand, within B158DRAFT_0580 at 586.181 kb on + strand, within B158DRAFT_0580 at 586.197 kb on - strand, within B158DRAFT_0580 at 586.241 kb on + strand, within B158DRAFT_0580 at 586.249 kb on - strand, within B158DRAFT_0580 at 586.249 kb on - strand, within B158DRAFT_0580 at 586.301 kb on + strand, within B158DRAFT_0580 at 586.309 kb on - strand, within B158DRAFT_0580 at 586.309 kb on - strand, within B158DRAFT_0580 at 586.311 kb on - strand, within B158DRAFT_0580 at 586.337 kb on + strand, within B158DRAFT_0580 at 586.337 kb on + strand, within B158DRAFT_0580 at 586.345 kb on - strand, within B158DRAFT_0580 at 586.345 kb on - strand, within B158DRAFT_0580 at 586.345 kb on - strand, within B158DRAFT_0580 at 586.386 kb on + strand, within B158DRAFT_0580 at 586.394 kb on - strand, within B158DRAFT_0580 at 586.394 kb on - strand, within B158DRAFT_0580 at 586.395 kb on + strand, within B158DRAFT_0580 at 586.403 kb on - strand, within B158DRAFT_0580 at 586.417 kb on - strand, within B158DRAFT_0580 at 586.448 kb on + strand, within B158DRAFT_0580 at 586.456 kb on - strand, within B158DRAFT_0580 at 586.456 kb on - strand, within B158DRAFT_0580 at 586.456 kb on - strand, within B158DRAFT_0580 at 586.512 kb on - strand, within B158DRAFT_0580 at 586.532 kb on + strand, within B158DRAFT_0580 at 586.532 kb on + strand, within B158DRAFT_0580 at 586.537 kb on + strand, within B158DRAFT_0580 at 586.540 kb on + strand, within B158DRAFT_0580 at 586.620 kb on + strand, within B158DRAFT_0580 at 586.620 kb on - strand, within B158DRAFT_0580 at 586.640 kb on - strand, within B158DRAFT_0580 at 586.650 kb on + strand, within B158DRAFT_0580 at 586.653 kb on - strand, within B158DRAFT_0580 at 586.658 kb on - strand, within B158DRAFT_0580 at 586.658 kb on - strand, within B158DRAFT_0580 at 586.682 kb on + strand, within B158DRAFT_0580 at 586.682 kb on + strand, within B158DRAFT_0580 at 586.721 kb on + strand, within B158DRAFT_0580 at 586.791 kb on + strand, within B158DRAFT_0580 at 586.791 kb on + strand, within B158DRAFT_0580 at 586.791 kb on + strand, within B158DRAFT_0580 at 586.791 kb on + strand, within B158DRAFT_0580 at 586.791 kb on + strand, within B158DRAFT_0580 at 586.791 kb on + strand, within B158DRAFT_0580 at 586.791 kb on + strand, within B158DRAFT_0580 at 586.799 kb on - strand, within B158DRAFT_0580 at 586.799 kb on - strand, within B158DRAFT_0580 at 586.799 kb on - strand, within B158DRAFT_0580 at 586.799 kb on - strand, within B158DRAFT_0580 at 586.799 kb on - strand, within B158DRAFT_0580 at 586.818 kb on - strand, within B158DRAFT_0580 at 586.886 kb on + strand, within B158DRAFT_0580 at 586.911 kb on - strand, within B158DRAFT_0580 at 586.977 kb on + strand, within B158DRAFT_0580 at 586.977 kb on + strand, within B158DRAFT_0580 at 587.044 kb on - strand, within B158DRAFT_0580 at 587.046 kb on + strand, within B158DRAFT_0580 at 587.084 kb on + strand, within B158DRAFT_0580 at 587.084 kb on + strand, within B158DRAFT_0580 at 587.092 kb on - strand, within B158DRAFT_0580 at 587.197 kb on - strand, within B158DRAFT_0580 at 587.247 kb on + strand, within B158DRAFT_0580 at 587.247 kb on + strand, within B158DRAFT_0580 at 587.247 kb on + strand, within B158DRAFT_0580 at 587.247 kb on + strand, within B158DRAFT_0580 at 587.255 kb on - strand, within B158DRAFT_0580 at 587.255 kb on - strand, within B158DRAFT_0580 at 587.255 kb on - strand, within B158DRAFT_0580 at 587.255 kb on - strand, within B158DRAFT_0580 at 587.255 kb on - strand, within B158DRAFT_0580 at 587.270 kb on - strand at 587.272 kb on + strand at 587.272 kb on + strand at 587.277 kb on + strand at 587.282 kb on + strand at 587.282 kb on + strand at 587.299 kb on - strand at 587.376 kb on + strand at 587.437 kb on + strand at 587.437 kb on + strand at 587.560 kb on + strand at 587.579 kb on - strand at 587.585 kb on + strand at 587.585 kb on + strand at 587.697 kb on + strand, within B158DRAFT_0581 at 587.765 kb on + strand, within B158DRAFT_0581 at 587.810 kb on - strand, within B158DRAFT_0581 at 587.828 kb on + strand, within B158DRAFT_0581 at 587.836 kb on - strand, within B158DRAFT_0581 at 587.934 kb on - strand, within B158DRAFT_0581 at 588.000 kb on + strand, within B158DRAFT_0581 at 588.000 kb on + strand, within B158DRAFT_0581 at 588.002 kb on - strand, within B158DRAFT_0581 at 588.008 kb on - strand, within B158DRAFT_0581 at 588.008 kb on - strand, within B158DRAFT_0581 at 588.008 kb on - strand, within B158DRAFT_0581 at 588.047 kb on - strand, within B158DRAFT_0581 at 588.149 kb on + strand, within B158DRAFT_0581 at 588.184 kb on + strand, within B158DRAFT_0581 at 588.189 kb on + strand, within B158DRAFT_0581 at 588.189 kb on + strand, within B158DRAFT_0581 at 588.197 kb on - strand, within B158DRAFT_0581 at 588.197 kb on - strand, within B158DRAFT_0581 at 588.197 kb on - strand, within B158DRAFT_0581 at 588.197 kb on - strand, within B158DRAFT_0581 at 588.227 kb on - strand, within B158DRAFT_0581 at 588.232 kb on + strand, within B158DRAFT_0581 at 588.240 kb on - strand, within B158DRAFT_0581 at 588.243 kb on + strand, within B158DRAFT_0581 at 588.243 kb on + strand, within B158DRAFT_0581 at 588.243 kb on + strand, within B158DRAFT_0581 at 588.243 kb on + strand, within B158DRAFT_0581 at 588.282 kb on - strand, within B158DRAFT_0581 at 588.321 kb on - strand at 588.321 kb on - strand at 588.323 kb on + strand at 588.405 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.03125 mg/ml remove 584,884 - B158DRAFT_0579 0.60 +0.2 584,918 + B158DRAFT_0579 0.61 +0.2 584,918 + B158DRAFT_0579 0.61 -1.3 584,918 + B158DRAFT_0579 0.61 -1.5 584,918 + B158DRAFT_0579 0.61 -1.6 584,918 + B158DRAFT_0579 0.61 -1.0 584,918 + B158DRAFT_0579 0.61 -0.7 584,926 - B158DRAFT_0579 0.62 -1.1 584,926 - B158DRAFT_0579 0.62 -0.7 584,926 - B158DRAFT_0579 0.62 -0.8 584,926 - B158DRAFT_0579 0.62 -2.1 584,926 - B158DRAFT_0579 0.62 -1.2 584,926 - B158DRAFT_0579 0.62 -2.2 584,926 - B158DRAFT_0579 0.62 -1.5 584,926 - B158DRAFT_0579 0.62 -3.4 584,926 - B158DRAFT_0579 0.62 -1.2 584,926 - B158DRAFT_0579 0.62 -1.8 584,950 - B158DRAFT_0579 0.63 -3.3 584,952 + B158DRAFT_0579 0.63 -0.7 585,006 - B158DRAFT_0579 0.65 -1.4 585,006 - B158DRAFT_0579 0.65 -2.0 585,008 - B158DRAFT_0579 0.65 -1.7 585,063 + B158DRAFT_0579 0.67 -1.6 585,096 - B158DRAFT_0579 0.68 -0.9 585,096 - B158DRAFT_0579 0.68 -0.2 585,198 + B158DRAFT_0579 0.73 -2.1 585,198 + B158DRAFT_0579 0.73 +0.3 585,198 + B158DRAFT_0579 0.73 -2.3 585,201 + B158DRAFT_0579 0.73 -1.2 585,206 - B158DRAFT_0579 0.73 -1.2 585,206 - B158DRAFT_0579 0.73 +0.4 585,206 - B158DRAFT_0579 0.73 -1.8 585,208 - B158DRAFT_0579 0.73 -1.7 585,241 + B158DRAFT_0579 0.74 -1.5 585,304 + B158DRAFT_0579 0.77 -0.9 585,312 - B158DRAFT_0579 0.77 -1.4 585,316 + B158DRAFT_0579 0.77 -0.8 585,326 + B158DRAFT_0579 0.78 -0.6 585,335 + B158DRAFT_0579 0.78 -1.7 585,359 + B158DRAFT_0579 0.79 -0.2 585,359 + B158DRAFT_0579 0.79 -1.4 585,367 - B158DRAFT_0579 0.79 -0.4 585,367 - B158DRAFT_0579 0.79 +0.6 585,367 - B158DRAFT_0579 0.79 -2.1 585,367 - B158DRAFT_0579 0.79 -1.1 585,369 - B158DRAFT_0579 0.79 -1.6 585,412 + B158DRAFT_0579 0.81 -1.1 585,420 - B158DRAFT_0579 0.82 -0.4 585,434 - B158DRAFT_0579 0.82 -3.1 585,436 + B158DRAFT_0579 0.82 -0.7 585,436 + B158DRAFT_0579 0.82 -1.3 585,436 + B158DRAFT_0579 0.82 -1.2 585,436 + B158DRAFT_0579 0.82 -1.6 585,444 - B158DRAFT_0579 0.83 -2.1 585,444 - B158DRAFT_0579 0.83 -1.6 585,452 + B158DRAFT_0579 0.83 -1.2 585,481 + B158DRAFT_0579 0.84 -1.3 585,481 + B158DRAFT_0579 0.84 -1.0 585,481 + B158DRAFT_0579 0.84 -1.1 585,489 - B158DRAFT_0579 0.84 -2.1 585,489 - B158DRAFT_0579 0.84 +0.8 585,507 + B158DRAFT_0579 0.85 -0.3 585,530 + B158DRAFT_0579 0.86 -2.1 585,530 + B158DRAFT_0579 0.86 -2.3 585,530 + B158DRAFT_0579 0.86 -1.2 585,538 - B158DRAFT_0579 0.86 -1.1 585,538 - B158DRAFT_0579 0.86 -0.2 585,540 + B158DRAFT_0579 0.86 -2.2 585,573 - B158DRAFT_0579 0.88 -1.4 585,578 + B158DRAFT_0579 0.88 -1.2 585,611 - B158DRAFT_0579 0.89 -0.8 585,644 + -0.6 585,644 + -1.3 585,652 - -0.2 585,652 - +0.2 585,652 - -0.2 585,784 + -0.6 585,789 + -2.0 585,883 + -1.6 585,883 + -1.0 585,883 + -1.2 585,891 - +0.4 585,891 - +0.5 585,891 - +0.3 585,976 - -1.2 586,051 + B158DRAFT_0580 0.12 -1.2 586,065 + B158DRAFT_0580 0.13 -1.1 586,065 + B158DRAFT_0580 0.13 -1.5 586,090 - B158DRAFT_0580 0.14 -1.5 586,139 - B158DRAFT_0580 0.17 -1.7 586,172 - B158DRAFT_0580 0.19 -2.6 586,181 + B158DRAFT_0580 0.20 -2.7 586,197 - B158DRAFT_0580 0.21 -2.8 586,241 + B158DRAFT_0580 0.24 -0.8 586,249 - B158DRAFT_0580 0.24 -1.6 586,249 - B158DRAFT_0580 0.24 -1.2 586,301 + B158DRAFT_0580 0.28 +1.8 586,309 - B158DRAFT_0580 0.28 -0.8 586,309 - B158DRAFT_0580 0.28 -0.7 586,311 - B158DRAFT_0580 0.29 -0.0 586,337 + B158DRAFT_0580 0.30 -0.8 586,337 + B158DRAFT_0580 0.30 -0.8 586,345 - B158DRAFT_0580 0.31 -0.4 586,345 - B158DRAFT_0580 0.31 -1.5 586,345 - B158DRAFT_0580 0.31 -1.6 586,386 + B158DRAFT_0580 0.33 -0.7 586,394 - B158DRAFT_0580 0.34 -0.4 586,394 - B158DRAFT_0580 0.34 -4.0 586,395 + B158DRAFT_0580 0.34 -1.6 586,403 - B158DRAFT_0580 0.35 -1.3 586,417 - B158DRAFT_0580 0.35 -1.8 586,448 + B158DRAFT_0580 0.37 -1.0 586,456 - B158DRAFT_0580 0.38 -0.5 586,456 - B158DRAFT_0580 0.38 -0.5 586,456 - B158DRAFT_0580 0.38 -1.1 586,512 - B158DRAFT_0580 0.42 -1.9 586,532 + B158DRAFT_0580 0.43 -1.2 586,532 + B158DRAFT_0580 0.43 -1.1 586,537 + B158DRAFT_0580 0.43 -0.8 586,540 + B158DRAFT_0580 0.43 -2.8 586,620 + B158DRAFT_0580 0.49 -1.8 586,620 - B158DRAFT_0580 0.49 -2.3 586,640 - B158DRAFT_0580 0.50 -0.5 586,650 + B158DRAFT_0580 0.51 -1.2 586,653 - B158DRAFT_0580 0.51 -0.8 586,658 - B158DRAFT_0580 0.51 +0.8 586,658 - B158DRAFT_0580 0.51 -1.0 586,682 + B158DRAFT_0580 0.53 -1.6 586,682 + B158DRAFT_0580 0.53 -1.7 586,721 + B158DRAFT_0580 0.55 -0.4 586,791 + B158DRAFT_0580 0.60 -2.2 586,791 + B158DRAFT_0580 0.60 -2.1 586,791 + B158DRAFT_0580 0.60 +0.2 586,791 + B158DRAFT_0580 0.60 -0.6 586,791 + B158DRAFT_0580 0.60 -0.8 586,791 + B158DRAFT_0580 0.60 -2.5 586,791 + B158DRAFT_0580 0.60 +1.5 586,799 - B158DRAFT_0580 0.60 -0.5 586,799 - B158DRAFT_0580 0.60 -2.8 586,799 - B158DRAFT_0580 0.60 -1.0 586,799 - B158DRAFT_0580 0.60 -1.2 586,799 - B158DRAFT_0580 0.60 -1.1 586,818 - B158DRAFT_0580 0.61 -1.1 586,886 + B158DRAFT_0580 0.66 -1.7 586,911 - B158DRAFT_0580 0.68 -0.6 586,977 + B158DRAFT_0580 0.72 -0.6 586,977 + B158DRAFT_0580 0.72 -1.3 587,044 - B158DRAFT_0580 0.76 -0.3 587,046 + B158DRAFT_0580 0.76 -1.0 587,084 + B158DRAFT_0580 0.79 -1.0 587,084 + B158DRAFT_0580 0.79 -1.5 587,092 - B158DRAFT_0580 0.79 +0.2 587,197 - B158DRAFT_0580 0.86 -0.8 587,247 + B158DRAFT_0580 0.89 -2.1 587,247 + B158DRAFT_0580 0.89 -2.1 587,247 + B158DRAFT_0580 0.89 -0.9 587,247 + B158DRAFT_0580 0.89 -3.1 587,255 - B158DRAFT_0580 0.90 -1.1 587,255 - B158DRAFT_0580 0.90 -1.8 587,255 - B158DRAFT_0580 0.90 +0.1 587,255 - B158DRAFT_0580 0.90 -1.6 587,255 - B158DRAFT_0580 0.90 -1.2 587,270 - -1.9 587,272 + -1.8 587,272 + -1.2 587,277 + -1.4 587,282 + -1.5 587,282 + -1.7 587,299 - -0.9 587,376 + -1.0 587,437 + -1.8 587,437 + -1.8 587,560 + +0.3 587,579 - -0.2 587,585 + -0.0 587,585 + +0.2 587,697 + B158DRAFT_0581 0.19 -0.2 587,765 + B158DRAFT_0581 0.27 +0.4 587,810 - B158DRAFT_0581 0.32 -1.6 587,828 + B158DRAFT_0581 0.34 +0.4 587,836 - B158DRAFT_0581 0.35 +0.1 587,934 - B158DRAFT_0581 0.46 -0.4 588,000 + B158DRAFT_0581 0.54 +0.5 588,000 + B158DRAFT_0581 0.54 +0.8 588,002 - B158DRAFT_0581 0.54 +0.1 588,008 - B158DRAFT_0581 0.55 +0.3 588,008 - B158DRAFT_0581 0.55 -0.1 588,008 - B158DRAFT_0581 0.55 -1.1 588,047 - B158DRAFT_0581 0.59 +0.4 588,149 + B158DRAFT_0581 0.71 +0.4 588,184 + B158DRAFT_0581 0.75 +0.2 588,189 + B158DRAFT_0581 0.75 -0.4 588,189 + B158DRAFT_0581 0.75 -0.5 588,197 - B158DRAFT_0581 0.76 -1.2 588,197 - B158DRAFT_0581 0.76 +0.2 588,197 - B158DRAFT_0581 0.76 +0.2 588,197 - B158DRAFT_0581 0.76 -0.3 588,227 - B158DRAFT_0581 0.80 -0.3 588,232 + B158DRAFT_0581 0.80 -0.1 588,240 - B158DRAFT_0581 0.81 +0.0 588,243 + B158DRAFT_0581 0.82 +0.1 588,243 + B158DRAFT_0581 0.82 +0.1 588,243 + B158DRAFT_0581 0.82 -0.0 588,243 + B158DRAFT_0581 0.82 -0.6 588,282 - B158DRAFT_0581 0.86 +0.2 588,321 - +0.1 588,321 - -1.1 588,323 + +0.0 588,405 + +0.3
Or see this region's nucleotide sequence