Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0293

Experiment: m.b. D-Cycloserine 0.03125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0291 and B158DRAFT_0293 are separated by 618 nucleotidesB158DRAFT_0293 and B158DRAFT_0294 overlap by 17 nucleotides B158DRAFT_0291: B158DRAFT_0291 - thiazole-phosphate synthase, at 294,900 to 295,673 _0291 B158DRAFT_0293: B158DRAFT_0293 - thiamine biosynthesis protein ThiS, at 296,292 to 296,489 _0293 B158DRAFT_0294: B158DRAFT_0294 - glycine oxidase (EC 1.4.3.19), at 296,473 to 297,528 _0294 Position (kb) 296 297Strain fitness (log2 ratio) -2 -1 0 1at 295.312 kb on - strand, within B158DRAFT_0291at 295.394 kb on + strand, within B158DRAFT_0291at 295.402 kb on - strand, within B158DRAFT_0291at 295.474 kb on + strand, within B158DRAFT_0291at 295.530 kb on + strand, within B158DRAFT_0291at 295.538 kb on - strand, within B158DRAFT_0291at 295.538 kb on - strand, within B158DRAFT_0291at 295.539 kb on - strand, within B158DRAFT_0291at 295.564 kb on + strand, within B158DRAFT_0291at 295.939 kb on - strandat 295.939 kb on - strandat 295.954 kb on + strandat 295.968 kb on + strandat 295.968 kb on + strandat 295.976 kb on - strandat 295.984 kb on - strandat 296.440 kb on - strand, within B158DRAFT_0293at 296.440 kb on - strand, within B158DRAFT_0293at 296.440 kb on - strand, within B158DRAFT_0293at 296.629 kb on + strand, within B158DRAFT_0294at 296.699 kb on + strand, within B158DRAFT_0294at 296.701 kb on + strand, within B158DRAFT_0294at 296.845 kb on + strand, within B158DRAFT_0294at 296.845 kb on + strand, within B158DRAFT_0294at 296.860 kb on + strand, within B158DRAFT_0294at 296.979 kb on - strand, within B158DRAFT_0294at 297.005 kb on - strand, within B158DRAFT_0294at 297.065 kb on + strand, within B158DRAFT_0294at 297.065 kb on + strand, within B158DRAFT_0294at 297.073 kb on - strand, within B158DRAFT_0294at 297.083 kb on - strand, within B158DRAFT_0294at 297.083 kb on - strand, within B158DRAFT_0294at 297.185 kb on + strand, within B158DRAFT_0294at 297.241 kb on + strand, within B158DRAFT_0294at 297.242 kb on - strand, within B158DRAFT_0294at 297.243 kb on - strand, within B158DRAFT_0294at 297.393 kb on - strand, within B158DRAFT_0294

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.03125 mg/ml
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295,312 - B158DRAFT_0291 0.53 -0.9
295,394 + B158DRAFT_0291 0.64 -1.1
295,402 - B158DRAFT_0291 0.65 -1.1
295,474 + B158DRAFT_0291 0.74 -1.2
295,530 + B158DRAFT_0291 0.81 -1.0
295,538 - B158DRAFT_0291 0.82 -1.7
295,538 - B158DRAFT_0291 0.82 -1.2
295,539 - B158DRAFT_0291 0.83 -0.6
295,564 + B158DRAFT_0291 0.86 -1.3
295,939 - -0.0
295,939 - -0.2
295,954 + -1.5
295,968 + -0.3
295,968 + -2.1
295,976 - -0.5
295,984 - +0.2
296,440 - B158DRAFT_0293 0.75 -1.4
296,440 - B158DRAFT_0293 0.75 -1.8
296,440 - B158DRAFT_0293 0.75 -0.3
296,629 + B158DRAFT_0294 0.15 -0.8
296,699 + B158DRAFT_0294 0.21 -1.5
296,701 + B158DRAFT_0294 0.22 -1.3
296,845 + B158DRAFT_0294 0.35 -1.8
296,845 + B158DRAFT_0294 0.35 -0.9
296,860 + B158DRAFT_0294 0.37 -0.8
296,979 - B158DRAFT_0294 0.48 -2.0
297,005 - B158DRAFT_0294 0.50 -1.9
297,065 + B158DRAFT_0294 0.56 -1.0
297,065 + B158DRAFT_0294 0.56 -1.7
297,073 - B158DRAFT_0294 0.57 -0.7
297,083 - B158DRAFT_0294 0.58 -1.1
297,083 - B158DRAFT_0294 0.58 +0.1
297,185 + B158DRAFT_0294 0.67 +0.6
297,241 + B158DRAFT_0294 0.73 -2.3
297,242 - B158DRAFT_0294 0.73 -1.2
297,243 - B158DRAFT_0294 0.73 -1.2
297,393 - B158DRAFT_0294 0.87 -1.4

Or see this region's nucleotide sequence