Experiment: m.b. A22 0.021875 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1717 and B158DRAFT_1718 overlap by 1 nucleotides B158DRAFT_1718 and B158DRAFT_1719 are separated by 275 nucleotides B158DRAFT_1719 and B158DRAFT_1720 are separated by 11 nucleotides B158DRAFT_1720 and B158DRAFT_1721 are separated by 3 nucleotides
B158DRAFT_1717: B158DRAFT_1717 - hypothetical protein, at 1,792,031 to 1,793,044
_1717
B158DRAFT_1718: B158DRAFT_1718 - hypothetical protein, at 1,793,044 to 1,793,532
_1718
B158DRAFT_1719: B158DRAFT_1719 - 4-hydroxyphenylpyruvate dioxygenase, at 1,793,808 to 1,794,890
_1719
B158DRAFT_1720: B158DRAFT_1720 - Lactoylglutathione lyase and related lyases, at 1,794,902 to 1,795,441
_1720
B158DRAFT_1721: B158DRAFT_1721 - Phenylalanine 4-hydroxylase (EC 1.14.16.1), at 1,795,445 to 1,796,266
_1721
Position (kb)
1793
1794
1795 Strain fitness (log2 ratio)
-2
-1
0
1 at 1792.836 kb on + strand, within B158DRAFT_1717 at 1793.101 kb on - strand, within B158DRAFT_1718 at 1793.183 kb on + strand, within B158DRAFT_1718 at 1793.191 kb on - strand, within B158DRAFT_1718 at 1793.191 kb on - strand, within B158DRAFT_1718 at 1793.236 kb on + strand, within B158DRAFT_1718 at 1793.244 kb on - strand, within B158DRAFT_1718 at 1793.244 kb on - strand, within B158DRAFT_1718 at 1793.268 kb on + strand, within B158DRAFT_1718 at 1793.305 kb on + strand, within B158DRAFT_1718 at 1793.321 kb on - strand, within B158DRAFT_1718 at 1793.440 kb on - strand, within B158DRAFT_1718 at 1793.440 kb on - strand, within B158DRAFT_1718 at 1793.440 kb on - strand, within B158DRAFT_1718 at 1793.440 kb on - strand, within B158DRAFT_1718 at 1793.440 kb on - strand, within B158DRAFT_1718 at 1793.450 kb on - strand, within B158DRAFT_1718 at 1793.450 kb on - strand, within B158DRAFT_1718 at 1793.467 kb on + strand, within B158DRAFT_1718 at 1793.492 kb on - strand at 1793.492 kb on - strand at 1793.560 kb on + strand at 1793.560 kb on + strand at 1793.560 kb on + strand at 1793.568 kb on - strand at 1793.568 kb on - strand at 1793.568 kb on - strand at 1793.627 kb on + strand at 1793.635 kb on - strand at 1793.679 kb on + strand at 1793.684 kb on + strand at 1793.687 kb on - strand at 1793.692 kb on - strand at 1793.696 kb on + strand at 1793.702 kb on + strand at 1793.757 kb on + strand at 1793.765 kb on - strand at 1793.783 kb on - strand at 1793.783 kb on - strand at 1793.785 kb on + strand at 1793.860 kb on + strand at 1793.860 kb on + strand at 1793.866 kb on + strand at 1793.874 kb on + strand at 1793.882 kb on - strand at 1793.919 kb on + strand, within B158DRAFT_1719 at 1793.945 kb on + strand, within B158DRAFT_1719 at 1793.953 kb on - strand, within B158DRAFT_1719 at 1794.059 kb on - strand, within B158DRAFT_1719 at 1794.078 kb on - strand, within B158DRAFT_1719 at 1794.093 kb on + strand, within B158DRAFT_1719 at 1794.152 kb on + strand, within B158DRAFT_1719 at 1794.152 kb on + strand, within B158DRAFT_1719 at 1794.160 kb on - strand, within B158DRAFT_1719 at 1794.160 kb on - strand, within B158DRAFT_1719 at 1794.212 kb on - strand, within B158DRAFT_1719 at 1794.214 kb on + strand, within B158DRAFT_1719 at 1794.228 kb on + strand, within B158DRAFT_1719 at 1794.236 kb on - strand, within B158DRAFT_1719 at 1794.270 kb on + strand, within B158DRAFT_1719 at 1794.369 kb on - strand, within B158DRAFT_1719 at 1794.428 kb on - strand, within B158DRAFT_1719 at 1794.448 kb on - strand, within B158DRAFT_1719 at 1794.483 kb on - strand, within B158DRAFT_1719 at 1794.544 kb on + strand, within B158DRAFT_1719 at 1794.544 kb on + strand, within B158DRAFT_1719 at 1794.544 kb on + strand, within B158DRAFT_1719 at 1794.552 kb on - strand, within B158DRAFT_1719 at 1794.560 kb on - strand, within B158DRAFT_1719 at 1794.609 kb on - strand, within B158DRAFT_1719 at 1794.609 kb on - strand, within B158DRAFT_1719 at 1794.632 kb on - strand, within B158DRAFT_1719 at 1794.714 kb on + strand, within B158DRAFT_1719 at 1794.737 kb on + strand, within B158DRAFT_1719 at 1794.885 kb on + strand at 1794.885 kb on + strand at 1794.893 kb on - strand at 1794.914 kb on + strand at 1794.977 kb on + strand, within B158DRAFT_1720 at 1795.013 kb on - strand, within B158DRAFT_1720 at 1795.034 kb on + strand, within B158DRAFT_1720 at 1795.034 kb on - strand, within B158DRAFT_1720 at 1795.129 kb on + strand, within B158DRAFT_1720 at 1795.154 kb on - strand, within B158DRAFT_1720 at 1795.155 kb on + strand, within B158DRAFT_1720 at 1795.155 kb on + strand, within B158DRAFT_1720 at 1795.155 kb on + strand, within B158DRAFT_1720 at 1795.155 kb on + strand, within B158DRAFT_1720 at 1795.155 kb on + strand, within B158DRAFT_1720 at 1795.163 kb on - strand, within B158DRAFT_1720 at 1795.163 kb on - strand, within B158DRAFT_1720 at 1795.163 kb on - strand, within B158DRAFT_1720 at 1795.221 kb on + strand, within B158DRAFT_1720 at 1795.221 kb on + strand, within B158DRAFT_1720 at 1795.221 kb on + strand, within B158DRAFT_1720 at 1795.221 kb on + strand, within B158DRAFT_1720 at 1795.221 kb on + strand, within B158DRAFT_1720 at 1795.221 kb on + strand, within B158DRAFT_1720 at 1795.229 kb on - strand, within B158DRAFT_1720 at 1795.229 kb on - strand, within B158DRAFT_1720 at 1795.298 kb on + strand, within B158DRAFT_1720 at 1795.298 kb on + strand, within B158DRAFT_1720 at 1795.306 kb on - strand, within B158DRAFT_1720 at 1795.319 kb on + strand, within B158DRAFT_1720 at 1795.325 kb on - strand, within B158DRAFT_1720 at 1795.435 kb on + strand at 1795.435 kb on + strand at 1795.436 kb on + strand at 1795.443 kb on - strand at 1795.584 kb on + strand, within B158DRAFT_1721 at 1795.633 kb on + strand, within B158DRAFT_1721 at 1795.633 kb on + strand, within B158DRAFT_1721 at 1795.638 kb on + strand, within B158DRAFT_1721 at 1795.823 kb on + strand, within B158DRAFT_1721 at 1795.823 kb on + strand, within B158DRAFT_1721 at 1795.831 kb on - strand, within B158DRAFT_1721 at 1795.831 kb on - strand, within B158DRAFT_1721 at 1795.831 kb on - strand, within B158DRAFT_1721 at 1795.831 kb on - strand, within B158DRAFT_1721 at 1795.831 kb on - strand, within B158DRAFT_1721
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.021875 mg/ml remove 1,792,836 + B158DRAFT_1717 0.79 +0.3 1,793,101 - B158DRAFT_1718 0.12 -1.0 1,793,183 + B158DRAFT_1718 0.28 -0.4 1,793,191 - B158DRAFT_1718 0.30 -0.1 1,793,191 - B158DRAFT_1718 0.30 +0.1 1,793,236 + B158DRAFT_1718 0.39 -0.8 1,793,244 - B158DRAFT_1718 0.41 +0.1 1,793,244 - B158DRAFT_1718 0.41 -0.0 1,793,268 + B158DRAFT_1718 0.46 -0.2 1,793,305 + B158DRAFT_1718 0.53 +0.1 1,793,321 - B158DRAFT_1718 0.57 -0.4 1,793,440 - B158DRAFT_1718 0.81 -0.5 1,793,440 - B158DRAFT_1718 0.81 -0.8 1,793,440 - B158DRAFT_1718 0.81 -0.0 1,793,440 - B158DRAFT_1718 0.81 -0.1 1,793,440 - B158DRAFT_1718 0.81 -0.5 1,793,450 - B158DRAFT_1718 0.83 -0.2 1,793,450 - B158DRAFT_1718 0.83 -0.6 1,793,467 + B158DRAFT_1718 0.87 +0.6 1,793,492 - +0.0 1,793,492 - -0.3 1,793,560 + +0.1 1,793,560 + +0.3 1,793,560 + -1.4 1,793,568 - -0.0 1,793,568 - +0.3 1,793,568 - -0.7 1,793,627 + -0.2 1,793,635 - -1.1 1,793,679 + +0.0 1,793,684 + -0.9 1,793,687 - -0.7 1,793,692 - +0.0 1,793,696 + +0.3 1,793,702 + +0.0 1,793,757 + -0.3 1,793,765 - +0.0 1,793,783 - +0.2 1,793,783 - +0.6 1,793,785 + -0.3 1,793,860 + +0.9 1,793,860 + +0.1 1,793,866 + +0.2 1,793,874 + +0.3 1,793,882 - -0.2 1,793,919 + B158DRAFT_1719 0.10 +0.2 1,793,945 + B158DRAFT_1719 0.13 -0.5 1,793,953 - B158DRAFT_1719 0.13 -0.9 1,794,059 - B158DRAFT_1719 0.23 -0.6 1,794,078 - B158DRAFT_1719 0.25 -0.9 1,794,093 + B158DRAFT_1719 0.26 -0.1 1,794,152 + B158DRAFT_1719 0.32 +0.0 1,794,152 + B158DRAFT_1719 0.32 +0.1 1,794,160 - B158DRAFT_1719 0.33 -0.7 1,794,160 - B158DRAFT_1719 0.33 -0.4 1,794,212 - B158DRAFT_1719 0.37 -0.4 1,794,214 + B158DRAFT_1719 0.37 +0.1 1,794,228 + B158DRAFT_1719 0.39 +0.3 1,794,236 - B158DRAFT_1719 0.40 +0.0 1,794,270 + B158DRAFT_1719 0.43 -0.9 1,794,369 - B158DRAFT_1719 0.52 -0.3 1,794,428 - B158DRAFT_1719 0.57 +0.0 1,794,448 - B158DRAFT_1719 0.59 -0.6 1,794,483 - B158DRAFT_1719 0.62 +0.1 1,794,544 + B158DRAFT_1719 0.68 -0.5 1,794,544 + B158DRAFT_1719 0.68 +0.2 1,794,544 + B158DRAFT_1719 0.68 -1.2 1,794,552 - B158DRAFT_1719 0.69 -0.1 1,794,560 - B158DRAFT_1719 0.69 +0.0 1,794,609 - B158DRAFT_1719 0.74 +0.0 1,794,609 - B158DRAFT_1719 0.74 -0.7 1,794,632 - B158DRAFT_1719 0.76 -0.5 1,794,714 + B158DRAFT_1719 0.84 +0.6 1,794,737 + B158DRAFT_1719 0.86 -0.0 1,794,885 + +1.7 1,794,885 + +0.3 1,794,893 - +0.6 1,794,914 + -0.0 1,794,977 + B158DRAFT_1720 0.14 +0.4 1,795,013 - B158DRAFT_1720 0.21 -0.7 1,795,034 + B158DRAFT_1720 0.24 -0.5 1,795,034 - B158DRAFT_1720 0.24 -0.9 1,795,129 + B158DRAFT_1720 0.42 +0.1 1,795,154 - B158DRAFT_1720 0.47 -1.2 1,795,155 + B158DRAFT_1720 0.47 +0.6 1,795,155 + B158DRAFT_1720 0.47 -0.4 1,795,155 + B158DRAFT_1720 0.47 -0.7 1,795,155 + B158DRAFT_1720 0.47 -0.1 1,795,155 + B158DRAFT_1720 0.47 -0.0 1,795,163 - B158DRAFT_1720 0.48 -0.2 1,795,163 - B158DRAFT_1720 0.48 -0.1 1,795,163 - B158DRAFT_1720 0.48 -0.4 1,795,221 + B158DRAFT_1720 0.59 -0.4 1,795,221 + B158DRAFT_1720 0.59 -1.3 1,795,221 + B158DRAFT_1720 0.59 -0.0 1,795,221 + B158DRAFT_1720 0.59 -1.2 1,795,221 + B158DRAFT_1720 0.59 -0.3 1,795,221 + B158DRAFT_1720 0.59 -0.3 1,795,229 - B158DRAFT_1720 0.61 -0.7 1,795,229 - B158DRAFT_1720 0.61 -0.1 1,795,298 + B158DRAFT_1720 0.73 -0.8 1,795,298 + B158DRAFT_1720 0.73 +0.3 1,795,306 - B158DRAFT_1720 0.75 +0.0 1,795,319 + B158DRAFT_1720 0.77 -0.6 1,795,325 - B158DRAFT_1720 0.78 +0.3 1,795,435 + -0.6 1,795,435 + -0.6 1,795,436 + +0.3 1,795,443 - -2.6 1,795,584 + B158DRAFT_1721 0.17 +0.2 1,795,633 + B158DRAFT_1721 0.23 -0.3 1,795,633 + B158DRAFT_1721 0.23 -1.8 1,795,638 + B158DRAFT_1721 0.23 -0.5 1,795,823 + B158DRAFT_1721 0.46 +0.2 1,795,823 + B158DRAFT_1721 0.46 -0.8 1,795,831 - B158DRAFT_1721 0.47 -0.6 1,795,831 - B158DRAFT_1721 0.47 -0.4 1,795,831 - B158DRAFT_1721 0.47 -0.9 1,795,831 - B158DRAFT_1721 0.47 -0.3 1,795,831 - B158DRAFT_1721 0.47 +0.1
Or see this region's nucleotide sequence