Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1502

Experiment: m.b. A22 0.021875 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1500 and B158DRAFT_1501 are separated by 46 nucleotidesB158DRAFT_1501 and B158DRAFT_1502 are separated by 162 nucleotidesB158DRAFT_1502 and B158DRAFT_1503 are separated by 62 nucleotidesB158DRAFT_1503 and B158DRAFT_1504 are separated by 145 nucleotides B158DRAFT_1500: B158DRAFT_1500 - Uncharacterized conserved protein, at 1,557,511 to 1,557,849 _1500 B158DRAFT_1501: B158DRAFT_1501 - TIGR00645 family protein, at 1,557,896 to 1,558,420 _1501 B158DRAFT_1502: B158DRAFT_1502 - Phosphohistidine phosphatase SixA, at 1,558,583 to 1,559,119 _1502 B158DRAFT_1503: B158DRAFT_1503 - hypothetical protein, at 1,559,182 to 1,559,763 _1503 B158DRAFT_1504: B158DRAFT_1504 - Uncharacterized conserved protein, at 1,559,909 to 1,560,250 _1504 Position (kb) 1558 1559 1560Strain fitness (log2 ratio) -2 -1 0 1 2at 1557.599 kb on + strand, within B158DRAFT_1500at 1557.603 kb on + strand, within B158DRAFT_1500at 1557.607 kb on - strand, within B158DRAFT_1500at 1557.716 kb on + strand, within B158DRAFT_1500at 1557.775 kb on + strand, within B158DRAFT_1500at 1557.844 kb on + strandat 1557.844 kb on + strandat 1557.852 kb on - strandat 1557.860 kb on - strandat 1558.139 kb on - strand, within B158DRAFT_1501at 1558.139 kb on - strand, within B158DRAFT_1501at 1558.295 kb on + strand, within B158DRAFT_1501at 1558.579 kb on + strandat 1558.752 kb on + strand, within B158DRAFT_1502at 1558.752 kb on + strand, within B158DRAFT_1502at 1558.791 kb on - strand, within B158DRAFT_1502at 1558.809 kb on + strand, within B158DRAFT_1502at 1558.893 kb on + strand, within B158DRAFT_1502at 1558.893 kb on + strand, within B158DRAFT_1502at 1558.901 kb on - strand, within B158DRAFT_1502at 1558.901 kb on - strand, within B158DRAFT_1502at 1558.927 kb on - strand, within B158DRAFT_1502at 1558.962 kb on + strand, within B158DRAFT_1502at 1558.962 kb on + strand, within B158DRAFT_1502at 1558.970 kb on - strand, within B158DRAFT_1502at 1558.992 kb on - strand, within B158DRAFT_1502at 1559.014 kb on + strand, within B158DRAFT_1502at 1559.048 kb on + strand, within B158DRAFT_1502at 1559.122 kb on + strandat 1559.130 kb on - strandat 1559.282 kb on + strand, within B158DRAFT_1503at 1559.282 kb on + strand, within B158DRAFT_1503at 1559.290 kb on - strand, within B158DRAFT_1503at 1559.290 kb on - strand, within B158DRAFT_1503at 1559.320 kb on + strand, within B158DRAFT_1503at 1559.350 kb on + strand, within B158DRAFT_1503at 1559.358 kb on - strand, within B158DRAFT_1503at 1559.358 kb on - strand, within B158DRAFT_1503at 1559.376 kb on + strand, within B158DRAFT_1503at 1559.389 kb on - strand, within B158DRAFT_1503at 1559.403 kb on - strand, within B158DRAFT_1503at 1559.590 kb on - strand, within B158DRAFT_1503at 1559.602 kb on + strand, within B158DRAFT_1503at 1559.667 kb on - strand, within B158DRAFT_1503at 1559.677 kb on - strand, within B158DRAFT_1503at 1559.689 kb on - strand, within B158DRAFT_1503at 1559.705 kb on + strandat 1559.707 kb on + strandat 1559.713 kb on + strandat 1559.714 kb on - strandat 1559.800 kb on + strandat 1559.855 kb on + strandat 1559.955 kb on + strand, within B158DRAFT_1504at 1559.963 kb on - strand, within B158DRAFT_1504at 1559.963 kb on - strand, within B158DRAFT_1504at 1559.963 kb on - strand, within B158DRAFT_1504at 1559.974 kb on - strand, within B158DRAFT_1504at 1560.033 kb on + strand, within B158DRAFT_1504at 1560.034 kb on - strand, within B158DRAFT_1504at 1560.112 kb on - strand, within B158DRAFT_1504

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. A22 0.021875 mg/ml
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1,557,599 + B158DRAFT_1500 0.26 +0.0
1,557,603 + B158DRAFT_1500 0.27 -0.2
1,557,607 - B158DRAFT_1500 0.28 -1.0
1,557,716 + B158DRAFT_1500 0.60 -1.0
1,557,775 + B158DRAFT_1500 0.78 -0.6
1,557,844 + +0.5
1,557,844 + +0.1
1,557,852 - -1.0
1,557,860 - -0.2
1,558,139 - B158DRAFT_1501 0.46 -1.7
1,558,139 - B158DRAFT_1501 0.46 +0.2
1,558,295 + B158DRAFT_1501 0.76 -1.7
1,558,579 + -0.2
1,558,752 + B158DRAFT_1502 0.31 +0.4
1,558,752 + B158DRAFT_1502 0.31 -0.6
1,558,791 - B158DRAFT_1502 0.39 -0.4
1,558,809 + B158DRAFT_1502 0.42 -0.2
1,558,893 + B158DRAFT_1502 0.58 +0.2
1,558,893 + B158DRAFT_1502 0.58 -0.6
1,558,901 - B158DRAFT_1502 0.59 -0.3
1,558,901 - B158DRAFT_1502 0.59 -0.3
1,558,927 - B158DRAFT_1502 0.64 -0.7
1,558,962 + B158DRAFT_1502 0.71 +0.1
1,558,962 + B158DRAFT_1502 0.71 -2.7
1,558,970 - B158DRAFT_1502 0.72 -0.5
1,558,992 - B158DRAFT_1502 0.76 -1.1
1,559,014 + B158DRAFT_1502 0.80 +0.0
1,559,048 + B158DRAFT_1502 0.87 -0.2
1,559,122 + -0.2
1,559,130 - +0.9
1,559,282 + B158DRAFT_1503 0.17 +0.6
1,559,282 + B158DRAFT_1503 0.17 +0.3
1,559,290 - B158DRAFT_1503 0.19 -0.8
1,559,290 - B158DRAFT_1503 0.19 -0.4
1,559,320 + B158DRAFT_1503 0.24 -0.8
1,559,350 + B158DRAFT_1503 0.29 -0.0
1,559,358 - B158DRAFT_1503 0.30 -0.7
1,559,358 - B158DRAFT_1503 0.30 -0.7
1,559,376 + B158DRAFT_1503 0.33 +0.3
1,559,389 - B158DRAFT_1503 0.36 -0.6
1,559,403 - B158DRAFT_1503 0.38 +0.3
1,559,590 - B158DRAFT_1503 0.70 +0.5
1,559,602 + B158DRAFT_1503 0.72 -0.1
1,559,667 - B158DRAFT_1503 0.83 -0.6
1,559,677 - B158DRAFT_1503 0.85 +0.0
1,559,689 - B158DRAFT_1503 0.87 -0.5
1,559,705 + +0.5
1,559,707 + +0.4
1,559,713 + +0.2
1,559,714 - +0.3
1,559,800 + -0.5
1,559,855 + +0.9
1,559,955 + B158DRAFT_1504 0.13 +1.8
1,559,963 - B158DRAFT_1504 0.16 +1.7
1,559,963 - B158DRAFT_1504 0.16 +1.4
1,559,963 - B158DRAFT_1504 0.16 +0.5
1,559,974 - B158DRAFT_1504 0.19 +1.3
1,560,033 + B158DRAFT_1504 0.36 -0.1
1,560,034 - B158DRAFT_1504 0.37 +1.7
1,560,112 - B158DRAFT_1504 0.59 +1.3

Or see this region's nucleotide sequence