Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0965

Experiment: m.b. A22 0.021875 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0963 and B158DRAFT_0965 are separated by 572 nucleotidesB158DRAFT_0965 and B158DRAFT_0966 are separated by 12 nucleotidesB158DRAFT_0966 and B158DRAFT_0967 are separated by 6 nucleotides B158DRAFT_0963: B158DRAFT_0963 - Site-specific recombinase XerD, at 994,390 to 996,174 _0963 B158DRAFT_0965: B158DRAFT_0965 - Serine/threonine protein phosphatase, at 996,747 to 997,550 _0965 B158DRAFT_0966: B158DRAFT_0966 - FOG: FHA domain, at 997,563 to 998,111 _0966 B158DRAFT_0967: B158DRAFT_0967 - Serine/threonine protein kinase, at 998,118 to 999,821 _0967 Position (kb) 996 997 998Strain fitness (log2 ratio) -3 -2 -1 0 1at 995.817 kb on + strand, within B158DRAFT_0963at 995.903 kb on - strand, within B158DRAFT_0963at 996.014 kb on + strandat 996.024 kb on + strandat 996.024 kb on + strandat 996.032 kb on - strandat 996.032 kb on - strandat 996.032 kb on - strandat 996.106 kb on + strandat 996.114 kb on - strandat 996.306 kb on + strandat 996.306 kb on + strandat 996.314 kb on - strandat 996.314 kb on - strandat 996.321 kb on - strandat 996.392 kb on + strandat 996.400 kb on - strandat 996.407 kb on + strandat 996.408 kb on - strandat 996.415 kb on - strandat 996.442 kb on - strandat 996.443 kb on + strandat 996.443 kb on + strandat 996.443 kb on + strandat 996.443 kb on + strandat 996.451 kb on - strandat 996.451 kb on - strandat 996.463 kb on + strandat 996.481 kb on + strandat 996.489 kb on - strandat 996.489 kb on - strandat 996.578 kb on - strandat 996.637 kb on - strandat 996.637 kb on - strandat 996.714 kb on + strandat 996.722 kb on - strandat 996.745 kb on - strandat 996.843 kb on + strand, within B158DRAFT_0965at 996.887 kb on - strand, within B158DRAFT_0965at 996.945 kb on + strand, within B158DRAFT_0965at 996.945 kb on + strand, within B158DRAFT_0965at 996.946 kb on + strand, within B158DRAFT_0965at 996.946 kb on + strand, within B158DRAFT_0965at 996.946 kb on + strand, within B158DRAFT_0965at 996.954 kb on - strand, within B158DRAFT_0965at 996.961 kb on + strand, within B158DRAFT_0965at 996.969 kb on - strand, within B158DRAFT_0965at 997.120 kb on + strand, within B158DRAFT_0965at 997.152 kb on + strand, within B158DRAFT_0965at 997.190 kb on - strand, within B158DRAFT_0965at 997.232 kb on - strand, within B158DRAFT_0965at 997.244 kb on + strand, within B158DRAFT_0965at 997.254 kb on + strand, within B158DRAFT_0965at 997.254 kb on + strand, within B158DRAFT_0965at 997.254 kb on + strand, within B158DRAFT_0965at 997.254 kb on + strand, within B158DRAFT_0965at 997.262 kb on - strand, within B158DRAFT_0965at 997.262 kb on - strand, within B158DRAFT_0965at 997.335 kb on - strand, within B158DRAFT_0965at 997.359 kb on + strand, within B158DRAFT_0965at 997.367 kb on - strand, within B158DRAFT_0965at 997.465 kb on + strand, within B158DRAFT_0965at 997.552 kb on - strandat 997.557 kb on - strandat 997.790 kb on + strand, within B158DRAFT_0966at 997.790 kb on + strand, within B158DRAFT_0966at 997.798 kb on - strand, within B158DRAFT_0966at 997.798 kb on - strand, within B158DRAFT_0966at 997.798 kb on - strand, within B158DRAFT_0966at 997.798 kb on - strand, within B158DRAFT_0966at 997.798 kb on - strand, within B158DRAFT_0966at 997.798 kb on - strand, within B158DRAFT_0966at 997.820 kb on - strand, within B158DRAFT_0966at 997.831 kb on + strand, within B158DRAFT_0966at 997.855 kb on + strand, within B158DRAFT_0966at 997.915 kb on - strand, within B158DRAFT_0966at 998.128 kb on + strandat 998.134 kb on - strandat 998.196 kb on - strandat 998.440 kb on + strand, within B158DRAFT_0967at 998.440 kb on + strand, within B158DRAFT_0967at 998.440 kb on + strand, within B158DRAFT_0967at 998.448 kb on - strand, within B158DRAFT_0967at 998.476 kb on + strand, within B158DRAFT_0967at 998.484 kb on - strand, within B158DRAFT_0967

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. A22 0.021875 mg/ml
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995,817 + B158DRAFT_0963 0.80 -0.8
995,903 - B158DRAFT_0963 0.85 +0.9
996,014 + -0.7
996,024 + +0.0
996,024 + -0.6
996,032 - +0.1
996,032 - -0.2
996,032 - +0.0
996,106 + +0.3
996,114 - -0.7
996,306 + +0.5
996,306 + -1.3
996,314 - +0.4
996,314 - +0.7
996,321 - +0.1
996,392 + -0.5
996,400 - -0.9
996,407 + -0.9
996,408 - +0.6
996,415 - -2.8
996,442 - -0.3
996,443 + +0.3
996,443 + -1.6
996,443 + -0.4
996,443 + -0.4
996,451 - -0.1
996,451 - -0.4
996,463 + -1.1
996,481 + -0.6
996,489 - -0.6
996,489 - +0.2
996,578 - -2.4
996,637 - -1.2
996,637 - -0.1
996,714 + +0.1
996,722 - +0.4
996,745 - +0.6
996,843 + B158DRAFT_0965 0.12 +0.5
996,887 - B158DRAFT_0965 0.17 +0.5
996,945 + B158DRAFT_0965 0.25 +0.3
996,945 + B158DRAFT_0965 0.25 -0.3
996,946 + B158DRAFT_0965 0.25 +1.1
996,946 + B158DRAFT_0965 0.25 +0.7
996,946 + B158DRAFT_0965 0.25 +0.3
996,954 - B158DRAFT_0965 0.26 +0.7
996,961 + B158DRAFT_0965 0.27 +0.9
996,969 - B158DRAFT_0965 0.28 +0.4
997,120 + B158DRAFT_0965 0.46 +0.8
997,152 + B158DRAFT_0965 0.50 +0.9
997,190 - B158DRAFT_0965 0.55 +1.0
997,232 - B158DRAFT_0965 0.60 +0.5
997,244 + B158DRAFT_0965 0.62 +0.7
997,254 + B158DRAFT_0965 0.63 +1.1
997,254 + B158DRAFT_0965 0.63 -0.1
997,254 + B158DRAFT_0965 0.63 +1.1
997,254 + B158DRAFT_0965 0.63 +0.4
997,262 - B158DRAFT_0965 0.64 +0.7
997,262 - B158DRAFT_0965 0.64 +0.5
997,335 - B158DRAFT_0965 0.73 +1.1
997,359 + B158DRAFT_0965 0.76 +1.3
997,367 - B158DRAFT_0965 0.77 -0.2
997,465 + B158DRAFT_0965 0.89 +0.5
997,552 - +0.4
997,557 - +0.9
997,790 + B158DRAFT_0966 0.41 +0.8
997,790 + B158DRAFT_0966 0.41 +0.5
997,798 - B158DRAFT_0966 0.43 +0.9
997,798 - B158DRAFT_0966 0.43 +0.3
997,798 - B158DRAFT_0966 0.43 +0.0
997,798 - B158DRAFT_0966 0.43 +0.5
997,798 - B158DRAFT_0966 0.43 +0.7
997,798 - B158DRAFT_0966 0.43 +0.1
997,820 - B158DRAFT_0966 0.47 +0.3
997,831 + B158DRAFT_0966 0.49 +1.1
997,855 + B158DRAFT_0966 0.53 +0.8
997,915 - B158DRAFT_0966 0.64 +1.3
998,128 + -0.4
998,134 - -0.0
998,196 - +0.0
998,440 + B158DRAFT_0967 0.19 +0.0
998,440 + B158DRAFT_0967 0.19 -0.6
998,440 + B158DRAFT_0967 0.19 -0.4
998,448 - B158DRAFT_0967 0.19 +0.5
998,476 + B158DRAFT_0967 0.21 +0.1
998,484 - B158DRAFT_0967 0.21 -0.4

Or see this region's nucleotide sequence