Experiment: m.b. A22 0.021875 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0138 and B158DRAFT_0139 overlap by 4 nucleotides B158DRAFT_0139 and B158DRAFT_0140 are separated by 26 nucleotides B158DRAFT_0140 and B158DRAFT_0141 are separated by 108 nucleotides B158DRAFT_0141 and B158DRAFT_0142 are separated by 126 nucleotides
B158DRAFT_0138: B158DRAFT_0138 - hypothetical protein, at 136,441 to 137,190
_0138
B158DRAFT_0139: B158DRAFT_0139 - RNA polymerase sigma factor, sigma-70 family, at 137,187 to 137,876
_0139
B158DRAFT_0140: B158DRAFT_0140 - Uncharacterized protein containing a von Willebrand factor type A (vWA) domain, at 137,903 to 139,648
_0140
B158DRAFT_0141: B158DRAFT_0141 - thioesterase domain, putative, at 139,757 to 140,230
_0141
B158DRAFT_0142: B158DRAFT_0142 - ABC-type phosphate transport system, periplasmic component, at 140,357 to 141,736
_0142
Position (kb) 137
138
139
140 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 136.909 kb on + strand, within B158DRAFT_0138 at 137.008 kb on - strand, within B158DRAFT_0138 at 137.010 kb on + strand, within B158DRAFT_0138 at 137.028 kb on + strand, within B158DRAFT_0138 at 137.042 kb on - strand, within B158DRAFT_0138 at 137.109 kb on + strand, within B158DRAFT_0138 at 137.240 kb on + strand at 137.245 kb on - strand at 137.272 kb on + strand, within B158DRAFT_0139 at 137.272 kb on + strand, within B158DRAFT_0139 at 137.272 kb on + strand, within B158DRAFT_0139 at 137.272 kb on + strand, within B158DRAFT_0139 at 137.272 kb on + strand, within B158DRAFT_0139 at 137.272 kb on + strand, within B158DRAFT_0139 at 137.272 kb on + strand, within B158DRAFT_0139 at 137.279 kb on + strand, within B158DRAFT_0139 at 137.280 kb on - strand, within B158DRAFT_0139 at 137.280 kb on - strand, within B158DRAFT_0139 at 137.280 kb on - strand, within B158DRAFT_0139 at 137.280 kb on - strand, within B158DRAFT_0139 at 137.280 kb on - strand, within B158DRAFT_0139 at 137.280 kb on - strand, within B158DRAFT_0139 at 137.280 kb on - strand, within B158DRAFT_0139 at 137.280 kb on - strand, within B158DRAFT_0139 at 137.280 kb on - strand, within B158DRAFT_0139 at 137.280 kb on - strand, within B158DRAFT_0139 at 137.280 kb on - strand, within B158DRAFT_0139 at 137.280 kb on - strand, within B158DRAFT_0139 at 137.280 kb on - strand, within B158DRAFT_0139 at 137.280 kb on - strand, within B158DRAFT_0139 at 137.280 kb on - strand, within B158DRAFT_0139 at 137.280 kb on - strand, within B158DRAFT_0139 at 137.298 kb on + strand, within B158DRAFT_0139 at 137.351 kb on - strand, within B158DRAFT_0139 at 137.482 kb on + strand, within B158DRAFT_0139 at 137.482 kb on + strand, within B158DRAFT_0139 at 137.482 kb on + strand, within B158DRAFT_0139 at 137.490 kb on - strand, within B158DRAFT_0139 at 137.490 kb on - strand, within B158DRAFT_0139 at 137.490 kb on - strand, within B158DRAFT_0139 at 137.490 kb on - strand, within B158DRAFT_0139 at 137.490 kb on - strand, within B158DRAFT_0139 at 137.490 kb on - strand, within B158DRAFT_0139 at 137.490 kb on - strand, within B158DRAFT_0139 at 137.490 kb on - strand, within B158DRAFT_0139 at 137.490 kb on - strand, within B158DRAFT_0139 at 137.550 kb on - strand, within B158DRAFT_0139 at 137.567 kb on - strand, within B158DRAFT_0139 at 137.567 kb on - strand, within B158DRAFT_0139 at 137.578 kb on + strand, within B158DRAFT_0139 at 137.596 kb on - strand, within B158DRAFT_0139 at 137.690 kb on + strand, within B158DRAFT_0139 at 137.711 kb on - strand, within B158DRAFT_0139 at 137.726 kb on + strand, within B158DRAFT_0139 at 137.743 kb on - strand, within B158DRAFT_0139 at 137.772 kb on - strand, within B158DRAFT_0139 at 137.800 kb on + strand, within B158DRAFT_0139 at 137.800 kb on + strand, within B158DRAFT_0139 at 137.800 kb on + strand, within B158DRAFT_0139 at 137.808 kb on - strand at 137.808 kb on - strand at 137.808 kb on - strand at 137.810 kb on + strand at 137.905 kb on + strand at 137.910 kb on + strand at 137.910 kb on + strand at 137.910 kb on + strand at 137.918 kb on - strand at 137.923 kb on - strand at 137.923 kb on - strand at 137.931 kb on + strand at 137.939 kb on - strand at 137.942 kb on - strand at 137.942 kb on - strand at 138.009 kb on + strand at 138.009 kb on + strand at 138.017 kb on + strand at 138.017 kb on - strand at 138.025 kb on - strand at 138.035 kb on + strand at 138.069 kb on - strand at 138.069 kb on - strand at 138.094 kb on + strand, within B158DRAFT_0140 at 138.102 kb on - strand, within B158DRAFT_0140 at 138.102 kb on - strand, within B158DRAFT_0140 at 138.123 kb on - strand, within B158DRAFT_0140 at 138.141 kb on + strand, within B158DRAFT_0140 at 138.168 kb on - strand, within B158DRAFT_0140 at 138.262 kb on + strand, within B158DRAFT_0140 at 138.270 kb on + strand, within B158DRAFT_0140 at 138.295 kb on + strand, within B158DRAFT_0140 at 138.313 kb on - strand, within B158DRAFT_0140 at 138.323 kb on - strand, within B158DRAFT_0140 at 138.323 kb on - strand, within B158DRAFT_0140 at 138.333 kb on - strand, within B158DRAFT_0140 at 138.368 kb on - strand, within B158DRAFT_0140 at 138.566 kb on - strand, within B158DRAFT_0140 at 138.571 kb on - strand, within B158DRAFT_0140 at 138.602 kb on - strand, within B158DRAFT_0140 at 138.633 kb on - strand, within B158DRAFT_0140 at 138.741 kb on + strand, within B158DRAFT_0140 at 138.747 kb on + strand, within B158DRAFT_0140 at 138.747 kb on + strand, within B158DRAFT_0140 at 138.749 kb on - strand, within B158DRAFT_0140 at 138.835 kb on + strand, within B158DRAFT_0140 at 138.835 kb on + strand, within B158DRAFT_0140 at 138.843 kb on - strand, within B158DRAFT_0140 at 138.843 kb on - strand, within B158DRAFT_0140 at 138.866 kb on - strand, within B158DRAFT_0140 at 138.912 kb on + strand, within B158DRAFT_0140 at 138.912 kb on + strand, within B158DRAFT_0140 at 138.917 kb on + strand, within B158DRAFT_0140 at 138.917 kb on + strand, within B158DRAFT_0140 at 138.922 kb on + strand, within B158DRAFT_0140 at 138.925 kb on - strand, within B158DRAFT_0140 at 138.927 kb on + strand, within B158DRAFT_0140 at 138.935 kb on - strand, within B158DRAFT_0140 at 138.967 kb on + strand, within B158DRAFT_0140 at 139.021 kb on + strand, within B158DRAFT_0140 at 139.021 kb on + strand, within B158DRAFT_0140 at 139.048 kb on - strand, within B158DRAFT_0140 at 139.110 kb on - strand, within B158DRAFT_0140 at 139.115 kb on - strand, within B158DRAFT_0140 at 139.155 kb on - strand, within B158DRAFT_0140 at 139.155 kb on - strand, within B158DRAFT_0140 at 139.211 kb on - strand, within B158DRAFT_0140 at 139.270 kb on + strand, within B158DRAFT_0140 at 139.411 kb on + strand, within B158DRAFT_0140 at 139.411 kb on + strand, within B158DRAFT_0140 at 139.411 kb on + strand, within B158DRAFT_0140 at 139.411 kb on + strand, within B158DRAFT_0140 at 139.411 kb on + strand, within B158DRAFT_0140 at 139.411 kb on + strand, within B158DRAFT_0140 at 139.411 kb on + strand, within B158DRAFT_0140 at 139.411 kb on + strand, within B158DRAFT_0140 at 139.411 kb on + strand, within B158DRAFT_0140 at 139.411 kb on + strand, within B158DRAFT_0140 at 139.411 kb on + strand, within B158DRAFT_0140 at 139.411 kb on + strand, within B158DRAFT_0140 at 139.411 kb on + strand, within B158DRAFT_0140 at 139.411 kb on - strand, within B158DRAFT_0140 at 139.419 kb on - strand, within B158DRAFT_0140 at 139.419 kb on - strand, within B158DRAFT_0140 at 139.419 kb on - strand, within B158DRAFT_0140 at 139.419 kb on - strand, within B158DRAFT_0140 at 139.419 kb on - strand, within B158DRAFT_0140 at 139.419 kb on - strand, within B158DRAFT_0140 at 139.493 kb on - strand at 139.495 kb on + strand at 139.517 kb on - strand at 139.538 kb on + strand at 139.548 kb on - strand at 139.616 kb on + strand at 139.680 kb on + strand at 139.698 kb on + strand at 139.699 kb on - strand at 139.706 kb on - strand at 139.725 kb on - strand at 139.725 kb on - strand at 139.778 kb on + strand at 139.786 kb on - strand at 139.796 kb on - strand at 139.807 kb on + strand, within B158DRAFT_0141 at 139.828 kb on + strand, within B158DRAFT_0141 at 139.834 kb on + strand, within B158DRAFT_0141 at 139.836 kb on - strand, within B158DRAFT_0141 at 139.843 kb on + strand, within B158DRAFT_0141 at 139.864 kb on - strand, within B158DRAFT_0141 at 139.872 kb on + strand, within B158DRAFT_0141 at 139.872 kb on + strand, within B158DRAFT_0141 at 139.872 kb on + strand, within B158DRAFT_0141 at 139.872 kb on + strand, within B158DRAFT_0141 at 139.872 kb on + strand, within B158DRAFT_0141 at 139.880 kb on - strand, within B158DRAFT_0141 at 139.880 kb on - strand, within B158DRAFT_0141 at 139.880 kb on - strand, within B158DRAFT_0141 at 139.880 kb on - strand, within B158DRAFT_0141 at 139.925 kb on - strand, within B158DRAFT_0141 at 139.937 kb on + strand, within B158DRAFT_0141 at 139.981 kb on - strand, within B158DRAFT_0141 at 140.013 kb on - strand, within B158DRAFT_0141 at 140.015 kb on + strand, within B158DRAFT_0141 at 140.015 kb on + strand, within B158DRAFT_0141 at 140.015 kb on + strand, within B158DRAFT_0141 at 140.015 kb on + strand, within B158DRAFT_0141 at 140.015 kb on + strand, within B158DRAFT_0141 at 140.023 kb on - strand, within B158DRAFT_0141 at 140.023 kb on - strand, within B158DRAFT_0141 at 140.023 kb on - strand, within B158DRAFT_0141 at 140.023 kb on - strand, within B158DRAFT_0141 at 140.023 kb on - strand, within B158DRAFT_0141 at 140.023 kb on - strand, within B158DRAFT_0141 at 140.025 kb on + strand, within B158DRAFT_0141 at 140.033 kb on - strand, within B158DRAFT_0141 at 140.080 kb on + strand, within B158DRAFT_0141 at 140.081 kb on - strand, within B158DRAFT_0141 at 140.088 kb on - strand, within B158DRAFT_0141 at 140.351 kb on - strand at 140.504 kb on + strand, within B158DRAFT_0142 at 140.505 kb on + strand, within B158DRAFT_0142 at 140.514 kb on + strand, within B158DRAFT_0142 at 140.540 kb on - strand, within B158DRAFT_0142 at 140.540 kb on - strand, within B158DRAFT_0142 at 140.572 kb on + strand, within B158DRAFT_0142
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.021875 mg/ml remove 136,909 + B158DRAFT_0138 0.62 -0.6 137,008 - B158DRAFT_0138 0.76 -1.4 137,010 + B158DRAFT_0138 0.76 -1.0 137,028 + B158DRAFT_0138 0.78 -0.8 137,042 - B158DRAFT_0138 0.80 -1.6 137,109 + B158DRAFT_0138 0.89 -1.5 137,240 + -0.9 137,245 - +0.3 137,272 + B158DRAFT_0139 0.12 +0.4 137,272 + B158DRAFT_0139 0.12 -0.2 137,272 + B158DRAFT_0139 0.12 -0.4 137,272 + B158DRAFT_0139 0.12 -0.0 137,272 + B158DRAFT_0139 0.12 +0.6 137,272 + B158DRAFT_0139 0.12 -0.2 137,272 + B158DRAFT_0139 0.12 -0.4 137,279 + B158DRAFT_0139 0.13 -0.0 137,280 - B158DRAFT_0139 0.13 +0.1 137,280 - B158DRAFT_0139 0.13 -0.6 137,280 - B158DRAFT_0139 0.13 -1.1 137,280 - B158DRAFT_0139 0.13 -0.0 137,280 - B158DRAFT_0139 0.13 +0.0 137,280 - B158DRAFT_0139 0.13 -0.8 137,280 - B158DRAFT_0139 0.13 -0.6 137,280 - B158DRAFT_0139 0.13 -2.2 137,280 - B158DRAFT_0139 0.13 -1.1 137,280 - B158DRAFT_0139 0.13 -0.6 137,280 - B158DRAFT_0139 0.13 -0.2 137,280 - B158DRAFT_0139 0.13 +0.3 137,280 - B158DRAFT_0139 0.13 -0.7 137,280 - B158DRAFT_0139 0.13 +0.6 137,280 - B158DRAFT_0139 0.13 -0.1 137,280 - B158DRAFT_0139 0.13 -0.1 137,298 + B158DRAFT_0139 0.16 -0.1 137,351 - B158DRAFT_0139 0.24 +0.2 137,482 + B158DRAFT_0139 0.43 -0.1 137,482 + B158DRAFT_0139 0.43 -0.1 137,482 + B158DRAFT_0139 0.43 +0.1 137,490 - B158DRAFT_0139 0.44 -0.1 137,490 - B158DRAFT_0139 0.44 -0.6 137,490 - B158DRAFT_0139 0.44 -1.4 137,490 - B158DRAFT_0139 0.44 -0.1 137,490 - B158DRAFT_0139 0.44 +0.8 137,490 - B158DRAFT_0139 0.44 +0.5 137,490 - B158DRAFT_0139 0.44 -0.2 137,490 - B158DRAFT_0139 0.44 +0.1 137,490 - B158DRAFT_0139 0.44 -0.1 137,550 - B158DRAFT_0139 0.53 -0.3 137,567 - B158DRAFT_0139 0.55 +0.1 137,567 - B158DRAFT_0139 0.55 -0.7 137,578 + B158DRAFT_0139 0.57 -1.9 137,596 - B158DRAFT_0139 0.59 -0.4 137,690 + B158DRAFT_0139 0.73 -0.7 137,711 - B158DRAFT_0139 0.76 -1.6 137,726 + B158DRAFT_0139 0.78 -0.7 137,743 - B158DRAFT_0139 0.81 +0.1 137,772 - B158DRAFT_0139 0.85 +1.6 137,800 + B158DRAFT_0139 0.89 +0.1 137,800 + B158DRAFT_0139 0.89 -1.5 137,800 + B158DRAFT_0139 0.89 -0.1 137,808 - -0.6 137,808 - +0.2 137,808 - +0.7 137,810 + +0.5 137,905 + +0.5 137,910 + -0.0 137,910 + -0.7 137,910 + +0.6 137,918 - -1.2 137,923 - -0.2 137,923 - +0.0 137,931 + -0.7 137,939 - +0.1 137,942 - -0.5 137,942 - -0.7 138,009 + +0.9 138,009 + -1.8 138,017 + +0.3 138,017 - -1.0 138,025 - -0.3 138,035 + -0.1 138,069 - -1.8 138,069 - -0.3 138,094 + B158DRAFT_0140 0.11 -1.6 138,102 - B158DRAFT_0140 0.11 +0.2 138,102 - B158DRAFT_0140 0.11 +0.1 138,123 - B158DRAFT_0140 0.13 +0.1 138,141 + B158DRAFT_0140 0.14 -2.0 138,168 - B158DRAFT_0140 0.15 +1.0 138,262 + B158DRAFT_0140 0.21 +0.5 138,270 + B158DRAFT_0140 0.21 -0.1 138,295 + B158DRAFT_0140 0.22 -0.2 138,313 - B158DRAFT_0140 0.23 +0.1 138,323 - B158DRAFT_0140 0.24 -0.1 138,323 - B158DRAFT_0140 0.24 +0.0 138,333 - B158DRAFT_0140 0.25 +0.0 138,368 - B158DRAFT_0140 0.27 -0.4 138,566 - B158DRAFT_0140 0.38 -0.2 138,571 - B158DRAFT_0140 0.38 -0.1 138,602 - B158DRAFT_0140 0.40 -0.6 138,633 - B158DRAFT_0140 0.42 +1.6 138,741 + B158DRAFT_0140 0.48 +1.2 138,747 + B158DRAFT_0140 0.48 +0.4 138,747 + B158DRAFT_0140 0.48 -0.3 138,749 - B158DRAFT_0140 0.48 +0.5 138,835 + B158DRAFT_0140 0.53 -0.0 138,835 + B158DRAFT_0140 0.53 -0.2 138,843 - B158DRAFT_0140 0.54 +0.2 138,843 - B158DRAFT_0140 0.54 +0.0 138,866 - B158DRAFT_0140 0.55 -0.0 138,912 + B158DRAFT_0140 0.58 +0.2 138,912 + B158DRAFT_0140 0.58 +0.5 138,917 + B158DRAFT_0140 0.58 +1.1 138,917 + B158DRAFT_0140 0.58 -0.0 138,922 + B158DRAFT_0140 0.58 +0.0 138,925 - B158DRAFT_0140 0.59 -0.0 138,927 + B158DRAFT_0140 0.59 +0.2 138,935 - B158DRAFT_0140 0.59 +0.5 138,967 + B158DRAFT_0140 0.61 +0.7 139,021 + B158DRAFT_0140 0.64 +0.2 139,021 + B158DRAFT_0140 0.64 -1.3 139,048 - B158DRAFT_0140 0.66 -0.3 139,110 - B158DRAFT_0140 0.69 +0.1 139,115 - B158DRAFT_0140 0.69 +0.7 139,155 - B158DRAFT_0140 0.72 -0.2 139,155 - B158DRAFT_0140 0.72 +0.1 139,211 - B158DRAFT_0140 0.75 -0.5 139,270 + B158DRAFT_0140 0.78 +0.2 139,411 + B158DRAFT_0140 0.86 -0.5 139,411 + B158DRAFT_0140 0.86 -0.3 139,411 + B158DRAFT_0140 0.86 +0.3 139,411 + B158DRAFT_0140 0.86 +0.4 139,411 + B158DRAFT_0140 0.86 +0.4 139,411 + B158DRAFT_0140 0.86 +0.2 139,411 + B158DRAFT_0140 0.86 -1.0 139,411 + B158DRAFT_0140 0.86 -0.3 139,411 + B158DRAFT_0140 0.86 +1.3 139,411 + B158DRAFT_0140 0.86 -0.1 139,411 + B158DRAFT_0140 0.86 +0.4 139,411 + B158DRAFT_0140 0.86 -0.2 139,411 + B158DRAFT_0140 0.86 +0.2 139,411 - B158DRAFT_0140 0.86 +1.2 139,419 - B158DRAFT_0140 0.87 +0.1 139,419 - B158DRAFT_0140 0.87 -0.0 139,419 - B158DRAFT_0140 0.87 -0.3 139,419 - B158DRAFT_0140 0.87 +0.1 139,419 - B158DRAFT_0140 0.87 -0.2 139,419 - B158DRAFT_0140 0.87 -0.1 139,493 - -0.3 139,495 + +0.2 139,517 - +0.3 139,538 + -0.7 139,548 - +0.1 139,616 + -0.5 139,680 + -2.8 139,698 + -0.3 139,699 - -0.9 139,706 - -0.6 139,725 - -0.3 139,725 - -0.6 139,778 + -1.6 139,786 - +0.1 139,796 - -1.6 139,807 + B158DRAFT_0141 0.11 -0.3 139,828 + B158DRAFT_0141 0.15 -0.4 139,834 + B158DRAFT_0141 0.16 +0.1 139,836 - B158DRAFT_0141 0.17 -0.6 139,843 + B158DRAFT_0141 0.18 -0.1 139,864 - B158DRAFT_0141 0.23 +0.6 139,872 + B158DRAFT_0141 0.24 -1.5 139,872 + B158DRAFT_0141 0.24 -0.3 139,872 + B158DRAFT_0141 0.24 +0.0 139,872 + B158DRAFT_0141 0.24 -0.2 139,872 + B158DRAFT_0141 0.24 -0.2 139,880 - B158DRAFT_0141 0.26 -0.3 139,880 - B158DRAFT_0141 0.26 -0.4 139,880 - B158DRAFT_0141 0.26 +0.1 139,880 - B158DRAFT_0141 0.26 -0.2 139,925 - B158DRAFT_0141 0.35 +0.2 139,937 + B158DRAFT_0141 0.38 +0.0 139,981 - B158DRAFT_0141 0.47 -0.1 140,013 - B158DRAFT_0141 0.54 -1.1 140,015 + B158DRAFT_0141 0.54 +0.5 140,015 + B158DRAFT_0141 0.54 -0.0 140,015 + B158DRAFT_0141 0.54 -0.1 140,015 + B158DRAFT_0141 0.54 +0.4 140,015 + B158DRAFT_0141 0.54 -0.0 140,023 - B158DRAFT_0141 0.56 -0.2 140,023 - B158DRAFT_0141 0.56 +0.4 140,023 - B158DRAFT_0141 0.56 +0.2 140,023 - B158DRAFT_0141 0.56 -0.2 140,023 - B158DRAFT_0141 0.56 +0.2 140,023 - B158DRAFT_0141 0.56 -0.7 140,025 + B158DRAFT_0141 0.57 -0.1 140,033 - B158DRAFT_0141 0.58 +0.3 140,080 + B158DRAFT_0141 0.68 -0.8 140,081 - B158DRAFT_0141 0.68 -0.6 140,088 - B158DRAFT_0141 0.70 -0.9 140,351 - -0.2 140,504 + B158DRAFT_0142 0.11 -1.1 140,505 + B158DRAFT_0142 0.11 +0.5 140,514 + B158DRAFT_0142 0.11 -0.7 140,540 - B158DRAFT_0142 0.13 +0.0 140,540 - B158DRAFT_0142 0.13 -0.1 140,572 + B158DRAFT_0142 0.16 -1.1
Or see this region's nucleotide sequence