Experiment: m.b. A22 0.021875 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0112 and B158DRAFT_0113 are separated by 462 nucleotides B158DRAFT_0113 and B158DRAFT_0114 are separated by 324 nucleotides B158DRAFT_0114 and B158DRAFT_0115 overlap by 4 nucleotides
B158DRAFT_0112: B158DRAFT_0112 - Uncharacterized protein conserved in bacteria, at 108,835 to 109,287
_0112
B158DRAFT_0113: B158DRAFT_0113 - tRNA_Met_CAT, at 109,750 to 109,826
_0113
B158DRAFT_0114: B158DRAFT_0114 - NADH dehydrogenase subunit N (EC 1.6.5.3), at 110,151 to 111,581
_0114
B158DRAFT_0115: B158DRAFT_0115 - NADH dehydrogenase subunit M (EC 1.6.5.3), at 111,578 to 113,095
_0115
Position (kb)
110
111
112 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 109.225 kb on - strand, within B158DRAFT_0112 at 109.531 kb on + strand at 109.550 kb on + strand at 109.599 kb on - strand at 109.599 kb on - strand at 109.604 kb on - strand at 109.619 kb on - strand at 109.716 kb on + strand at 110.085 kb on - strand at 110.101 kb on - strand at 110.132 kb on + strand at 110.150 kb on - strand at 110.156 kb on - strand at 110.156 kb on - strand at 110.173 kb on + strand at 110.200 kb on - strand at 110.236 kb on - strand at 110.236 kb on - strand at 110.242 kb on + strand at 110.250 kb on - strand at 110.271 kb on - strand at 110.315 kb on + strand, within B158DRAFT_0114 at 110.358 kb on + strand, within B158DRAFT_0114 at 110.363 kb on + strand, within B158DRAFT_0114 at 110.363 kb on + strand, within B158DRAFT_0114 at 110.404 kb on + strand, within B158DRAFT_0114 at 110.404 kb on + strand, within B158DRAFT_0114 at 110.404 kb on + strand, within B158DRAFT_0114 at 110.404 kb on + strand, within B158DRAFT_0114 at 110.498 kb on + strand, within B158DRAFT_0114 at 110.498 kb on + strand, within B158DRAFT_0114 at 110.498 kb on + strand, within B158DRAFT_0114 at 110.506 kb on + strand, within B158DRAFT_0114 at 110.506 kb on + strand, within B158DRAFT_0114 at 110.506 kb on - strand, within B158DRAFT_0114 at 110.514 kb on - strand, within B158DRAFT_0114 at 110.514 kb on - strand, within B158DRAFT_0114 at 110.542 kb on + strand, within B158DRAFT_0114 at 110.550 kb on - strand, within B158DRAFT_0114 at 110.550 kb on - strand, within B158DRAFT_0114 at 110.550 kb on - strand, within B158DRAFT_0114 at 110.565 kb on + strand, within B158DRAFT_0114 at 110.565 kb on + strand, within B158DRAFT_0114 at 110.698 kb on + strand, within B158DRAFT_0114 at 110.704 kb on + strand, within B158DRAFT_0114 at 110.704 kb on + strand, within B158DRAFT_0114 at 110.704 kb on + strand, within B158DRAFT_0114 at 110.709 kb on + strand, within B158DRAFT_0114 at 110.712 kb on - strand, within B158DRAFT_0114 at 110.712 kb on - strand, within B158DRAFT_0114 at 110.712 kb on - strand, within B158DRAFT_0114 at 110.712 kb on - strand, within B158DRAFT_0114 at 110.712 kb on - strand, within B158DRAFT_0114 at 110.785 kb on + strand, within B158DRAFT_0114 at 110.793 kb on - strand, within B158DRAFT_0114 at 110.793 kb on - strand, within B158DRAFT_0114 at 110.793 kb on - strand, within B158DRAFT_0114 at 110.795 kb on + strand, within B158DRAFT_0114 at 110.795 kb on + strand, within B158DRAFT_0114 at 110.795 kb on + strand, within B158DRAFT_0114 at 110.803 kb on - strand, within B158DRAFT_0114 at 110.818 kb on + strand, within B158DRAFT_0114 at 110.926 kb on + strand, within B158DRAFT_0114 at 110.934 kb on - strand, within B158DRAFT_0114 at 110.934 kb on - strand, within B158DRAFT_0114 at 110.961 kb on + strand, within B158DRAFT_0114 at 110.961 kb on + strand, within B158DRAFT_0114 at 110.966 kb on + strand, within B158DRAFT_0114 at 110.978 kb on + strand, within B158DRAFT_0114 at 110.978 kb on + strand, within B158DRAFT_0114 at 110.986 kb on - strand, within B158DRAFT_0114 at 110.990 kb on + strand, within B158DRAFT_0114 at 110.998 kb on - strand, within B158DRAFT_0114 at 111.060 kb on - strand, within B158DRAFT_0114 at 111.072 kb on + strand, within B158DRAFT_0114 at 111.131 kb on + strand, within B158DRAFT_0114 at 111.134 kb on - strand, within B158DRAFT_0114 at 111.134 kb on - strand, within B158DRAFT_0114 at 111.134 kb on - strand, within B158DRAFT_0114 at 111.188 kb on + strand, within B158DRAFT_0114 at 111.202 kb on - strand, within B158DRAFT_0114 at 111.217 kb on + strand, within B158DRAFT_0114 at 111.217 kb on + strand, within B158DRAFT_0114 at 111.217 kb on + strand, within B158DRAFT_0114 at 111.217 kb on + strand, within B158DRAFT_0114 at 111.225 kb on - strand, within B158DRAFT_0114 at 111.225 kb on - strand, within B158DRAFT_0114 at 111.225 kb on - strand, within B158DRAFT_0114 at 111.298 kb on + strand, within B158DRAFT_0114 at 111.306 kb on - strand, within B158DRAFT_0114 at 111.306 kb on - strand, within B158DRAFT_0114 at 111.306 kb on - strand, within B158DRAFT_0114 at 111.338 kb on - strand, within B158DRAFT_0114 at 111.640 kb on + strand at 111.804 kb on - strand, within B158DRAFT_0115 at 111.839 kb on - strand, within B158DRAFT_0115 at 111.980 kb on + strand, within B158DRAFT_0115 at 112.037 kb on + strand, within B158DRAFT_0115 at 112.045 kb on - strand, within B158DRAFT_0115 at 112.045 kb on - strand, within B158DRAFT_0115 at 112.045 kb on - strand, within B158DRAFT_0115 at 112.045 kb on - strand, within B158DRAFT_0115 at 112.055 kb on - strand, within B158DRAFT_0115 at 112.070 kb on + strand, within B158DRAFT_0115 at 112.078 kb on - strand, within B158DRAFT_0115 at 112.078 kb on - strand, within B158DRAFT_0115 at 112.095 kb on + strand, within B158DRAFT_0115 at 112.111 kb on + strand, within B158DRAFT_0115 at 112.155 kb on + strand, within B158DRAFT_0115 at 112.155 kb on + strand, within B158DRAFT_0115 at 112.178 kb on - strand, within B158DRAFT_0115 at 112.212 kb on + strand, within B158DRAFT_0115 at 112.250 kb on + strand, within B158DRAFT_0115 at 112.250 kb on + strand, within B158DRAFT_0115 at 112.263 kb on - strand, within B158DRAFT_0115 at 112.263 kb on - strand, within B158DRAFT_0115 at 112.263 kb on - strand, within B158DRAFT_0115 at 112.354 kb on + strand, within B158DRAFT_0115 at 112.403 kb on + strand, within B158DRAFT_0115 at 112.403 kb on + strand, within B158DRAFT_0115 at 112.403 kb on + strand, within B158DRAFT_0115 at 112.411 kb on - strand, within B158DRAFT_0115 at 112.487 kb on + strand, within B158DRAFT_0115 at 112.536 kb on + strand, within B158DRAFT_0115 at 112.536 kb on + strand, within B158DRAFT_0115 at 112.536 kb on + strand, within B158DRAFT_0115 at 112.536 kb on + strand, within B158DRAFT_0115 at 112.544 kb on - strand, within B158DRAFT_0115
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.021875 mg/ml remove 109,225 - B158DRAFT_0112 0.86 -1.8 109,531 + -0.3 109,550 + -0.6 109,599 - +0.9 109,599 - -0.9 109,604 - +0.1 109,619 - +1.1 109,716 + +0.4 110,085 - -0.1 110,101 - -0.8 110,132 + -0.1 110,150 - -2.6 110,156 - +0.2 110,156 - +0.0 110,173 + +0.7 110,200 - +1.8 110,236 - +1.4 110,236 - +1.4 110,242 + +1.7 110,250 - +0.6 110,271 - +1.1 110,315 + B158DRAFT_0114 0.11 +1.2 110,358 + B158DRAFT_0114 0.14 +1.5 110,363 + B158DRAFT_0114 0.15 +2.2 110,363 + B158DRAFT_0114 0.15 +2.2 110,404 + B158DRAFT_0114 0.18 +0.9 110,404 + B158DRAFT_0114 0.18 +2.4 110,404 + B158DRAFT_0114 0.18 +0.5 110,404 + B158DRAFT_0114 0.18 +2.6 110,498 + B158DRAFT_0114 0.24 +1.3 110,498 + B158DRAFT_0114 0.24 +1.8 110,498 + B158DRAFT_0114 0.24 +1.0 110,506 + B158DRAFT_0114 0.25 +1.5 110,506 + B158DRAFT_0114 0.25 +1.3 110,506 - B158DRAFT_0114 0.25 +1.5 110,514 - B158DRAFT_0114 0.25 +1.5 110,514 - B158DRAFT_0114 0.25 +1.8 110,542 + B158DRAFT_0114 0.27 +1.2 110,550 - B158DRAFT_0114 0.28 +1.7 110,550 - B158DRAFT_0114 0.28 +1.3 110,550 - B158DRAFT_0114 0.28 +0.8 110,565 + B158DRAFT_0114 0.29 +1.6 110,565 + B158DRAFT_0114 0.29 +0.4 110,698 + B158DRAFT_0114 0.38 +2.3 110,704 + B158DRAFT_0114 0.39 +1.8 110,704 + B158DRAFT_0114 0.39 +1.1 110,704 + B158DRAFT_0114 0.39 +2.0 110,709 + B158DRAFT_0114 0.39 +1.9 110,712 - B158DRAFT_0114 0.39 +1.7 110,712 - B158DRAFT_0114 0.39 +2.7 110,712 - B158DRAFT_0114 0.39 +1.7 110,712 - B158DRAFT_0114 0.39 +1.6 110,712 - B158DRAFT_0114 0.39 +1.3 110,785 + B158DRAFT_0114 0.44 +2.1 110,793 - B158DRAFT_0114 0.45 +1.4 110,793 - B158DRAFT_0114 0.45 +2.5 110,793 - B158DRAFT_0114 0.45 +2.1 110,795 + B158DRAFT_0114 0.45 +1.8 110,795 + B158DRAFT_0114 0.45 +2.0 110,795 + B158DRAFT_0114 0.45 +1.7 110,803 - B158DRAFT_0114 0.46 +1.8 110,818 + B158DRAFT_0114 0.47 +1.6 110,926 + B158DRAFT_0114 0.54 +1.4 110,934 - B158DRAFT_0114 0.55 +1.8 110,934 - B158DRAFT_0114 0.55 +1.5 110,961 + B158DRAFT_0114 0.57 +1.4 110,961 + B158DRAFT_0114 0.57 +1.8 110,966 + B158DRAFT_0114 0.57 +1.2 110,978 + B158DRAFT_0114 0.58 +1.4 110,978 + B158DRAFT_0114 0.58 +1.5 110,986 - B158DRAFT_0114 0.58 +1.7 110,990 + B158DRAFT_0114 0.59 +1.8 110,998 - B158DRAFT_0114 0.59 +1.8 111,060 - B158DRAFT_0114 0.64 +0.9 111,072 + B158DRAFT_0114 0.64 +1.8 111,131 + B158DRAFT_0114 0.68 +1.7 111,134 - B158DRAFT_0114 0.69 +1.8 111,134 - B158DRAFT_0114 0.69 +2.7 111,134 - B158DRAFT_0114 0.69 +1.9 111,188 + B158DRAFT_0114 0.72 +1.7 111,202 - B158DRAFT_0114 0.73 +1.4 111,217 + B158DRAFT_0114 0.74 +2.1 111,217 + B158DRAFT_0114 0.74 +2.0 111,217 + B158DRAFT_0114 0.74 +1.7 111,217 + B158DRAFT_0114 0.74 +1.7 111,225 - B158DRAFT_0114 0.75 +1.5 111,225 - B158DRAFT_0114 0.75 +1.4 111,225 - B158DRAFT_0114 0.75 +1.7 111,298 + B158DRAFT_0114 0.80 +1.9 111,306 - B158DRAFT_0114 0.81 +1.6 111,306 - B158DRAFT_0114 0.81 +1.2 111,306 - B158DRAFT_0114 0.81 +1.9 111,338 - B158DRAFT_0114 0.83 +1.0 111,640 + +1.4 111,804 - B158DRAFT_0115 0.15 +1.6 111,839 - B158DRAFT_0115 0.17 +1.1 111,980 + B158DRAFT_0115 0.26 +0.6 112,037 + B158DRAFT_0115 0.30 +1.7 112,045 - B158DRAFT_0115 0.31 +0.5 112,045 - B158DRAFT_0115 0.31 +1.9 112,045 - B158DRAFT_0115 0.31 +1.0 112,045 - B158DRAFT_0115 0.31 +1.2 112,055 - B158DRAFT_0115 0.31 +0.6 112,070 + B158DRAFT_0115 0.32 +1.9 112,078 - B158DRAFT_0115 0.33 +1.3 112,078 - B158DRAFT_0115 0.33 +1.7 112,095 + B158DRAFT_0115 0.34 +1.8 112,111 + B158DRAFT_0115 0.35 +1.3 112,155 + B158DRAFT_0115 0.38 +1.5 112,155 + B158DRAFT_0115 0.38 +1.7 112,178 - B158DRAFT_0115 0.40 +2.1 112,212 + B158DRAFT_0115 0.42 +1.4 112,250 + B158DRAFT_0115 0.44 +1.7 112,250 + B158DRAFT_0115 0.44 +1.6 112,263 - B158DRAFT_0115 0.45 +1.9 112,263 - B158DRAFT_0115 0.45 +1.4 112,263 - B158DRAFT_0115 0.45 +1.4 112,354 + B158DRAFT_0115 0.51 +1.3 112,403 + B158DRAFT_0115 0.54 +2.1 112,403 + B158DRAFT_0115 0.54 +2.1 112,403 + B158DRAFT_0115 0.54 +1.7 112,411 - B158DRAFT_0115 0.55 +1.8 112,487 + B158DRAFT_0115 0.60 +2.4 112,536 + B158DRAFT_0115 0.63 +2.5 112,536 + B158DRAFT_0115 0.63 +1.6 112,536 + B158DRAFT_0115 0.63 +1.9 112,536 + B158DRAFT_0115 0.63 +1.2 112,544 - B158DRAFT_0115 0.64 +1.7
Or see this region's nucleotide sequence