Experiment: m.b. A22 0.04375 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1928 and B158DRAFT_1929 are separated by 30 nucleotides B158DRAFT_1929 and B158DRAFT_1930 are separated by 34 nucleotides B158DRAFT_1930 and B158DRAFT_1931 are separated by 143 nucleotides B158DRAFT_1931 and B158DRAFT_1932 are separated by 3 nucleotides B158DRAFT_1932 and B158DRAFT_1933 are separated by 79 nucleotides
B158DRAFT_1928: B158DRAFT_1928 - Uncharacterized protein conserved in bacteria, at 64,243 to 65,277
_1928
B158DRAFT_1929: B158DRAFT_1929 - transcription elongation factor GreB, at 65,308 to 65,796
_1929
B158DRAFT_1930: B158DRAFT_1930 - hypothetical protein, at 65,831 to 66,043
_1930
B158DRAFT_1931: B158DRAFT_1931 - Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase., at 66,187 to 67,422
_1931
B158DRAFT_1932: B158DRAFT_1932 - Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain, at 67,426 to 68,001
_1932
B158DRAFT_1933: B158DRAFT_1933 - Outer membrane receptor for Fe3+-dicitrate, at 68,081 to 70,303
_1933
Position (kb) 66
67
68 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 65.256 kb on + strand at 65.279 kb on - strand at 65.294 kb on + strand at 65.322 kb on + strand at 65.345 kb on + strand at 65.345 kb on + strand at 65.345 kb on + strand at 65.345 kb on + strand at 65.353 kb on - strand at 65.353 kb on - strand at 65.373 kb on + strand, within B158DRAFT_1929 at 65.381 kb on - strand, within B158DRAFT_1929 at 65.427 kb on - strand, within B158DRAFT_1929 at 65.458 kb on - strand, within B158DRAFT_1929 at 65.474 kb on - strand, within B158DRAFT_1929 at 65.578 kb on + strand, within B158DRAFT_1929 at 65.837 kb on - strand at 66.060 kb on + strand at 66.068 kb on - strand at 66.183 kb on + strand at 66.183 kb on + strand at 66.190 kb on - strand at 66.191 kb on - strand at 66.191 kb on - strand at 66.191 kb on - strand at 66.202 kb on - strand at 66.281 kb on - strand at 66.291 kb on + strand at 66.306 kb on - strand at 66.358 kb on + strand, within B158DRAFT_1931 at 66.370 kb on - strand, within B158DRAFT_1931 at 66.376 kb on - strand, within B158DRAFT_1931 at 66.414 kb on + strand, within B158DRAFT_1931 at 66.511 kb on - strand, within B158DRAFT_1931 at 66.520 kb on + strand, within B158DRAFT_1931 at 66.528 kb on - strand, within B158DRAFT_1931 at 66.600 kb on - strand, within B158DRAFT_1931 at 66.607 kb on - strand, within B158DRAFT_1931 at 66.647 kb on - strand, within B158DRAFT_1931 at 66.649 kb on + strand, within B158DRAFT_1931 at 66.657 kb on - strand, within B158DRAFT_1931 at 66.662 kb on + strand, within B158DRAFT_1931 at 66.680 kb on - strand, within B158DRAFT_1931 at 66.683 kb on - strand, within B158DRAFT_1931 at 66.732 kb on + strand, within B158DRAFT_1931 at 66.732 kb on + strand, within B158DRAFT_1931 at 66.740 kb on - strand, within B158DRAFT_1931 at 66.740 kb on - strand, within B158DRAFT_1931 at 66.740 kb on - strand, within B158DRAFT_1931 at 66.754 kb on + strand, within B158DRAFT_1931 at 66.754 kb on + strand, within B158DRAFT_1931 at 66.825 kb on - strand, within B158DRAFT_1931 at 66.835 kb on + strand, within B158DRAFT_1931 at 66.878 kb on - strand, within B158DRAFT_1931 at 66.911 kb on + strand, within B158DRAFT_1931 at 66.920 kb on + strand, within B158DRAFT_1931 at 66.920 kb on + strand, within B158DRAFT_1931 at 66.920 kb on + strand, within B158DRAFT_1931 at 66.921 kb on + strand, within B158DRAFT_1931 at 66.944 kb on - strand, within B158DRAFT_1931 at 67.006 kb on - strand, within B158DRAFT_1931 at 67.043 kb on + strand, within B158DRAFT_1931 at 67.045 kb on - strand, within B158DRAFT_1931 at 67.228 kb on + strand, within B158DRAFT_1931 at 67.236 kb on - strand, within B158DRAFT_1931 at 67.236 kb on - strand, within B158DRAFT_1931 at 67.284 kb on + strand, within B158DRAFT_1931 at 67.285 kb on + strand, within B158DRAFT_1931 at 67.285 kb on + strand, within B158DRAFT_1931 at 67.285 kb on + strand, within B158DRAFT_1931 at 67.348 kb on + strand at 67.387 kb on + strand at 67.440 kb on + strand at 67.452 kb on + strand at 67.457 kb on + strand at 67.470 kb on - strand at 67.526 kb on + strand, within B158DRAFT_1932 at 67.526 kb on + strand, within B158DRAFT_1932 at 67.526 kb on + strand, within B158DRAFT_1932 at 67.534 kb on - strand, within B158DRAFT_1932 at 67.534 kb on - strand, within B158DRAFT_1932 at 67.536 kb on + strand, within B158DRAFT_1932 at 67.544 kb on + strand, within B158DRAFT_1932 at 67.544 kb on - strand, within B158DRAFT_1932 at 67.544 kb on - strand, within B158DRAFT_1932 at 67.544 kb on - strand, within B158DRAFT_1932 at 67.606 kb on + strand, within B158DRAFT_1932 at 67.614 kb on - strand, within B158DRAFT_1932 at 67.614 kb on - strand, within B158DRAFT_1932 at 67.614 kb on - strand, within B158DRAFT_1932 at 67.625 kb on + strand, within B158DRAFT_1932 at 67.625 kb on + strand, within B158DRAFT_1932 at 67.633 kb on - strand, within B158DRAFT_1932 at 67.635 kb on + strand, within B158DRAFT_1932 at 67.640 kb on + strand, within B158DRAFT_1932 at 67.643 kb on - strand, within B158DRAFT_1932 at 67.688 kb on + strand, within B158DRAFT_1932 at 67.696 kb on - strand, within B158DRAFT_1932 at 67.696 kb on - strand, within B158DRAFT_1932 at 67.696 kb on - strand, within B158DRAFT_1932 at 67.786 kb on + strand, within B158DRAFT_1932 at 67.826 kb on + strand, within B158DRAFT_1932 at 67.870 kb on + strand, within B158DRAFT_1932 at 67.914 kb on + strand, within B158DRAFT_1932 at 67.953 kb on + strand at 67.953 kb on - strand at 67.953 kb on - strand at 67.958 kb on + strand at 67.958 kb on + strand at 68.066 kb on + strand at 68.071 kb on + strand at 68.071 kb on + strand at 68.071 kb on + strand at 68.071 kb on + strand at 68.071 kb on + strand at 68.071 kb on + strand at 68.071 kb on + strand at 68.071 kb on + strand at 68.079 kb on - strand at 68.079 kb on - strand at 68.079 kb on - strand at 68.079 kb on - strand at 68.079 kb on - strand at 68.079 kb on - strand at 68.079 kb on - strand at 68.079 kb on - strand at 68.079 kb on - strand at 68.132 kb on - strand at 68.132 kb on - strand at 68.155 kb on + strand at 68.182 kb on + strand at 68.209 kb on + strand at 68.212 kb on + strand at 68.217 kb on - strand at 68.219 kb on + strand at 68.219 kb on + strand at 68.219 kb on + strand at 68.227 kb on - strand at 68.227 kb on - strand at 68.227 kb on - strand at 68.227 kb on - strand at 68.227 kb on - strand at 68.227 kb on - strand at 68.227 kb on - strand at 68.227 kb on - strand at 68.227 kb on - strand at 68.227 kb on - strand at 68.228 kb on + strand at 68.228 kb on + strand at 68.228 kb on + strand at 68.228 kb on + strand at 68.228 kb on + strand at 68.228 kb on + strand at 68.228 kb on + strand at 68.235 kb on + strand at 68.236 kb on - strand at 68.236 kb on - strand at 68.236 kb on - strand at 68.236 kb on - strand at 68.236 kb on - strand at 68.236 kb on - strand at 68.238 kb on + strand at 68.272 kb on + strand at 68.293 kb on - strand at 68.300 kb on + strand at 68.308 kb on - strand, within B158DRAFT_1933 at 68.310 kb on + strand, within B158DRAFT_1933 at 68.318 kb on - strand, within B158DRAFT_1933 at 68.323 kb on - strand, within B158DRAFT_1933 at 68.340 kb on + strand, within B158DRAFT_1933 at 68.348 kb on - strand, within B158DRAFT_1933 at 68.348 kb on - strand, within B158DRAFT_1933 at 68.373 kb on + strand, within B158DRAFT_1933 at 68.386 kb on - strand, within B158DRAFT_1933 at 68.386 kb on - strand, within B158DRAFT_1933
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.04375 mg/ml remove 65,256 + -0.1 65,279 - -0.0 65,294 + +0.1 65,322 + -0.0 65,345 + +0.1 65,345 + +0.1 65,345 + -0.4 65,345 + +0.2 65,353 - -0.9 65,353 - +0.1 65,373 + B158DRAFT_1929 0.13 +0.0 65,381 - B158DRAFT_1929 0.15 -0.6 65,427 - B158DRAFT_1929 0.24 -0.5 65,458 - B158DRAFT_1929 0.31 -0.0 65,474 - B158DRAFT_1929 0.34 -0.3 65,578 + B158DRAFT_1929 0.55 +0.1 65,837 - -1.0 66,060 + -1.5 66,068 - -0.1 66,183 + -0.1 66,183 + -0.5 66,190 - -2.4 66,191 - -1.3 66,191 - -0.8 66,191 - -3.3 66,202 - -1.4 66,281 - -1.2 66,291 + -2.0 66,306 - -2.2 66,358 + B158DRAFT_1931 0.14 -1.1 66,370 - B158DRAFT_1931 0.15 -1.6 66,376 - B158DRAFT_1931 0.15 -1.1 66,414 + B158DRAFT_1931 0.18 -0.6 66,511 - B158DRAFT_1931 0.26 -2.0 66,520 + B158DRAFT_1931 0.27 -1.1 66,528 - B158DRAFT_1931 0.28 -2.2 66,600 - B158DRAFT_1931 0.33 -1.5 66,607 - B158DRAFT_1931 0.34 -1.4 66,647 - B158DRAFT_1931 0.37 -1.6 66,649 + B158DRAFT_1931 0.37 -1.7 66,657 - B158DRAFT_1931 0.38 -1.6 66,662 + B158DRAFT_1931 0.38 -1.9 66,680 - B158DRAFT_1931 0.40 -2.0 66,683 - B158DRAFT_1931 0.40 -4.4 66,732 + B158DRAFT_1931 0.44 -2.8 66,732 + B158DRAFT_1931 0.44 -0.9 66,740 - B158DRAFT_1931 0.45 -1.8 66,740 - B158DRAFT_1931 0.45 -2.5 66,740 - B158DRAFT_1931 0.45 -1.0 66,754 + B158DRAFT_1931 0.46 -1.6 66,754 + B158DRAFT_1931 0.46 -2.0 66,825 - B158DRAFT_1931 0.52 -1.7 66,835 + B158DRAFT_1931 0.52 -3.1 66,878 - B158DRAFT_1931 0.56 -3.2 66,911 + B158DRAFT_1931 0.59 -2.4 66,920 + B158DRAFT_1931 0.59 -1.9 66,920 + B158DRAFT_1931 0.59 -0.8 66,920 + B158DRAFT_1931 0.59 -1.6 66,921 + B158DRAFT_1931 0.59 -1.8 66,944 - B158DRAFT_1931 0.61 -1.4 67,006 - B158DRAFT_1931 0.66 -1.6 67,043 + B158DRAFT_1931 0.69 -2.2 67,045 - B158DRAFT_1931 0.69 -2.2 67,228 + B158DRAFT_1931 0.84 -1.6 67,236 - B158DRAFT_1931 0.85 -1.6 67,236 - B158DRAFT_1931 0.85 -1.4 67,284 + B158DRAFT_1931 0.89 -1.4 67,285 + B158DRAFT_1931 0.89 +0.0 67,285 + B158DRAFT_1931 0.89 -1.4 67,285 + B158DRAFT_1931 0.89 -1.6 67,348 + -1.1 67,387 + -1.6 67,440 + -0.2 67,452 + -1.7 67,457 + -1.3 67,470 - -1.7 67,526 + B158DRAFT_1932 0.17 -1.8 67,526 + B158DRAFT_1932 0.17 -1.0 67,526 + B158DRAFT_1932 0.17 -0.7 67,534 - B158DRAFT_1932 0.19 -3.0 67,534 - B158DRAFT_1932 0.19 -0.7 67,536 + B158DRAFT_1932 0.19 -2.8 67,544 + B158DRAFT_1932 0.20 -1.9 67,544 - B158DRAFT_1932 0.20 -1.9 67,544 - B158DRAFT_1932 0.20 -2.0 67,544 - B158DRAFT_1932 0.20 -2.2 67,606 + B158DRAFT_1932 0.31 +0.6 67,614 - B158DRAFT_1932 0.33 -2.8 67,614 - B158DRAFT_1932 0.33 -1.8 67,614 - B158DRAFT_1932 0.33 -1.9 67,625 + B158DRAFT_1932 0.35 -2.2 67,625 + B158DRAFT_1932 0.35 -1.4 67,633 - B158DRAFT_1932 0.36 -2.1 67,635 + B158DRAFT_1932 0.36 -1.2 67,640 + B158DRAFT_1932 0.37 -1.5 67,643 - B158DRAFT_1932 0.38 -1.5 67,688 + B158DRAFT_1932 0.45 -3.3 67,696 - B158DRAFT_1932 0.47 -1.7 67,696 - B158DRAFT_1932 0.47 -2.0 67,696 - B158DRAFT_1932 0.47 -1.2 67,786 + B158DRAFT_1932 0.62 -2.6 67,826 + B158DRAFT_1932 0.69 -2.4 67,870 + B158DRAFT_1932 0.77 -3.9 67,914 + B158DRAFT_1932 0.85 -1.4 67,953 + -2.9 67,953 - -1.4 67,953 - -2.1 67,958 + -1.5 67,958 + -2.6 68,066 + +0.0 68,071 + +0.1 68,071 + -0.1 68,071 + -0.0 68,071 + -0.4 68,071 + -0.0 68,071 + +0.0 68,071 + -0.4 68,071 + -0.3 68,079 - -0.2 68,079 - +1.7 68,079 - -0.7 68,079 - -0.3 68,079 - +0.5 68,079 - +0.1 68,079 - -0.3 68,079 - +0.8 68,079 - -0.0 68,132 - -0.3 68,132 - +0.1 68,155 + -0.8 68,182 + +0.1 68,209 + -0.8 68,212 + -0.1 68,217 - -1.0 68,219 + +0.2 68,219 + +0.7 68,219 + +0.4 68,227 - -0.1 68,227 - -0.7 68,227 - +0.1 68,227 - -0.0 68,227 - -0.6 68,227 - -0.3 68,227 - -0.3 68,227 - +0.2 68,227 - -1.0 68,227 - +0.5 68,228 + -0.1 68,228 + +0.3 68,228 + -0.4 68,228 + -0.9 68,228 + -0.9 68,228 + -0.6 68,228 + +0.5 68,235 + -0.1 68,236 - -0.7 68,236 - -2.1 68,236 - -1.3 68,236 - -1.1 68,236 - -2.0 68,236 - -0.8 68,238 + +0.1 68,272 + +0.2 68,293 - -0.7 68,300 + -0.1 68,308 - B158DRAFT_1933 0.10 -0.3 68,310 + B158DRAFT_1933 0.10 -0.2 68,318 - B158DRAFT_1933 0.11 -0.1 68,323 - B158DRAFT_1933 0.11 +0.1 68,340 + B158DRAFT_1933 0.12 +0.1 68,348 - B158DRAFT_1933 0.12 -1.7 68,348 - B158DRAFT_1933 0.12 +0.4 68,373 + B158DRAFT_1933 0.13 -0.4 68,386 - B158DRAFT_1933 0.14 -0.8 68,386 - B158DRAFT_1933 0.14 -1.3
Or see this region's nucleotide sequence