Experiment: m.b. A22 0.04375 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1781 and B158DRAFT_1782 are separated by 295 nucleotides B158DRAFT_1782 and B158DRAFT_1783 are separated by 47 nucleotides B158DRAFT_1783 and B158DRAFT_1784 overlap by 23 nucleotides
B158DRAFT_1781: B158DRAFT_1781 - Acyl-CoA dehydrogenases, at 1,873,889 to 1,876,309
_1781
B158DRAFT_1782: B158DRAFT_1782 - amidohydrolase, at 1,876,605 to 1,877,906
_1782
B158DRAFT_1783: B158DRAFT_1783 - Choline/ethanolamine kinase., at 1,877,954 to 1,878,790
_1783
B158DRAFT_1784: B158DRAFT_1784 - nicotinamide mononucleotide transporter PnuC, at 1,878,768 to 1,879,379
_1784
Position (kb)
1876
1877
1878 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1875.654 kb on + strand, within B158DRAFT_1781 at 1875.662 kb on - strand, within B158DRAFT_1781 at 1875.770 kb on - strand, within B158DRAFT_1781 at 1875.787 kb on + strand, within B158DRAFT_1781 at 1875.788 kb on + strand, within B158DRAFT_1781 at 1875.788 kb on + strand, within B158DRAFT_1781 at 1875.795 kb on - strand, within B158DRAFT_1781 at 1875.803 kb on + strand, within B158DRAFT_1781 at 1875.806 kb on - strand, within B158DRAFT_1781 at 1875.911 kb on + strand, within B158DRAFT_1781 at 1875.911 kb on + strand, within B158DRAFT_1781 at 1875.911 kb on + strand, within B158DRAFT_1781 at 1875.911 kb on + strand, within B158DRAFT_1781 at 1875.918 kb on + strand, within B158DRAFT_1781 at 1875.919 kb on - strand, within B158DRAFT_1781 at 1875.919 kb on - strand, within B158DRAFT_1781 at 1875.919 kb on - strand, within B158DRAFT_1781 at 1875.919 kb on - strand, within B158DRAFT_1781 at 1875.919 kb on - strand, within B158DRAFT_1781 at 1875.919 kb on - strand, within B158DRAFT_1781 at 1875.919 kb on - strand, within B158DRAFT_1781 at 1875.926 kb on - strand, within B158DRAFT_1781 at 1875.926 kb on - strand, within B158DRAFT_1781 at 1875.926 kb on - strand, within B158DRAFT_1781 at 1875.926 kb on - strand, within B158DRAFT_1781 at 1875.937 kb on + strand, within B158DRAFT_1781 at 1875.945 kb on - strand, within B158DRAFT_1781 at 1875.945 kb on - strand, within B158DRAFT_1781 at 1876.019 kb on + strand, within B158DRAFT_1781 at 1876.036 kb on + strand, within B158DRAFT_1781 at 1876.036 kb on + strand, within B158DRAFT_1781 at 1876.036 kb on + strand, within B158DRAFT_1781 at 1876.036 kb on + strand, within B158DRAFT_1781 at 1876.036 kb on + strand, within B158DRAFT_1781 at 1876.036 kb on + strand, within B158DRAFT_1781 at 1876.036 kb on + strand, within B158DRAFT_1781 at 1876.036 kb on + strand, within B158DRAFT_1781 at 1876.036 kb on + strand, within B158DRAFT_1781 at 1876.036 kb on + strand, within B158DRAFT_1781 at 1876.042 kb on - strand, within B158DRAFT_1781 at 1876.044 kb on - strand, within B158DRAFT_1781 at 1876.044 kb on - strand, within B158DRAFT_1781 at 1876.044 kb on - strand, within B158DRAFT_1781 at 1876.044 kb on - strand, within B158DRAFT_1781 at 1876.044 kb on - strand, within B158DRAFT_1781 at 1876.044 kb on - strand, within B158DRAFT_1781 at 1876.044 kb on - strand, within B158DRAFT_1781 at 1876.044 kb on - strand, within B158DRAFT_1781 at 1876.044 kb on - strand, within B158DRAFT_1781 at 1876.044 kb on - strand, within B158DRAFT_1781 at 1876.044 kb on - strand, within B158DRAFT_1781 at 1876.044 kb on - strand, within B158DRAFT_1781 at 1876.044 kb on - strand, within B158DRAFT_1781 at 1876.044 kb on - strand, within B158DRAFT_1781 at 1876.104 kb on - strand at 1876.126 kb on + strand at 1876.141 kb on - strand at 1876.313 kb on + strand at 1876.349 kb on - strand at 1876.394 kb on + strand at 1876.399 kb on + strand at 1876.402 kb on - strand at 1876.402 kb on - strand at 1876.402 kb on - strand at 1876.438 kb on + strand at 1876.457 kb on + strand at 1876.466 kb on - strand at 1876.468 kb on - strand at 1876.494 kb on - strand at 1876.500 kb on + strand at 1876.500 kb on + strand at 1876.503 kb on - strand at 1876.506 kb on - strand at 1876.511 kb on - strand at 1876.511 kb on - strand at 1876.513 kb on - strand at 1876.571 kb on - strand at 1876.696 kb on - strand at 1876.723 kb on + strand at 1876.741 kb on + strand, within B158DRAFT_1782 at 1876.853 kb on + strand, within B158DRAFT_1782 at 1876.853 kb on + strand, within B158DRAFT_1782 at 1876.860 kb on + strand, within B158DRAFT_1782 at 1876.861 kb on - strand, within B158DRAFT_1782 at 1876.861 kb on - strand, within B158DRAFT_1782 at 1876.861 kb on - strand, within B158DRAFT_1782 at 1876.861 kb on - strand, within B158DRAFT_1782 at 1876.861 kb on - strand, within B158DRAFT_1782 at 1876.861 kb on - strand, within B158DRAFT_1782 at 1876.861 kb on - strand, within B158DRAFT_1782 at 1876.876 kb on - strand, within B158DRAFT_1782 at 1876.904 kb on - strand, within B158DRAFT_1782 at 1876.923 kb on + strand, within B158DRAFT_1782 at 1876.943 kb on - strand, within B158DRAFT_1782 at 1876.993 kb on + strand, within B158DRAFT_1782 at 1877.009 kb on - strand, within B158DRAFT_1782 at 1877.105 kb on - strand, within B158DRAFT_1782 at 1877.115 kb on - strand, within B158DRAFT_1782 at 1877.139 kb on - strand, within B158DRAFT_1782 at 1877.167 kb on + strand, within B158DRAFT_1782 at 1877.175 kb on - strand, within B158DRAFT_1782 at 1877.206 kb on - strand, within B158DRAFT_1782 at 1877.217 kb on - strand, within B158DRAFT_1782 at 1877.217 kb on - strand, within B158DRAFT_1782 at 1877.217 kb on - strand, within B158DRAFT_1782 at 1877.217 kb on - strand, within B158DRAFT_1782 at 1877.220 kb on + strand, within B158DRAFT_1782 at 1877.245 kb on + strand, within B158DRAFT_1782 at 1877.245 kb on - strand, within B158DRAFT_1782 at 1877.252 kb on + strand, within B158DRAFT_1782 at 1877.257 kb on + strand, within B158DRAFT_1782 at 1877.292 kb on + strand, within B158DRAFT_1782 at 1877.300 kb on - strand, within B158DRAFT_1782 at 1877.302 kb on + strand, within B158DRAFT_1782 at 1877.302 kb on + strand, within B158DRAFT_1782 at 1877.302 kb on + strand, within B158DRAFT_1782 at 1877.302 kb on + strand, within B158DRAFT_1782 at 1877.302 kb on + strand, within B158DRAFT_1782 at 1877.302 kb on + strand, within B158DRAFT_1782 at 1877.308 kb on - strand, within B158DRAFT_1782 at 1877.310 kb on - strand, within B158DRAFT_1782 at 1877.310 kb on - strand, within B158DRAFT_1782 at 1877.310 kb on - strand, within B158DRAFT_1782 at 1877.331 kb on + strand, within B158DRAFT_1782 at 1877.339 kb on - strand, within B158DRAFT_1782 at 1877.404 kb on + strand, within B158DRAFT_1782 at 1877.411 kb on + strand, within B158DRAFT_1782 at 1877.411 kb on + strand, within B158DRAFT_1782 at 1877.558 kb on + strand, within B158DRAFT_1782 at 1877.558 kb on + strand, within B158DRAFT_1782 at 1877.558 kb on + strand, within B158DRAFT_1782 at 1877.588 kb on + strand, within B158DRAFT_1782 at 1877.645 kb on - strand, within B158DRAFT_1782 at 1877.853 kb on + strand at 1877.978 kb on - strand at 1877.982 kb on + strand at 1878.056 kb on - strand, within B158DRAFT_1783 at 1878.065 kb on - strand, within B158DRAFT_1783 at 1878.234 kb on - strand, within B158DRAFT_1783 at 1878.286 kb on - strand, within B158DRAFT_1783 at 1878.389 kb on - strand, within B158DRAFT_1783 at 1878.395 kb on + strand, within B158DRAFT_1783 at 1878.454 kb on - strand, within B158DRAFT_1783 at 1878.530 kb on + strand, within B158DRAFT_1783 at 1878.551 kb on + strand, within B158DRAFT_1783 at 1878.551 kb on + strand, within B158DRAFT_1783 at 1878.559 kb on - strand, within B158DRAFT_1783 at 1878.576 kb on + strand, within B158DRAFT_1783 at 1878.576 kb on + strand, within B158DRAFT_1783 at 1878.576 kb on + strand, within B158DRAFT_1783 at 1878.576 kb on + strand, within B158DRAFT_1783 at 1878.584 kb on - strand, within B158DRAFT_1783 at 1878.606 kb on - strand, within B158DRAFT_1783 at 1878.608 kb on + strand, within B158DRAFT_1783 at 1878.645 kb on + strand, within B158DRAFT_1783 at 1878.645 kb on + strand, within B158DRAFT_1783 at 1878.655 kb on + strand, within B158DRAFT_1783 at 1878.663 kb on - strand, within B158DRAFT_1783 at 1878.679 kb on + strand, within B158DRAFT_1783 at 1878.687 kb on - strand, within B158DRAFT_1783 at 1878.775 kb on + strand at 1878.775 kb on + strand at 1878.783 kb on - strand at 1878.787 kb on + strand at 1878.790 kb on - strand at 1878.795 kb on - strand at 1878.795 kb on - strand at 1878.803 kb on + strand at 1878.822 kb on + strand at 1878.830 kb on - strand, within B158DRAFT_1784 at 1878.830 kb on - strand, within B158DRAFT_1784
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.04375 mg/ml remove 1,875,654 + B158DRAFT_1781 0.73 +0.1 1,875,662 - B158DRAFT_1781 0.73 +0.1 1,875,770 - B158DRAFT_1781 0.78 +0.8 1,875,787 + B158DRAFT_1781 0.78 -0.4 1,875,788 + B158DRAFT_1781 0.78 -0.7 1,875,788 + B158DRAFT_1781 0.78 -0.3 1,875,795 - B158DRAFT_1781 0.79 -1.1 1,875,803 + B158DRAFT_1781 0.79 -1.4 1,875,806 - B158DRAFT_1781 0.79 -0.2 1,875,911 + B158DRAFT_1781 0.84 -0.3 1,875,911 + B158DRAFT_1781 0.84 +0.0 1,875,911 + B158DRAFT_1781 0.84 -0.2 1,875,911 + B158DRAFT_1781 0.84 -0.2 1,875,918 + B158DRAFT_1781 0.84 -0.1 1,875,919 - B158DRAFT_1781 0.84 -0.2 1,875,919 - B158DRAFT_1781 0.84 -0.6 1,875,919 - B158DRAFT_1781 0.84 -0.1 1,875,919 - B158DRAFT_1781 0.84 -0.4 1,875,919 - B158DRAFT_1781 0.84 +0.1 1,875,919 - B158DRAFT_1781 0.84 +0.6 1,875,919 - B158DRAFT_1781 0.84 +0.0 1,875,926 - B158DRAFT_1781 0.84 +0.1 1,875,926 - B158DRAFT_1781 0.84 -0.0 1,875,926 - B158DRAFT_1781 0.84 +0.2 1,875,926 - B158DRAFT_1781 0.84 +0.3 1,875,937 + B158DRAFT_1781 0.85 -0.2 1,875,945 - B158DRAFT_1781 0.85 +0.1 1,875,945 - B158DRAFT_1781 0.85 +1.8 1,876,019 + B158DRAFT_1781 0.88 -0.4 1,876,036 + B158DRAFT_1781 0.89 +0.1 1,876,036 + B158DRAFT_1781 0.89 -0.1 1,876,036 + B158DRAFT_1781 0.89 -0.1 1,876,036 + B158DRAFT_1781 0.89 -0.1 1,876,036 + B158DRAFT_1781 0.89 +0.1 1,876,036 + B158DRAFT_1781 0.89 +0.3 1,876,036 + B158DRAFT_1781 0.89 -0.7 1,876,036 + B158DRAFT_1781 0.89 -0.1 1,876,036 + B158DRAFT_1781 0.89 +0.3 1,876,036 + B158DRAFT_1781 0.89 +1.2 1,876,042 - B158DRAFT_1781 0.89 -1.2 1,876,044 - B158DRAFT_1781 0.89 -0.2 1,876,044 - B158DRAFT_1781 0.89 +0.3 1,876,044 - B158DRAFT_1781 0.89 -0.1 1,876,044 - B158DRAFT_1781 0.89 -0.8 1,876,044 - B158DRAFT_1781 0.89 +0.0 1,876,044 - B158DRAFT_1781 0.89 -0.9 1,876,044 - B158DRAFT_1781 0.89 -0.7 1,876,044 - B158DRAFT_1781 0.89 -0.3 1,876,044 - B158DRAFT_1781 0.89 +0.4 1,876,044 - B158DRAFT_1781 0.89 +0.1 1,876,044 - B158DRAFT_1781 0.89 +1.1 1,876,044 - B158DRAFT_1781 0.89 -0.9 1,876,044 - B158DRAFT_1781 0.89 +0.2 1,876,044 - B158DRAFT_1781 0.89 +0.3 1,876,104 - +0.0 1,876,126 + -0.8 1,876,141 - +0.3 1,876,313 + +0.5 1,876,349 - +0.0 1,876,394 + +0.3 1,876,399 + +0.3 1,876,402 - +0.2 1,876,402 - -0.3 1,876,402 - -0.5 1,876,438 + +0.1 1,876,457 + +0.1 1,876,466 - +0.2 1,876,468 - -0.4 1,876,494 - +0.2 1,876,500 + -0.0 1,876,500 + -0.7 1,876,503 - -0.1 1,876,506 - +0.3 1,876,511 - -0.5 1,876,511 - -0.6 1,876,513 - +0.1 1,876,571 - -0.9 1,876,696 - -0.1 1,876,723 + +0.4 1,876,741 + B158DRAFT_1782 0.10 -0.1 1,876,853 + B158DRAFT_1782 0.19 +0.5 1,876,853 + B158DRAFT_1782 0.19 +0.2 1,876,860 + B158DRAFT_1782 0.20 -0.1 1,876,861 - B158DRAFT_1782 0.20 -0.4 1,876,861 - B158DRAFT_1782 0.20 -0.1 1,876,861 - B158DRAFT_1782 0.20 -0.2 1,876,861 - B158DRAFT_1782 0.20 +0.2 1,876,861 - B158DRAFT_1782 0.20 -0.9 1,876,861 - B158DRAFT_1782 0.20 -0.1 1,876,861 - B158DRAFT_1782 0.20 +0.4 1,876,876 - B158DRAFT_1782 0.21 +0.5 1,876,904 - B158DRAFT_1782 0.23 -0.2 1,876,923 + B158DRAFT_1782 0.24 -0.2 1,876,943 - B158DRAFT_1782 0.26 -0.4 1,876,993 + B158DRAFT_1782 0.30 -0.1 1,877,009 - B158DRAFT_1782 0.31 -0.4 1,877,105 - B158DRAFT_1782 0.38 -0.2 1,877,115 - B158DRAFT_1782 0.39 +0.3 1,877,139 - B158DRAFT_1782 0.41 -0.6 1,877,167 + B158DRAFT_1782 0.43 -0.3 1,877,175 - B158DRAFT_1782 0.44 -0.2 1,877,206 - B158DRAFT_1782 0.46 +0.3 1,877,217 - B158DRAFT_1782 0.47 +0.0 1,877,217 - B158DRAFT_1782 0.47 +0.7 1,877,217 - B158DRAFT_1782 0.47 +0.1 1,877,217 - B158DRAFT_1782 0.47 -0.1 1,877,220 + B158DRAFT_1782 0.47 -0.4 1,877,245 + B158DRAFT_1782 0.49 -0.4 1,877,245 - B158DRAFT_1782 0.49 +0.1 1,877,252 + B158DRAFT_1782 0.50 +0.2 1,877,257 + B158DRAFT_1782 0.50 -0.1 1,877,292 + B158DRAFT_1782 0.53 -0.1 1,877,300 - B158DRAFT_1782 0.53 +0.6 1,877,302 + B158DRAFT_1782 0.54 -0.3 1,877,302 + B158DRAFT_1782 0.54 -0.3 1,877,302 + B158DRAFT_1782 0.54 +0.3 1,877,302 + B158DRAFT_1782 0.54 -0.4 1,877,302 + B158DRAFT_1782 0.54 -1.2 1,877,302 + B158DRAFT_1782 0.54 -1.5 1,877,308 - B158DRAFT_1782 0.54 -0.1 1,877,310 - B158DRAFT_1782 0.54 -0.3 1,877,310 - B158DRAFT_1782 0.54 +0.3 1,877,310 - B158DRAFT_1782 0.54 -0.4 1,877,331 + B158DRAFT_1782 0.56 +0.5 1,877,339 - B158DRAFT_1782 0.56 -0.1 1,877,404 + B158DRAFT_1782 0.61 -0.5 1,877,411 + B158DRAFT_1782 0.62 -0.2 1,877,411 + B158DRAFT_1782 0.62 +0.0 1,877,558 + B158DRAFT_1782 0.73 -0.0 1,877,558 + B158DRAFT_1782 0.73 -0.0 1,877,558 + B158DRAFT_1782 0.73 -0.2 1,877,588 + B158DRAFT_1782 0.75 -0.1 1,877,645 - B158DRAFT_1782 0.80 +0.2 1,877,853 + +0.2 1,877,978 - -0.3 1,877,982 + -0.6 1,878,056 - B158DRAFT_1783 0.12 -2.6 1,878,065 - B158DRAFT_1783 0.13 +0.4 1,878,234 - B158DRAFT_1783 0.33 -0.4 1,878,286 - B158DRAFT_1783 0.40 -0.6 1,878,389 - B158DRAFT_1783 0.52 -0.7 1,878,395 + B158DRAFT_1783 0.53 -0.1 1,878,454 - B158DRAFT_1783 0.60 +0.1 1,878,530 + B158DRAFT_1783 0.69 -0.5 1,878,551 + B158DRAFT_1783 0.71 -0.2 1,878,551 + B158DRAFT_1783 0.71 +0.6 1,878,559 - B158DRAFT_1783 0.72 -2.7 1,878,576 + B158DRAFT_1783 0.74 -0.0 1,878,576 + B158DRAFT_1783 0.74 +0.1 1,878,576 + B158DRAFT_1783 0.74 -0.2 1,878,576 + B158DRAFT_1783 0.74 +0.0 1,878,584 - B158DRAFT_1783 0.75 +0.3 1,878,606 - B158DRAFT_1783 0.78 -0.5 1,878,608 + B158DRAFT_1783 0.78 -0.2 1,878,645 + B158DRAFT_1783 0.83 +0.6 1,878,645 + B158DRAFT_1783 0.83 -1.7 1,878,655 + B158DRAFT_1783 0.84 -0.2 1,878,663 - B158DRAFT_1783 0.85 -0.1 1,878,679 + B158DRAFT_1783 0.87 -1.3 1,878,687 - B158DRAFT_1783 0.88 +0.1 1,878,775 + -1.6 1,878,775 + -0.8 1,878,783 - +0.0 1,878,787 + -0.0 1,878,790 - +0.2 1,878,795 - -0.3 1,878,795 - -0.4 1,878,803 + -0.3 1,878,822 + -0.2 1,878,830 - B158DRAFT_1784 0.10 -0.1 1,878,830 - B158DRAFT_1784 0.10 -0.5
Or see this region's nucleotide sequence