Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1562

Experiment: m.b. A22 0.04375 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1561 and B158DRAFT_1562 are separated by 50 nucleotidesB158DRAFT_1562 and B158DRAFT_1563 are separated by 105 nucleotides B158DRAFT_1561: B158DRAFT_1561 - Signal transduction histidine kinase, at 1,615,637 to 1,616,998 _1561 B158DRAFT_1562: B158DRAFT_1562 - hypothetical protein, at 1,617,049 to 1,617,771 _1562 B158DRAFT_1563: B158DRAFT_1563 - Nucleotidyltransferase/DNA polymerase involved in DNA repair, at 1,617,877 to 1,618,986 _1563 Position (kb) 1617 1618Strain fitness (log2 ratio) -2 -1 0 1at 1616.079 kb on + strand, within B158DRAFT_1561at 1616.162 kb on + strand, within B158DRAFT_1561at 1616.170 kb on - strand, within B158DRAFT_1561at 1616.188 kb on - strand, within B158DRAFT_1561at 1616.216 kb on + strand, within B158DRAFT_1561at 1616.224 kb on - strand, within B158DRAFT_1561at 1616.260 kb on + strand, within B158DRAFT_1561at 1616.268 kb on - strand, within B158DRAFT_1561at 1616.268 kb on - strand, within B158DRAFT_1561at 1616.268 kb on - strand, within B158DRAFT_1561at 1616.268 kb on - strand, within B158DRAFT_1561at 1616.276 kb on - strand, within B158DRAFT_1561at 1616.287 kb on - strand, within B158DRAFT_1561at 1616.365 kb on + strand, within B158DRAFT_1561at 1616.373 kb on - strand, within B158DRAFT_1561at 1616.497 kb on + strand, within B158DRAFT_1561at 1616.555 kb on - strand, within B158DRAFT_1561at 1616.602 kb on + strand, within B158DRAFT_1561at 1616.602 kb on + strand, within B158DRAFT_1561at 1616.602 kb on + strand, within B158DRAFT_1561at 1616.602 kb on + strand, within B158DRAFT_1561at 1616.602 kb on + strand, within B158DRAFT_1561at 1616.602 kb on + strand, within B158DRAFT_1561at 1616.602 kb on + strand, within B158DRAFT_1561at 1616.602 kb on + strand, within B158DRAFT_1561at 1616.602 kb on + strand, within B158DRAFT_1561at 1616.610 kb on - strand, within B158DRAFT_1561at 1616.610 kb on - strand, within B158DRAFT_1561at 1616.610 kb on - strand, within B158DRAFT_1561at 1616.610 kb on - strand, within B158DRAFT_1561at 1616.620 kb on + strand, within B158DRAFT_1561at 1616.689 kb on + strand, within B158DRAFT_1561at 1616.696 kb on - strand, within B158DRAFT_1561at 1616.722 kb on - strand, within B158DRAFT_1561at 1616.776 kb on - strand, within B158DRAFT_1561at 1616.823 kb on - strand, within B158DRAFT_1561at 1616.889 kb on + strandat 1616.890 kb on - strandat 1616.959 kb on + strandat 1616.959 kb on + strandat 1616.969 kb on + strandat 1616.969 kb on + strandat 1616.977 kb on - strandat 1617.006 kb on + strandat 1617.006 kb on + strandat 1617.006 kb on + strandat 1617.014 kb on - strandat 1617.014 kb on - strandat 1617.014 kb on - strandat 1617.018 kb on + strandat 1617.026 kb on - strandat 1617.178 kb on + strand, within B158DRAFT_1562at 1617.179 kb on + strand, within B158DRAFT_1562at 1617.194 kb on - strand, within B158DRAFT_1562at 1617.274 kb on - strand, within B158DRAFT_1562at 1617.323 kb on + strand, within B158DRAFT_1562at 1617.373 kb on - strand, within B158DRAFT_1562at 1617.422 kb on + strand, within B158DRAFT_1562at 1617.440 kb on + strand, within B158DRAFT_1562at 1617.556 kb on - strand, within B158DRAFT_1562at 1617.613 kb on - strand, within B158DRAFT_1562at 1617.633 kb on + strand, within B158DRAFT_1562at 1617.633 kb on + strand, within B158DRAFT_1562at 1617.641 kb on - strand, within B158DRAFT_1562at 1617.641 kb on - strand, within B158DRAFT_1562at 1617.651 kb on - strand, within B158DRAFT_1562at 1617.664 kb on + strand, within B158DRAFT_1562at 1617.677 kb on + strand, within B158DRAFT_1562at 1617.873 kb on + strandat 1617.881 kb on - strandat 1618.005 kb on - strand, within B158DRAFT_1563at 1618.020 kb on - strand, within B158DRAFT_1563at 1618.078 kb on + strand, within B158DRAFT_1563at 1618.078 kb on + strand, within B158DRAFT_1563at 1618.085 kb on - strand, within B158DRAFT_1563at 1618.098 kb on + strand, within B158DRAFT_1563at 1618.103 kb on + strand, within B158DRAFT_1563at 1618.103 kb on + strand, within B158DRAFT_1563at 1618.113 kb on + strand, within B158DRAFT_1563at 1618.113 kb on + strand, within B158DRAFT_1563at 1618.113 kb on + strand, within B158DRAFT_1563at 1618.113 kb on + strand, within B158DRAFT_1563at 1618.113 kb on + strand, within B158DRAFT_1563at 1618.121 kb on - strand, within B158DRAFT_1563at 1618.121 kb on - strand, within B158DRAFT_1563at 1618.121 kb on - strand, within B158DRAFT_1563at 1618.121 kb on - strand, within B158DRAFT_1563at 1618.122 kb on - strand, within B158DRAFT_1563at 1618.213 kb on + strand, within B158DRAFT_1563at 1618.213 kb on + strand, within B158DRAFT_1563at 1618.223 kb on + strand, within B158DRAFT_1563at 1618.223 kb on + strand, within B158DRAFT_1563at 1618.223 kb on + strand, within B158DRAFT_1563at 1618.231 kb on - strand, within B158DRAFT_1563at 1618.278 kb on + strand, within B158DRAFT_1563at 1618.278 kb on + strand, within B158DRAFT_1563at 1618.278 kb on + strand, within B158DRAFT_1563at 1618.278 kb on + strand, within B158DRAFT_1563at 1618.278 kb on + strand, within B158DRAFT_1563at 1618.278 kb on + strand, within B158DRAFT_1563at 1618.278 kb on + strand, within B158DRAFT_1563at 1618.278 kb on + strand, within B158DRAFT_1563at 1618.278 kb on + strand, within B158DRAFT_1563at 1618.278 kb on + strand, within B158DRAFT_1563at 1618.278 kb on + strand, within B158DRAFT_1563at 1618.286 kb on - strand, within B158DRAFT_1563at 1618.286 kb on - strand, within B158DRAFT_1563at 1618.286 kb on - strand, within B158DRAFT_1563at 1618.286 kb on - strand, within B158DRAFT_1563at 1618.286 kb on - strand, within B158DRAFT_1563at 1618.286 kb on - strand, within B158DRAFT_1563at 1618.286 kb on - strand, within B158DRAFT_1563at 1618.286 kb on - strand, within B158DRAFT_1563at 1618.286 kb on - strand, within B158DRAFT_1563at 1618.326 kb on - strand, within B158DRAFT_1563at 1618.336 kb on - strand, within B158DRAFT_1563at 1618.336 kb on - strand, within B158DRAFT_1563at 1618.378 kb on - strand, within B158DRAFT_1563at 1618.421 kb on + strand, within B158DRAFT_1563at 1618.503 kb on + strand, within B158DRAFT_1563at 1618.511 kb on - strand, within B158DRAFT_1563at 1618.520 kb on + strand, within B158DRAFT_1563at 1618.528 kb on - strand, within B158DRAFT_1563at 1618.537 kb on - strand, within B158DRAFT_1563at 1618.539 kb on + strand, within B158DRAFT_1563at 1618.629 kb on + strand, within B158DRAFT_1563at 1618.672 kb on + strand, within B158DRAFT_1563at 1618.672 kb on + strand, within B158DRAFT_1563at 1618.672 kb on + strand, within B158DRAFT_1563at 1618.672 kb on + strand, within B158DRAFT_1563at 1618.678 kb on - strand, within B158DRAFT_1563at 1618.678 kb on - strand, within B158DRAFT_1563at 1618.678 kb on - strand, within B158DRAFT_1563at 1618.678 kb on - strand, within B158DRAFT_1563at 1618.678 kb on - strand, within B158DRAFT_1563at 1618.678 kb on - strand, within B158DRAFT_1563at 1618.680 kb on + strand, within B158DRAFT_1563at 1618.680 kb on - strand, within B158DRAFT_1563at 1618.680 kb on - strand, within B158DRAFT_1563at 1618.680 kb on - strand, within B158DRAFT_1563at 1618.680 kb on - strand, within B158DRAFT_1563at 1618.682 kb on + strand, within B158DRAFT_1563at 1618.682 kb on + strand, within B158DRAFT_1563at 1618.690 kb on - strand, within B158DRAFT_1563at 1618.690 kb on - strand, within B158DRAFT_1563at 1618.690 kb on - strand, within B158DRAFT_1563at 1618.712 kb on + strand, within B158DRAFT_1563at 1618.712 kb on + strand, within B158DRAFT_1563at 1618.712 kb on + strand, within B158DRAFT_1563at 1618.712 kb on + strand, within B158DRAFT_1563at 1618.741 kb on - strand, within B158DRAFT_1563

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. A22 0.04375 mg/ml
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1,616,079 + B158DRAFT_1561 0.32 -0.1
1,616,162 + B158DRAFT_1561 0.39 +0.4
1,616,170 - B158DRAFT_1561 0.39 -0.2
1,616,188 - B158DRAFT_1561 0.40 -0.5
1,616,216 + B158DRAFT_1561 0.43 -0.2
1,616,224 - B158DRAFT_1561 0.43 -0.1
1,616,260 + B158DRAFT_1561 0.46 -0.3
1,616,268 - B158DRAFT_1561 0.46 +0.0
1,616,268 - B158DRAFT_1561 0.46 -0.4
1,616,268 - B158DRAFT_1561 0.46 -0.3
1,616,268 - B158DRAFT_1561 0.46 -0.4
1,616,276 - B158DRAFT_1561 0.47 -0.3
1,616,287 - B158DRAFT_1561 0.48 +0.0
1,616,365 + B158DRAFT_1561 0.53 -0.0
1,616,373 - B158DRAFT_1561 0.54 -1.2
1,616,497 + B158DRAFT_1561 0.63 -0.7
1,616,555 - B158DRAFT_1561 0.67 +0.2
1,616,602 + B158DRAFT_1561 0.71 -0.5
1,616,602 + B158DRAFT_1561 0.71 -0.0
1,616,602 + B158DRAFT_1561 0.71 -0.1
1,616,602 + B158DRAFT_1561 0.71 +0.1
1,616,602 + B158DRAFT_1561 0.71 -0.1
1,616,602 + B158DRAFT_1561 0.71 -1.3
1,616,602 + B158DRAFT_1561 0.71 -1.8
1,616,602 + B158DRAFT_1561 0.71 -0.0
1,616,602 + B158DRAFT_1561 0.71 -0.3
1,616,610 - B158DRAFT_1561 0.71 -0.1
1,616,610 - B158DRAFT_1561 0.71 -0.3
1,616,610 - B158DRAFT_1561 0.71 +0.7
1,616,610 - B158DRAFT_1561 0.71 +0.0
1,616,620 + B158DRAFT_1561 0.72 -0.2
1,616,689 + B158DRAFT_1561 0.77 -0.1
1,616,696 - B158DRAFT_1561 0.78 -0.2
1,616,722 - B158DRAFT_1561 0.80 +0.6
1,616,776 - B158DRAFT_1561 0.84 -0.5
1,616,823 - B158DRAFT_1561 0.87 -0.4
1,616,889 + +0.2
1,616,890 - -0.2
1,616,959 + -0.7
1,616,959 + -0.5
1,616,969 + -0.1
1,616,969 + +0.0
1,616,977 - -0.7
1,617,006 + -0.8
1,617,006 + -0.3
1,617,006 + -1.5
1,617,014 - -0.2
1,617,014 - +0.2
1,617,014 - +0.1
1,617,018 + +0.2
1,617,026 - +0.0
1,617,178 + B158DRAFT_1562 0.18 +0.1
1,617,179 + B158DRAFT_1562 0.18 -0.4
1,617,194 - B158DRAFT_1562 0.20 -0.5
1,617,274 - B158DRAFT_1562 0.31 +1.5
1,617,323 + B158DRAFT_1562 0.38 -0.3
1,617,373 - B158DRAFT_1562 0.45 -0.0
1,617,422 + B158DRAFT_1562 0.52 -0.3
1,617,440 + B158DRAFT_1562 0.54 +0.5
1,617,556 - B158DRAFT_1562 0.70 -0.2
1,617,613 - B158DRAFT_1562 0.78 -0.3
1,617,633 + B158DRAFT_1562 0.81 -0.0
1,617,633 + B158DRAFT_1562 0.81 -0.1
1,617,641 - B158DRAFT_1562 0.82 +0.4
1,617,641 - B158DRAFT_1562 0.82 +0.7
1,617,651 - B158DRAFT_1562 0.83 +0.2
1,617,664 + B158DRAFT_1562 0.85 -1.1
1,617,677 + B158DRAFT_1562 0.87 -1.3
1,617,873 + +0.1
1,617,881 - -0.1
1,618,005 - B158DRAFT_1563 0.12 -0.3
1,618,020 - B158DRAFT_1563 0.13 -0.4
1,618,078 + B158DRAFT_1563 0.18 -0.1
1,618,078 + B158DRAFT_1563 0.18 -0.3
1,618,085 - B158DRAFT_1563 0.19 -0.9
1,618,098 + B158DRAFT_1563 0.20 -0.4
1,618,103 + B158DRAFT_1563 0.20 +0.2
1,618,103 + B158DRAFT_1563 0.20 +0.2
1,618,113 + B158DRAFT_1563 0.21 -0.1
1,618,113 + B158DRAFT_1563 0.21 +0.1
1,618,113 + B158DRAFT_1563 0.21 +0.1
1,618,113 + B158DRAFT_1563 0.21 +0.2
1,618,113 + B158DRAFT_1563 0.21 -1.2
1,618,121 - B158DRAFT_1563 0.22 +0.8
1,618,121 - B158DRAFT_1563 0.22 +0.0
1,618,121 - B158DRAFT_1563 0.22 -0.6
1,618,121 - B158DRAFT_1563 0.22 -0.1
1,618,122 - B158DRAFT_1563 0.22 -0.0
1,618,213 + B158DRAFT_1563 0.30 -0.1
1,618,213 + B158DRAFT_1563 0.30 -0.2
1,618,223 + B158DRAFT_1563 0.31 +0.0
1,618,223 + B158DRAFT_1563 0.31 +0.1
1,618,223 + B158DRAFT_1563 0.31 +0.5
1,618,231 - B158DRAFT_1563 0.32 -0.7
1,618,278 + B158DRAFT_1563 0.36 +0.3
1,618,278 + B158DRAFT_1563 0.36 +0.2
1,618,278 + B158DRAFT_1563 0.36 -0.1
1,618,278 + B158DRAFT_1563 0.36 -0.2
1,618,278 + B158DRAFT_1563 0.36 -0.5
1,618,278 + B158DRAFT_1563 0.36 +0.1
1,618,278 + B158DRAFT_1563 0.36 -0.4
1,618,278 + B158DRAFT_1563 0.36 -0.3
1,618,278 + B158DRAFT_1563 0.36 -0.2
1,618,278 + B158DRAFT_1563 0.36 -2.0
1,618,278 + B158DRAFT_1563 0.36 +0.8
1,618,286 - B158DRAFT_1563 0.37 -0.9
1,618,286 - B158DRAFT_1563 0.37 -0.7
1,618,286 - B158DRAFT_1563 0.37 -0.3
1,618,286 - B158DRAFT_1563 0.37 +0.3
1,618,286 - B158DRAFT_1563 0.37 +0.0
1,618,286 - B158DRAFT_1563 0.37 +0.4
1,618,286 - B158DRAFT_1563 0.37 -1.0
1,618,286 - B158DRAFT_1563 0.37 -0.4
1,618,286 - B158DRAFT_1563 0.37 -0.1
1,618,326 - B158DRAFT_1563 0.40 +0.4
1,618,336 - B158DRAFT_1563 0.41 -0.0
1,618,336 - B158DRAFT_1563 0.41 +0.1
1,618,378 - B158DRAFT_1563 0.45 +0.1
1,618,421 + B158DRAFT_1563 0.49 +1.0
1,618,503 + B158DRAFT_1563 0.56 -0.0
1,618,511 - B158DRAFT_1563 0.57 -0.2
1,618,520 + B158DRAFT_1563 0.58 +0.2
1,618,528 - B158DRAFT_1563 0.59 +0.1
1,618,537 - B158DRAFT_1563 0.59 +0.0
1,618,539 + B158DRAFT_1563 0.60 +0.4
1,618,629 + B158DRAFT_1563 0.68 -0.4
1,618,672 + B158DRAFT_1563 0.72 -0.2
1,618,672 + B158DRAFT_1563 0.72 -0.1
1,618,672 + B158DRAFT_1563 0.72 +0.1
1,618,672 + B158DRAFT_1563 0.72 -0.4
1,618,678 - B158DRAFT_1563 0.72 -0.3
1,618,678 - B158DRAFT_1563 0.72 +0.4
1,618,678 - B158DRAFT_1563 0.72 +0.4
1,618,678 - B158DRAFT_1563 0.72 +0.8
1,618,678 - B158DRAFT_1563 0.72 -0.0
1,618,678 - B158DRAFT_1563 0.72 +0.1
1,618,680 + B158DRAFT_1563 0.72 -0.2
1,618,680 - B158DRAFT_1563 0.72 -0.4
1,618,680 - B158DRAFT_1563 0.72 +0.0
1,618,680 - B158DRAFT_1563 0.72 -0.0
1,618,680 - B158DRAFT_1563 0.72 +0.1
1,618,682 + B158DRAFT_1563 0.73 -0.4
1,618,682 + B158DRAFT_1563 0.73 +0.2
1,618,690 - B158DRAFT_1563 0.73 -0.6
1,618,690 - B158DRAFT_1563 0.73 +0.7
1,618,690 - B158DRAFT_1563 0.73 -0.2
1,618,712 + B158DRAFT_1563 0.75 -0.1
1,618,712 + B158DRAFT_1563 0.75 -1.2
1,618,712 + B158DRAFT_1563 0.75 -0.1
1,618,712 + B158DRAFT_1563 0.75 -0.2
1,618,741 - B158DRAFT_1563 0.78 +0.3

Or see this region's nucleotide sequence