Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1166

Experiment: m.b. A22 0.04375 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1164 and B158DRAFT_1165 are separated by 128 nucleotidesB158DRAFT_1165 and B158DRAFT_1166 are separated by 52 nucleotidesB158DRAFT_1166 and B158DRAFT_1167 are separated by 2 nucleotides B158DRAFT_1164: B158DRAFT_1164 - valyl-tRNA synthetase (EC 6.1.1.9), at 1,202,749 to 1,205,520 _1164 B158DRAFT_1165: B158DRAFT_1165 - Phospholipid N-methyltransferase, at 1,205,649 to 1,206,188 _1165 B158DRAFT_1166: B158DRAFT_1166 - DNA polymerase III, chi subunit (EC 2.7.7.7), at 1,206,241 to 1,206,669 _1166 B158DRAFT_1167: B158DRAFT_1167 - Leucyl aminopeptidase, at 1,206,672 to 1,208,162 _1167 Position (kb) 1206 1207Strain fitness (log2 ratio) -1 0 1at 1205.564 kb on + strandat 1205.627 kb on + strandat 1205.694 kb on - strandat 1205.704 kb on + strand, within B158DRAFT_1165at 1205.782 kb on + strand, within B158DRAFT_1165at 1205.789 kb on - strand, within B158DRAFT_1165at 1205.895 kb on - strand, within B158DRAFT_1165at 1205.906 kb on + strand, within B158DRAFT_1165at 1205.906 kb on + strand, within B158DRAFT_1165at 1205.909 kb on - strand, within B158DRAFT_1165at 1205.917 kb on - strand, within B158DRAFT_1165at 1205.943 kb on + strand, within B158DRAFT_1165at 1205.945 kb on + strand, within B158DRAFT_1165at 1205.953 kb on + strand, within B158DRAFT_1165at 1205.953 kb on - strand, within B158DRAFT_1165at 1205.953 kb on - strand, within B158DRAFT_1165at 1205.965 kb on + strand, within B158DRAFT_1165at 1206.072 kb on + strand, within B158DRAFT_1165at 1206.134 kb on - strand, within B158DRAFT_1165at 1206.139 kb on - strandat 1206.150 kb on - strandat 1206.174 kb on + strandat 1206.271 kb on - strandat 1206.271 kb on - strandat 1206.400 kb on + strand, within B158DRAFT_1166at 1206.400 kb on + strand, within B158DRAFT_1166at 1206.403 kb on + strand, within B158DRAFT_1166at 1206.431 kb on - strand, within B158DRAFT_1166at 1206.436 kb on - strand, within B158DRAFT_1166at 1206.436 kb on - strand, within B158DRAFT_1166at 1206.490 kb on - strand, within B158DRAFT_1166at 1206.506 kb on + strand, within B158DRAFT_1166at 1206.506 kb on + strand, within B158DRAFT_1166at 1206.506 kb on + strand, within B158DRAFT_1166at 1206.506 kb on + strand, within B158DRAFT_1166at 1206.506 kb on + strand, within B158DRAFT_1166at 1206.506 kb on + strand, within B158DRAFT_1166at 1206.506 kb on + strand, within B158DRAFT_1166at 1206.506 kb on + strand, within B158DRAFT_1166at 1206.506 kb on + strand, within B158DRAFT_1166at 1206.506 kb on + strand, within B158DRAFT_1166at 1206.506 kb on + strand, within B158DRAFT_1166at 1206.506 kb on + strand, within B158DRAFT_1166at 1206.506 kb on + strand, within B158DRAFT_1166at 1206.514 kb on - strand, within B158DRAFT_1166at 1206.514 kb on - strand, within B158DRAFT_1166at 1206.514 kb on - strand, within B158DRAFT_1166at 1206.514 kb on - strand, within B158DRAFT_1166at 1206.514 kb on - strand, within B158DRAFT_1166at 1206.545 kb on - strand, within B158DRAFT_1166at 1206.556 kb on + strand, within B158DRAFT_1166at 1206.564 kb on - strand, within B158DRAFT_1166at 1206.564 kb on - strand, within B158DRAFT_1166at 1206.594 kb on - strand, within B158DRAFT_1166at 1206.742 kb on + strandat 1206.747 kb on + strandat 1206.747 kb on + strandat 1206.747 kb on + strandat 1206.747 kb on + strandat 1206.747 kb on + strandat 1206.755 kb on - strandat 1206.755 kb on - strandat 1206.755 kb on - strandat 1206.755 kb on - strandat 1206.755 kb on - strandat 1206.755 kb on - strandat 1206.755 kb on - strandat 1206.755 kb on - strandat 1206.768 kb on + strandat 1206.833 kb on - strand, within B158DRAFT_1167at 1206.887 kb on + strand, within B158DRAFT_1167at 1206.907 kb on + strand, within B158DRAFT_1167at 1207.026 kb on + strand, within B158DRAFT_1167at 1207.053 kb on + strand, within B158DRAFT_1167at 1207.077 kb on + strand, within B158DRAFT_1167at 1207.078 kb on - strand, within B158DRAFT_1167at 1207.084 kb on + strand, within B158DRAFT_1167at 1207.102 kb on - strand, within B158DRAFT_1167at 1207.104 kb on + strand, within B158DRAFT_1167at 1207.202 kb on - strand, within B158DRAFT_1167at 1207.202 kb on - strand, within B158DRAFT_1167at 1207.256 kb on + strand, within B158DRAFT_1167at 1207.256 kb on + strand, within B158DRAFT_1167at 1207.256 kb on + strand, within B158DRAFT_1167at 1207.279 kb on + strand, within B158DRAFT_1167at 1207.287 kb on - strand, within B158DRAFT_1167at 1207.322 kb on + strand, within B158DRAFT_1167at 1207.330 kb on - strand, within B158DRAFT_1167at 1207.409 kb on - strand, within B158DRAFT_1167at 1207.409 kb on - strand, within B158DRAFT_1167at 1207.409 kb on - strand, within B158DRAFT_1167at 1207.433 kb on + strand, within B158DRAFT_1167at 1207.441 kb on - strand, within B158DRAFT_1167at 1207.441 kb on - strand, within B158DRAFT_1167at 1207.476 kb on - strand, within B158DRAFT_1167at 1207.494 kb on + strand, within B158DRAFT_1167at 1207.499 kb on + strand, within B158DRAFT_1167at 1207.507 kb on - strand, within B158DRAFT_1167at 1207.516 kb on + strand, within B158DRAFT_1167at 1207.534 kb on - strand, within B158DRAFT_1167at 1207.554 kb on - strand, within B158DRAFT_1167at 1207.566 kb on + strand, within B158DRAFT_1167at 1207.615 kb on + strand, within B158DRAFT_1167at 1207.615 kb on + strand, within B158DRAFT_1167

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. A22 0.04375 mg/ml
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1,205,564 + +0.5
1,205,627 + +0.4
1,205,694 - +0.3
1,205,704 + B158DRAFT_1165 0.10 +0.4
1,205,782 + B158DRAFT_1165 0.25 -0.3
1,205,789 - B158DRAFT_1165 0.26 +0.9
1,205,895 - B158DRAFT_1165 0.46 -0.5
1,205,906 + B158DRAFT_1165 0.48 -0.4
1,205,906 + B158DRAFT_1165 0.48 +0.7
1,205,909 - B158DRAFT_1165 0.48 -1.2
1,205,917 - B158DRAFT_1165 0.50 +0.1
1,205,943 + B158DRAFT_1165 0.54 +0.4
1,205,945 + B158DRAFT_1165 0.55 -0.0
1,205,953 + B158DRAFT_1165 0.56 +0.2
1,205,953 - B158DRAFT_1165 0.56 -0.2
1,205,953 - B158DRAFT_1165 0.56 +0.2
1,205,965 + B158DRAFT_1165 0.59 +0.5
1,206,072 + B158DRAFT_1165 0.78 +1.1
1,206,134 - B158DRAFT_1165 0.90 +0.1
1,206,139 - +0.4
1,206,150 - +0.1
1,206,174 + +0.3
1,206,271 - -0.2
1,206,271 - +0.4
1,206,400 + B158DRAFT_1166 0.37 -0.2
1,206,400 + B158DRAFT_1166 0.37 +0.4
1,206,403 + B158DRAFT_1166 0.38 +0.3
1,206,431 - B158DRAFT_1166 0.44 +0.4
1,206,436 - B158DRAFT_1166 0.45 +0.0
1,206,436 - B158DRAFT_1166 0.45 +0.1
1,206,490 - B158DRAFT_1166 0.58 +0.8
1,206,506 + B158DRAFT_1166 0.62 +0.2
1,206,506 + B158DRAFT_1166 0.62 -0.0
1,206,506 + B158DRAFT_1166 0.62 +0.1
1,206,506 + B158DRAFT_1166 0.62 +0.3
1,206,506 + B158DRAFT_1166 0.62 -0.0
1,206,506 + B158DRAFT_1166 0.62 -0.3
1,206,506 + B158DRAFT_1166 0.62 -0.2
1,206,506 + B158DRAFT_1166 0.62 -0.5
1,206,506 + B158DRAFT_1166 0.62 -0.2
1,206,506 + B158DRAFT_1166 0.62 +0.5
1,206,506 + B158DRAFT_1166 0.62 -0.1
1,206,506 + B158DRAFT_1166 0.62 +0.3
1,206,506 + B158DRAFT_1166 0.62 +0.4
1,206,514 - B158DRAFT_1166 0.64 -0.2
1,206,514 - B158DRAFT_1166 0.64 +0.2
1,206,514 - B158DRAFT_1166 0.64 +0.2
1,206,514 - B158DRAFT_1166 0.64 +0.6
1,206,514 - B158DRAFT_1166 0.64 +0.5
1,206,545 - B158DRAFT_1166 0.71 -0.2
1,206,556 + B158DRAFT_1166 0.73 +0.6
1,206,564 - B158DRAFT_1166 0.75 +0.8
1,206,564 - B158DRAFT_1166 0.75 +0.1
1,206,594 - B158DRAFT_1166 0.82 +0.8
1,206,742 + +0.1
1,206,747 + -0.7
1,206,747 + +0.1
1,206,747 + -0.1
1,206,747 + -0.7
1,206,747 + -0.4
1,206,755 - -0.6
1,206,755 - +0.0
1,206,755 - -0.3
1,206,755 - +0.7
1,206,755 - +0.5
1,206,755 - -0.7
1,206,755 - +0.6
1,206,755 - -0.2
1,206,768 + -0.1
1,206,833 - B158DRAFT_1167 0.11 +0.3
1,206,887 + B158DRAFT_1167 0.14 -0.0
1,206,907 + B158DRAFT_1167 0.16 +0.7
1,207,026 + B158DRAFT_1167 0.24 -0.1
1,207,053 + B158DRAFT_1167 0.26 -0.2
1,207,077 + B158DRAFT_1167 0.27 -0.6
1,207,078 - B158DRAFT_1167 0.27 +0.0
1,207,084 + B158DRAFT_1167 0.28 -0.4
1,207,102 - B158DRAFT_1167 0.29 +0.5
1,207,104 + B158DRAFT_1167 0.29 -0.3
1,207,202 - B158DRAFT_1167 0.36 -0.1
1,207,202 - B158DRAFT_1167 0.36 -0.0
1,207,256 + B158DRAFT_1167 0.39 +1.5
1,207,256 + B158DRAFT_1167 0.39 -0.1
1,207,256 + B158DRAFT_1167 0.39 -0.4
1,207,279 + B158DRAFT_1167 0.41 +0.7
1,207,287 - B158DRAFT_1167 0.41 -0.6
1,207,322 + B158DRAFT_1167 0.44 +0.3
1,207,330 - B158DRAFT_1167 0.44 +0.3
1,207,409 - B158DRAFT_1167 0.49 +0.8
1,207,409 - B158DRAFT_1167 0.49 -0.4
1,207,409 - B158DRAFT_1167 0.49 +0.1
1,207,433 + B158DRAFT_1167 0.51 -0.9
1,207,441 - B158DRAFT_1167 0.52 -1.0
1,207,441 - B158DRAFT_1167 0.52 +0.1
1,207,476 - B158DRAFT_1167 0.54 +0.4
1,207,494 + B158DRAFT_1167 0.55 -0.6
1,207,499 + B158DRAFT_1167 0.55 +0.8
1,207,507 - B158DRAFT_1167 0.56 -0.3
1,207,516 + B158DRAFT_1167 0.57 -0.0
1,207,534 - B158DRAFT_1167 0.58 -0.5
1,207,554 - B158DRAFT_1167 0.59 -0.3
1,207,566 + B158DRAFT_1167 0.60 -0.0
1,207,615 + B158DRAFT_1167 0.63 -0.2
1,207,615 + B158DRAFT_1167 0.63 +0.2

Or see this region's nucleotide sequence