Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0908

Experiment: m.b. A22 0.04375 mg/ml

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_0907 and B158DRAFT_0908 are separated by 73 nucleotidesB158DRAFT_0908 and B158DRAFT_0909 are separated by 375 nucleotides B158DRAFT_0907: B158DRAFT_0907 - Predicted integral membrane protein, at 930,327 to 931,634 _0907 B158DRAFT_0908: B158DRAFT_0908 - Uncharacterized protein conserved in bacteria containing a pentein-type domain, at 931,708 to 932,748 _0908 B158DRAFT_0909: B158DRAFT_0909 - Transcriptional regulator, at 933,124 to 934,029 _0909 Position (kb) 931 932 933Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 930.756 kb on + strand, within B158DRAFT_0907at 930.758 kb on + strand, within B158DRAFT_0907at 930.766 kb on - strand, within B158DRAFT_0907at 930.766 kb on - strand, within B158DRAFT_0907at 930.781 kb on - strand, within B158DRAFT_0907at 930.781 kb on - strand, within B158DRAFT_0907at 930.786 kb on - strand, within B158DRAFT_0907at 930.793 kb on + strand, within B158DRAFT_0907at 930.801 kb on - strand, within B158DRAFT_0907at 930.820 kb on + strand, within B158DRAFT_0907at 930.833 kb on - strand, within B158DRAFT_0907at 930.833 kb on - strand, within B158DRAFT_0907at 930.833 kb on - strand, within B158DRAFT_0907at 930.833 kb on - strand, within B158DRAFT_0907at 930.847 kb on + strand, within B158DRAFT_0907at 930.859 kb on + strand, within B158DRAFT_0907at 930.859 kb on + strand, within B158DRAFT_0907at 930.859 kb on + strand, within B158DRAFT_0907at 930.859 kb on + strand, within B158DRAFT_0907at 930.867 kb on - strand, within B158DRAFT_0907at 930.867 kb on - strand, within B158DRAFT_0907at 930.869 kb on + strand, within B158DRAFT_0907at 930.869 kb on + strand, within B158DRAFT_0907at 930.869 kb on + strand, within B158DRAFT_0907at 930.869 kb on + strand, within B158DRAFT_0907at 930.877 kb on - strand, within B158DRAFT_0907at 930.877 kb on - strand, within B158DRAFT_0907at 930.877 kb on - strand, within B158DRAFT_0907at 930.965 kb on + strand, within B158DRAFT_0907at 930.985 kb on + strand, within B158DRAFT_0907at 930.985 kb on + strand, within B158DRAFT_0907at 930.985 kb on + strand, within B158DRAFT_0907at 931.093 kb on + strand, within B158DRAFT_0907at 931.159 kb on - strand, within B158DRAFT_0907at 931.217 kb on + strand, within B158DRAFT_0907at 931.230 kb on - strand, within B158DRAFT_0907at 931.250 kb on + strand, within B158DRAFT_0907at 931.307 kb on - strand, within B158DRAFT_0907at 931.441 kb on - strand, within B158DRAFT_0907at 931.501 kb on + strand, within B158DRAFT_0907at 931.605 kb on + strandat 931.622 kb on + strandat 931.790 kb on + strandat 931.840 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.968 kb on + strand, within B158DRAFT_0908at 931.976 kb on + strand, within B158DRAFT_0908at 931.976 kb on - strand, within B158DRAFT_0908at 932.071 kb on + strand, within B158DRAFT_0908at 932.116 kb on + strand, within B158DRAFT_0908at 932.124 kb on - strand, within B158DRAFT_0908at 932.124 kb on - strand, within B158DRAFT_0908at 932.236 kb on - strand, within B158DRAFT_0908at 932.310 kb on + strand, within B158DRAFT_0908at 932.351 kb on + strand, within B158DRAFT_0908at 932.358 kb on + strand, within B158DRAFT_0908at 932.358 kb on + strand, within B158DRAFT_0908at 932.358 kb on + strand, within B158DRAFT_0908at 932.398 kb on + strand, within B158DRAFT_0908at 932.430 kb on + strand, within B158DRAFT_0908at 932.445 kb on - strand, within B158DRAFT_0908at 932.517 kb on + strand, within B158DRAFT_0908at 932.517 kb on + strand, within B158DRAFT_0908at 932.517 kb on + strand, within B158DRAFT_0908at 932.517 kb on + strand, within B158DRAFT_0908at 932.525 kb on - strand, within B158DRAFT_0908at 932.525 kb on - strand, within B158DRAFT_0908at 932.525 kb on - strand, within B158DRAFT_0908at 932.533 kb on + strand, within B158DRAFT_0908at 932.621 kb on - strand, within B158DRAFT_0908at 932.746 kb on + strandat 932.800 kb on - strandat 932.851 kb on + strandat 932.857 kb on + strandat 932.857 kb on + strandat 932.859 kb on - strandat 932.865 kb on - strandat 932.954 kb on - strandat 933.029 kb on + strandat 933.126 kb on + strandat 933.134 kb on - strandat 933.134 kb on - strandat 933.134 kb on - strandat 933.134 kb on - strandat 933.134 kb on - strandat 933.142 kb on - strandat 933.152 kb on + strandat 933.189 kb on - strandat 933.321 kb on - strand, within B158DRAFT_0909at 933.368 kb on + strand, within B158DRAFT_0909at 933.381 kb on + strand, within B158DRAFT_0909at 933.389 kb on - strand, within B158DRAFT_0909at 933.389 kb on - strand, within B158DRAFT_0909at 933.389 kb on - strand, within B158DRAFT_0909at 933.389 kb on - strand, within B158DRAFT_0909at 933.460 kb on - strand, within B158DRAFT_0909at 933.571 kb on + strand, within B158DRAFT_0909at 933.665 kb on + strand, within B158DRAFT_0909at 933.673 kb on - strand, within B158DRAFT_0909at 933.737 kb on + strand, within B158DRAFT_0909

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. A22 0.04375 mg/ml
remove
930,756 + B158DRAFT_0907 0.33 -0.9
930,758 + B158DRAFT_0907 0.33 +0.5
930,766 - B158DRAFT_0907 0.34 +0.3
930,766 - B158DRAFT_0907 0.34 -0.3
930,781 - B158DRAFT_0907 0.35 -0.0
930,781 - B158DRAFT_0907 0.35 +0.1
930,786 - B158DRAFT_0907 0.35 +0.5
930,793 + B158DRAFT_0907 0.36 +0.4
930,801 - B158DRAFT_0907 0.36 -1.4
930,820 + B158DRAFT_0907 0.38 +0.0
930,833 - B158DRAFT_0907 0.39 +0.4
930,833 - B158DRAFT_0907 0.39 -0.8
930,833 - B158DRAFT_0907 0.39 +0.2
930,833 - B158DRAFT_0907 0.39 +0.8
930,847 + B158DRAFT_0907 0.40 +0.3
930,859 + B158DRAFT_0907 0.41 -0.1
930,859 + B158DRAFT_0907 0.41 +0.5
930,859 + B158DRAFT_0907 0.41 +0.1
930,859 + B158DRAFT_0907 0.41 +0.2
930,867 - B158DRAFT_0907 0.41 +0.6
930,867 - B158DRAFT_0907 0.41 +0.0
930,869 + B158DRAFT_0907 0.41 -0.1
930,869 + B158DRAFT_0907 0.41 +0.4
930,869 + B158DRAFT_0907 0.41 +0.1
930,869 + B158DRAFT_0907 0.41 -0.6
930,877 - B158DRAFT_0907 0.42 +0.1
930,877 - B158DRAFT_0907 0.42 -0.0
930,877 - B158DRAFT_0907 0.42 -0.0
930,965 + B158DRAFT_0907 0.49 +1.2
930,985 + B158DRAFT_0907 0.50 +0.1
930,985 + B158DRAFT_0907 0.50 -0.1
930,985 + B158DRAFT_0907 0.50 +0.5
931,093 + B158DRAFT_0907 0.59 +0.2
931,159 - B158DRAFT_0907 0.64 +0.5
931,217 + B158DRAFT_0907 0.68 +0.7
931,230 - B158DRAFT_0907 0.69 -0.0
931,250 + B158DRAFT_0907 0.71 -0.9
931,307 - B158DRAFT_0907 0.75 +0.3
931,441 - B158DRAFT_0907 0.85 -0.2
931,501 + B158DRAFT_0907 0.90 +0.4
931,605 + -1.2
931,622 + +0.4
931,790 + +0.0
931,840 + B158DRAFT_0908 0.13 +0.6
931,932 + B158DRAFT_0908 0.22 +0.0
931,932 + B158DRAFT_0908 0.22 -0.3
931,932 + B158DRAFT_0908 0.22 +0.4
931,932 + B158DRAFT_0908 0.22 +0.3
931,932 + B158DRAFT_0908 0.22 +0.7
931,932 + B158DRAFT_0908 0.22 -0.1
931,932 + B158DRAFT_0908 0.22 -0.4
931,932 + B158DRAFT_0908 0.22 +0.1
931,932 + B158DRAFT_0908 0.22 +0.8
931,932 + B158DRAFT_0908 0.22 +0.2
931,932 + B158DRAFT_0908 0.22 -0.1
931,932 + B158DRAFT_0908 0.22 -1.0
931,932 + B158DRAFT_0908 0.22 +0.0
931,932 + B158DRAFT_0908 0.22 +0.4
931,932 + B158DRAFT_0908 0.22 +0.5
931,932 + B158DRAFT_0908 0.22 -0.3
931,932 + B158DRAFT_0908 0.22 -0.2
931,932 + B158DRAFT_0908 0.22 +0.4
931,932 + B158DRAFT_0908 0.22 +0.3
931,932 + B158DRAFT_0908 0.22 +0.1
931,932 + B158DRAFT_0908 0.22 +0.5
931,932 + B158DRAFT_0908 0.22 -0.5
931,932 + B158DRAFT_0908 0.22 +1.3
931,940 - B158DRAFT_0908 0.22 -0.4
931,940 - B158DRAFT_0908 0.22 +1.4
931,940 - B158DRAFT_0908 0.22 -0.1
931,940 - B158DRAFT_0908 0.22 -0.3
931,940 - B158DRAFT_0908 0.22 -0.2
931,940 - B158DRAFT_0908 0.22 -0.1
931,940 - B158DRAFT_0908 0.22 -0.0
931,940 - B158DRAFT_0908 0.22 +0.2
931,940 - B158DRAFT_0908 0.22 +0.3
931,940 - B158DRAFT_0908 0.22 -0.0
931,940 - B158DRAFT_0908 0.22 +0.3
931,940 - B158DRAFT_0908 0.22 +0.0
931,940 - B158DRAFT_0908 0.22 -0.1
931,940 - B158DRAFT_0908 0.22 +0.5
931,940 - B158DRAFT_0908 0.22 +0.1
931,940 - B158DRAFT_0908 0.22 -0.2
931,940 - B158DRAFT_0908 0.22 +1.8
931,940 - B158DRAFT_0908 0.22 -0.0
931,940 - B158DRAFT_0908 0.22 -0.8
931,940 - B158DRAFT_0908 0.22 +0.5
931,940 - B158DRAFT_0908 0.22 +0.4
931,940 - B158DRAFT_0908 0.22 -0.1
931,940 - B158DRAFT_0908 0.22 -0.2
931,940 - B158DRAFT_0908 0.22 -0.5
931,940 - B158DRAFT_0908 0.22 -0.3
931,940 - B158DRAFT_0908 0.22 -0.0
931,940 - B158DRAFT_0908 0.22 -0.3
931,940 - B158DRAFT_0908 0.22 -0.4
931,940 - B158DRAFT_0908 0.22 +0.1
931,940 - B158DRAFT_0908 0.22 -0.0
931,940 - B158DRAFT_0908 0.22 +0.0
931,968 + B158DRAFT_0908 0.25 -0.7
931,976 + B158DRAFT_0908 0.26 +0.2
931,976 - B158DRAFT_0908 0.26 -0.8
932,071 + B158DRAFT_0908 0.35 -0.3
932,116 + B158DRAFT_0908 0.39 +0.2
932,124 - B158DRAFT_0908 0.40 +0.5
932,124 - B158DRAFT_0908 0.40 -1.1
932,236 - B158DRAFT_0908 0.51 -1.1
932,310 + B158DRAFT_0908 0.58 +0.0
932,351 + B158DRAFT_0908 0.62 -4.2
932,358 + B158DRAFT_0908 0.62 +0.0
932,358 + B158DRAFT_0908 0.62 +0.4
932,358 + B158DRAFT_0908 0.62 -0.2
932,398 + B158DRAFT_0908 0.66 +0.5
932,430 + B158DRAFT_0908 0.69 +0.0
932,445 - B158DRAFT_0908 0.71 -0.0
932,517 + B158DRAFT_0908 0.78 +0.2
932,517 + B158DRAFT_0908 0.78 +0.9
932,517 + B158DRAFT_0908 0.78 +0.0
932,517 + B158DRAFT_0908 0.78 -0.5
932,525 - B158DRAFT_0908 0.78 -0.2
932,525 - B158DRAFT_0908 0.78 +0.1
932,525 - B158DRAFT_0908 0.78 +0.1
932,533 + B158DRAFT_0908 0.79 -0.2
932,621 - B158DRAFT_0908 0.88 +0.2
932,746 + +0.9
932,800 - +0.0
932,851 + +0.8
932,857 + +0.5
932,857 + +0.3
932,859 - +0.4
932,865 - +0.4
932,954 - -1.1
933,029 + -0.6
933,126 + -1.7
933,134 - -1.0
933,134 - -1.8
933,134 - -3.7
933,134 - -2.3
933,134 - -1.1
933,142 - -1.0
933,152 + -1.5
933,189 - -0.9
933,321 - B158DRAFT_0909 0.22 -1.4
933,368 + B158DRAFT_0909 0.27 -0.7
933,381 + B158DRAFT_0909 0.28 -0.9
933,389 - B158DRAFT_0909 0.29 -1.0
933,389 - B158DRAFT_0909 0.29 -1.9
933,389 - B158DRAFT_0909 0.29 +0.0
933,389 - B158DRAFT_0909 0.29 -1.0
933,460 - B158DRAFT_0909 0.37 -0.4
933,571 + B158DRAFT_0909 0.49 -2.0
933,665 + B158DRAFT_0909 0.60 -1.4
933,673 - B158DRAFT_0909 0.61 -1.5
933,737 + B158DRAFT_0909 0.68 -2.7

Or see this region's nucleotide sequence