Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0677

Experiment: m.b. A22 0.04375 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0676 and B158DRAFT_0677 are separated by 124 nucleotidesB158DRAFT_0677 and B158DRAFT_0678 are separated by 29 nucleotidesB158DRAFT_0678 and B158DRAFT_0679 are separated by 67 nucleotides B158DRAFT_0676: B158DRAFT_0676 - Lauroyl/myristoyl acyltransferase, at 678,299 to 679,789 _0676 B158DRAFT_0677: B158DRAFT_0677 - Uncharacterized small membrane protein, at 679,914 to 680,294 _0677 B158DRAFT_0678: B158DRAFT_0678 - TIGR02444 family protein, at 680,324 to 680,830 _0678 B158DRAFT_0679: B158DRAFT_0679 - FKBP-type peptidyl-prolyl cis-trans isomerases 1, at 680,898 to 681,845 _0679 Position (kb) 679 680 681Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 678.944 kb on - strand, within B158DRAFT_0676at 678.957 kb on + strand, within B158DRAFT_0676at 678.965 kb on - strand, within B158DRAFT_0676at 678.965 kb on - strand, within B158DRAFT_0676at 678.965 kb on - strand, within B158DRAFT_0676at 678.967 kb on + strand, within B158DRAFT_0676at 678.967 kb on + strand, within B158DRAFT_0676at 678.967 kb on + strand, within B158DRAFT_0676at 678.967 kb on + strand, within B158DRAFT_0676at 678.975 kb on - strand, within B158DRAFT_0676at 678.975 kb on - strand, within B158DRAFT_0676at 679.031 kb on - strand, within B158DRAFT_0676at 679.052 kb on + strand, within B158DRAFT_0676at 679.060 kb on - strand, within B158DRAFT_0676at 679.078 kb on - strand, within B158DRAFT_0676at 679.108 kb on + strand, within B158DRAFT_0676at 679.116 kb on + strand, within B158DRAFT_0676at 679.116 kb on + strand, within B158DRAFT_0676at 679.116 kb on + strand, within B158DRAFT_0676at 679.116 kb on + strand, within B158DRAFT_0676at 679.124 kb on - strand, within B158DRAFT_0676at 679.138 kb on + strand, within B158DRAFT_0676at 679.156 kb on - strand, within B158DRAFT_0676at 679.226 kb on - strand, within B158DRAFT_0676at 679.291 kb on + strand, within B158DRAFT_0676at 679.315 kb on + strand, within B158DRAFT_0676at 679.320 kb on + strand, within B158DRAFT_0676at 679.320 kb on + strand, within B158DRAFT_0676at 679.366 kb on + strand, within B158DRAFT_0676at 679.366 kb on + strand, within B158DRAFT_0676at 679.366 kb on + strand, within B158DRAFT_0676at 679.407 kb on - strand, within B158DRAFT_0676at 679.407 kb on - strand, within B158DRAFT_0676at 679.412 kb on - strand, within B158DRAFT_0676at 679.468 kb on + strand, within B158DRAFT_0676at 679.512 kb on + strand, within B158DRAFT_0676at 679.512 kb on + strand, within B158DRAFT_0676at 679.521 kb on - strand, within B158DRAFT_0676at 679.523 kb on + strand, within B158DRAFT_0676at 679.523 kb on + strand, within B158DRAFT_0676at 679.523 kb on + strand, within B158DRAFT_0676at 679.523 kb on + strand, within B158DRAFT_0676at 679.531 kb on - strand, within B158DRAFT_0676at 679.531 kb on - strand, within B158DRAFT_0676at 679.531 kb on - strand, within B158DRAFT_0676at 679.531 kb on - strand, within B158DRAFT_0676at 679.531 kb on - strand, within B158DRAFT_0676at 679.531 kb on - strand, within B158DRAFT_0676at 679.531 kb on - strand, within B158DRAFT_0676at 679.531 kb on - strand, within B158DRAFT_0676at 679.545 kb on + strand, within B158DRAFT_0676at 679.581 kb on + strand, within B158DRAFT_0676at 679.588 kb on + strand, within B158DRAFT_0676at 679.588 kb on + strand, within B158DRAFT_0676at 679.593 kb on + strand, within B158DRAFT_0676at 679.593 kb on + strand, within B158DRAFT_0676at 679.593 kb on + strand, within B158DRAFT_0676at 679.596 kb on - strand, within B158DRAFT_0676at 679.601 kb on - strand, within B158DRAFT_0676at 679.636 kb on + strand, within B158DRAFT_0676at 679.657 kb on - strandat 679.673 kb on + strandat 679.699 kb on - strandat 679.709 kb on + strandat 679.714 kb on + strandat 679.883 kb on + strandat 679.884 kb on - strandat 679.891 kb on - strandat 679.893 kb on + strandat 679.946 kb on + strandat 679.960 kb on + strand, within B158DRAFT_0677at 679.965 kb on + strand, within B158DRAFT_0677at 679.990 kb on + strand, within B158DRAFT_0677at 679.990 kb on + strand, within B158DRAFT_0677at 679.990 kb on + strand, within B158DRAFT_0677at 679.990 kb on + strand, within B158DRAFT_0677at 679.998 kb on - strand, within B158DRAFT_0677at 680.011 kb on + strand, within B158DRAFT_0677at 680.110 kb on - strand, within B158DRAFT_0677at 680.110 kb on - strand, within B158DRAFT_0677at 680.110 kb on - strand, within B158DRAFT_0677at 680.163 kb on - strand, within B158DRAFT_0677at 680.255 kb on - strand, within B158DRAFT_0677at 680.255 kb on - strand, within B158DRAFT_0677at 680.262 kb on + strandat 680.262 kb on + strandat 680.262 kb on + strandat 680.270 kb on - strandat 680.270 kb on - strandat 680.283 kb on - strandat 680.283 kb on - strandat 680.323 kb on - strandat 680.377 kb on - strand, within B158DRAFT_0678at 680.409 kb on - strand, within B158DRAFT_0678at 680.409 kb on - strand, within B158DRAFT_0678at 680.423 kb on + strand, within B158DRAFT_0678at 680.423 kb on + strand, within B158DRAFT_0678at 680.441 kb on - strand, within B158DRAFT_0678at 680.480 kb on - strand, within B158DRAFT_0678at 680.480 kb on - strand, within B158DRAFT_0678at 680.480 kb on - strand, within B158DRAFT_0678at 680.488 kb on - strand, within B158DRAFT_0678at 680.488 kb on - strand, within B158DRAFT_0678at 680.531 kb on + strand, within B158DRAFT_0678at 680.539 kb on - strand, within B158DRAFT_0678at 680.539 kb on - strand, within B158DRAFT_0678at 680.566 kb on - strand, within B158DRAFT_0678at 680.666 kb on + strand, within B158DRAFT_0678at 680.666 kb on + strand, within B158DRAFT_0678at 680.666 kb on + strand, within B158DRAFT_0678at 680.674 kb on - strand, within B158DRAFT_0678at 680.674 kb on - strand, within B158DRAFT_0678at 680.674 kb on - strand, within B158DRAFT_0678at 680.674 kb on - strand, within B158DRAFT_0678at 680.770 kb on + strand, within B158DRAFT_0678at 680.771 kb on + strand, within B158DRAFT_0678at 680.777 kb on + strand, within B158DRAFT_0678at 680.800 kb on + strandat 680.803 kb on - strandat 680.818 kb on - strandat 680.824 kb on + strandat 680.824 kb on + strandat 680.824 kb on + strandat 680.824 kb on + strandat 680.824 kb on + strandat 680.824 kb on + strandat 680.824 kb on + strandat 680.824 kb on + strandat 680.824 kb on + strandat 680.824 kb on + strandat 680.832 kb on - strandat 680.832 kb on - strandat 680.832 kb on - strandat 680.832 kb on - strandat 680.832 kb on - strandat 680.851 kb on + strandat 680.921 kb on - strandat 680.944 kb on + strandat 680.944 kb on + strandat 680.947 kb on - strandat 680.952 kb on - strandat 680.959 kb on + strandat 680.998 kb on + strand, within B158DRAFT_0679at 680.998 kb on + strand, within B158DRAFT_0679at 681.006 kb on - strand, within B158DRAFT_0679at 681.032 kb on - strand, within B158DRAFT_0679at 681.094 kb on + strand, within B158DRAFT_0679at 681.094 kb on + strand, within B158DRAFT_0679at 681.134 kb on + strand, within B158DRAFT_0679at 681.200 kb on + strand, within B158DRAFT_0679at 681.210 kb on + strand, within B158DRAFT_0679at 681.251 kb on - strand, within B158DRAFT_0679

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. A22 0.04375 mg/ml
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678,944 - B158DRAFT_0676 0.43 -2.8
678,957 + B158DRAFT_0676 0.44 -5.2
678,965 - B158DRAFT_0676 0.45 -0.1
678,965 - B158DRAFT_0676 0.45 -3.2
678,965 - B158DRAFT_0676 0.45 -2.4
678,967 + B158DRAFT_0676 0.45 -3.3
678,967 + B158DRAFT_0676 0.45 -4.1
678,967 + B158DRAFT_0676 0.45 -2.6
678,967 + B158DRAFT_0676 0.45 -2.1
678,975 - B158DRAFT_0676 0.45 -2.7
678,975 - B158DRAFT_0676 0.45 -1.8
679,031 - B158DRAFT_0676 0.49 -3.6
679,052 + B158DRAFT_0676 0.51 -2.9
679,060 - B158DRAFT_0676 0.51 -1.3
679,078 - B158DRAFT_0676 0.52 -2.4
679,108 + B158DRAFT_0676 0.54 -2.6
679,116 + B158DRAFT_0676 0.55 -2.1
679,116 + B158DRAFT_0676 0.55 -1.4
679,116 + B158DRAFT_0676 0.55 -3.7
679,116 + B158DRAFT_0676 0.55 -1.8
679,124 - B158DRAFT_0676 0.55 -1.3
679,138 + B158DRAFT_0676 0.56 -1.8
679,156 - B158DRAFT_0676 0.57 -2.4
679,226 - B158DRAFT_0676 0.62 -1.4
679,291 + B158DRAFT_0676 0.67 -2.8
679,315 + B158DRAFT_0676 0.68 -1.8
679,320 + B158DRAFT_0676 0.68 -2.1
679,320 + B158DRAFT_0676 0.68 -3.5
679,366 + B158DRAFT_0676 0.72 -2.3
679,366 + B158DRAFT_0676 0.72 +0.2
679,366 + B158DRAFT_0676 0.72 -4.2
679,407 - B158DRAFT_0676 0.74 -2.6
679,407 - B158DRAFT_0676 0.74 -4.5
679,412 - B158DRAFT_0676 0.75 -2.3
679,468 + B158DRAFT_0676 0.78 -1.4
679,512 + B158DRAFT_0676 0.81 -2.4
679,512 + B158DRAFT_0676 0.81 +0.2
679,521 - B158DRAFT_0676 0.82 -2.1
679,523 + B158DRAFT_0676 0.82 -1.8
679,523 + B158DRAFT_0676 0.82 -1.1
679,523 + B158DRAFT_0676 0.82 -1.1
679,523 + B158DRAFT_0676 0.82 -1.7
679,531 - B158DRAFT_0676 0.83 -3.5
679,531 - B158DRAFT_0676 0.83 -1.4
679,531 - B158DRAFT_0676 0.83 -3.7
679,531 - B158DRAFT_0676 0.83 -1.9
679,531 - B158DRAFT_0676 0.83 -2.4
679,531 - B158DRAFT_0676 0.83 -2.4
679,531 - B158DRAFT_0676 0.83 -2.7
679,531 - B158DRAFT_0676 0.83 -1.6
679,545 + B158DRAFT_0676 0.84 -2.1
679,581 + B158DRAFT_0676 0.86 -3.1
679,588 + B158DRAFT_0676 0.86 -3.0
679,588 + B158DRAFT_0676 0.86 -3.5
679,593 + B158DRAFT_0676 0.87 -2.4
679,593 + B158DRAFT_0676 0.87 -3.1
679,593 + B158DRAFT_0676 0.87 -0.4
679,596 - B158DRAFT_0676 0.87 -2.4
679,601 - B158DRAFT_0676 0.87 -1.7
679,636 + B158DRAFT_0676 0.90 -1.5
679,657 - -3.6
679,673 + +0.2
679,699 - -2.6
679,709 + -2.2
679,714 + -2.4
679,883 + -0.2
679,884 - -0.5
679,891 - +0.2
679,893 + -0.1
679,946 + -0.0
679,960 + B158DRAFT_0677 0.12 -0.7
679,965 + B158DRAFT_0677 0.13 -0.1
679,990 + B158DRAFT_0677 0.20 -0.7
679,990 + B158DRAFT_0677 0.20 +0.2
679,990 + B158DRAFT_0677 0.20 -0.1
679,990 + B158DRAFT_0677 0.20 -0.3
679,998 - B158DRAFT_0677 0.22 +0.0
680,011 + B158DRAFT_0677 0.25 +0.1
680,110 - B158DRAFT_0677 0.51 +0.2
680,110 - B158DRAFT_0677 0.51 +0.4
680,110 - B158DRAFT_0677 0.51 -0.1
680,163 - B158DRAFT_0677 0.65 +0.1
680,255 - B158DRAFT_0677 0.90 +0.2
680,255 - B158DRAFT_0677 0.90 +0.4
680,262 + +0.5
680,262 + +1.2
680,262 + -0.1
680,270 - +0.2
680,270 - +0.5
680,283 - +0.2
680,283 - -0.1
680,323 - +0.2
680,377 - B158DRAFT_0678 0.10 +0.5
680,409 - B158DRAFT_0678 0.17 -0.3
680,409 - B158DRAFT_0678 0.17 +0.7
680,423 + B158DRAFT_0678 0.20 +0.6
680,423 + B158DRAFT_0678 0.20 +0.5
680,441 - B158DRAFT_0678 0.23 -4.0
680,480 - B158DRAFT_0678 0.31 +0.6
680,480 - B158DRAFT_0678 0.31 -0.5
680,480 - B158DRAFT_0678 0.31 +0.1
680,488 - B158DRAFT_0678 0.32 -0.5
680,488 - B158DRAFT_0678 0.32 +0.7
680,531 + B158DRAFT_0678 0.41 +0.5
680,539 - B158DRAFT_0678 0.42 +0.6
680,539 - B158DRAFT_0678 0.42 +0.8
680,566 - B158DRAFT_0678 0.48 +0.7
680,666 + B158DRAFT_0678 0.67 +0.5
680,666 + B158DRAFT_0678 0.67 +1.4
680,666 + B158DRAFT_0678 0.67 +0.2
680,674 - B158DRAFT_0678 0.69 -0.1
680,674 - B158DRAFT_0678 0.69 -0.5
680,674 - B158DRAFT_0678 0.69 +0.3
680,674 - B158DRAFT_0678 0.69 +0.0
680,770 + B158DRAFT_0678 0.88 -2.5
680,771 + B158DRAFT_0678 0.88 +0.2
680,777 + B158DRAFT_0678 0.89 -1.3
680,800 + -0.0
680,803 - -0.5
680,818 - +0.0
680,824 + -0.7
680,824 + +0.3
680,824 + +0.5
680,824 + -0.1
680,824 + -0.2
680,824 + +1.2
680,824 + +0.4
680,824 + -0.2
680,824 + +1.4
680,824 + +0.0
680,832 - -1.3
680,832 - -0.5
680,832 - +0.2
680,832 - +0.3
680,832 - -0.1
680,851 + -0.9
680,921 - -0.1
680,944 + -0.6
680,944 + +0.2
680,947 - -0.2
680,952 - -0.4
680,959 + -1.3
680,998 + B158DRAFT_0679 0.11 +0.0
680,998 + B158DRAFT_0679 0.11 +0.1
681,006 - B158DRAFT_0679 0.11 -0.5
681,032 - B158DRAFT_0679 0.14 -0.7
681,094 + B158DRAFT_0679 0.21 +0.4
681,094 + B158DRAFT_0679 0.21 +0.2
681,134 + B158DRAFT_0679 0.25 +0.4
681,200 + B158DRAFT_0679 0.32 -0.1
681,210 + B158DRAFT_0679 0.33 +0.2
681,251 - B158DRAFT_0679 0.37 +0.8

Or see this region's nucleotide sequence