Experiment: m.b. Cephalothin 0.0049 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2419 and B158DRAFT_2420 overlap by 4 nucleotides B158DRAFT_2420 and B158DRAFT_2421 are separated by 4 nucleotides B158DRAFT_2421 and B158DRAFT_2422 are separated by 11 nucleotides
B158DRAFT_2419: B158DRAFT_2419 - type IV pilus modification protein PilV, at 590,559 to 591,152
_2419
B158DRAFT_2420: B158DRAFT_2420 - prepilin-type N-terminal cleavage/methylation domain, at 591,149 to 591,949
_2420
B158DRAFT_2421: B158DRAFT_2421 - hypothetical protein, at 591,954 to 592,511
_2421
B158DRAFT_2422: B158DRAFT_2422 - Tfp pilus assembly protein, tip-associated adhesin PilY1, at 592,523 to 595,474
_2422
Position (kb) 591
592
593 Strain fitness (log2 ratio) -1
0
1
2 at 591.006 kb on - strand, within B158DRAFT_2419 at 591.246 kb on - strand, within B158DRAFT_2420 at 591.359 kb on + strand, within B158DRAFT_2420 at 591.367 kb on - strand, within B158DRAFT_2420 at 591.380 kb on + strand, within B158DRAFT_2420 at 591.421 kb on + strand, within B158DRAFT_2420 at 591.520 kb on + strand, within B158DRAFT_2420 at 591.522 kb on + strand, within B158DRAFT_2420 at 591.522 kb on + strand, within B158DRAFT_2420 at 591.522 kb on + strand, within B158DRAFT_2420 at 591.530 kb on - strand, within B158DRAFT_2420 at 591.530 kb on - strand, within B158DRAFT_2420 at 591.543 kb on - strand, within B158DRAFT_2420 at 591.612 kb on - strand, within B158DRAFT_2420 at 591.842 kb on + strand, within B158DRAFT_2420 at 591.842 kb on + strand, within B158DRAFT_2420 at 591.842 kb on + strand, within B158DRAFT_2420 at 591.850 kb on - strand, within B158DRAFT_2420 at 591.851 kb on - strand, within B158DRAFT_2420 at 592.084 kb on + strand, within B158DRAFT_2421 at 592.157 kb on - strand, within B158DRAFT_2421 at 592.226 kb on - strand, within B158DRAFT_2421 at 592.258 kb on + strand, within B158DRAFT_2421 at 592.271 kb on + strand, within B158DRAFT_2421 at 592.343 kb on - strand, within B158DRAFT_2421 at 592.483 kb on - strand at 592.506 kb on + strand at 592.563 kb on - strand at 592.621 kb on + strand at 592.629 kb on - strand at 592.629 kb on - strand at 592.684 kb on + strand at 592.700 kb on - strand at 592.904 kb on - strand, within B158DRAFT_2422 at 592.963 kb on + strand, within B158DRAFT_2422 at 592.971 kb on - strand, within B158DRAFT_2422 at 593.201 kb on - strand, within B158DRAFT_2422 at 593.201 kb on - strand, within B158DRAFT_2422 at 593.201 kb on - strand, within B158DRAFT_2422 at 593.211 kb on - strand, within B158DRAFT_2422 at 593.211 kb on - strand, within B158DRAFT_2422 at 593.326 kb on + strand, within B158DRAFT_2422
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cephalothin 0.0049 mg/ml remove 591,006 - B158DRAFT_2419 0.75 +0.3 591,246 - B158DRAFT_2420 0.12 -0.2 591,359 + B158DRAFT_2420 0.26 -0.8 591,367 - B158DRAFT_2420 0.27 +0.4 591,380 + B158DRAFT_2420 0.29 +0.1 591,421 + B158DRAFT_2420 0.34 +0.7 591,520 + B158DRAFT_2420 0.46 -0.5 591,522 + B158DRAFT_2420 0.47 +0.6 591,522 + B158DRAFT_2420 0.47 -1.2 591,522 + B158DRAFT_2420 0.47 +0.7 591,530 - B158DRAFT_2420 0.48 +0.8 591,530 - B158DRAFT_2420 0.48 +0.4 591,543 - B158DRAFT_2420 0.49 -0.4 591,612 - B158DRAFT_2420 0.58 -1.2 591,842 + B158DRAFT_2420 0.87 -1.5 591,842 + B158DRAFT_2420 0.87 -0.6 591,842 + B158DRAFT_2420 0.87 +0.1 591,850 - B158DRAFT_2420 0.88 +0.0 591,851 - B158DRAFT_2420 0.88 -0.4 592,084 + B158DRAFT_2421 0.23 +1.8 592,157 - B158DRAFT_2421 0.36 +0.5 592,226 - B158DRAFT_2421 0.49 -0.0 592,258 + B158DRAFT_2421 0.54 +0.7 592,271 + B158DRAFT_2421 0.57 +0.4 592,343 - B158DRAFT_2421 0.70 +0.2 592,483 - -0.1 592,506 + -0.1 592,563 - +0.1 592,621 + +0.2 592,629 - +0.5 592,629 - +1.0 592,684 + +0.8 592,700 - -0.6 592,904 - B158DRAFT_2422 0.13 +0.4 592,963 + B158DRAFT_2422 0.15 -0.6 592,971 - B158DRAFT_2422 0.15 +0.2 593,201 - B158DRAFT_2422 0.23 +0.6 593,201 - B158DRAFT_2422 0.23 -0.4 593,201 - B158DRAFT_2422 0.23 -0.1 593,211 - B158DRAFT_2422 0.23 -0.0 593,211 - B158DRAFT_2422 0.23 -0.5 593,326 + B158DRAFT_2422 0.27 +0.7
Or see this region's nucleotide sequence