Experiment: m.b. Cephalothin 0.0049 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1060 and B158DRAFT_1061 are separated by 15 nucleotides B158DRAFT_1061 and B158DRAFT_1062 are separated by 87 nucleotides B158DRAFT_1062 and B158DRAFT_1063 are separated by 12 nucleotides B158DRAFT_1063 and B158DRAFT_1064 are separated by 17 nucleotides
B158DRAFT_1060: B158DRAFT_1060 - FOG: LysM repeat, at 1,100,886 to 1,102,430
_1060
B158DRAFT_1061: B158DRAFT_1061 - hydroxyacylglutathione hydrolase, at 1,102,446 to 1,103,246
_1061
B158DRAFT_1062: B158DRAFT_1062 - Methylase involved in ubiquinone/menaquinone biosynthesis, at 1,103,334 to 1,104,053
_1062
B158DRAFT_1063: B158DRAFT_1063 - Ribonuclease HI, at 1,104,066 to 1,104,515
_1063
B158DRAFT_1064: B158DRAFT_1064 - DNA polymerase III, epsilon subunit, Proteobacterial, at 1,104,533 to 1,105,234
_1064
Position (kb)
1103
1104
1105 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5
6
7
8
9
10 at 1102.387 kb on - strand at 1102.492 kb on + strand at 1102.492 kb on + strand at 1102.500 kb on - strand at 1102.500 kb on - strand at 1102.500 kb on - strand at 1102.528 kb on + strand, within B158DRAFT_1061 at 1102.528 kb on + strand, within B158DRAFT_1061 at 1102.544 kb on + strand, within B158DRAFT_1061 at 1102.544 kb on + strand, within B158DRAFT_1061 at 1102.552 kb on - strand, within B158DRAFT_1061 at 1102.613 kb on + strand, within B158DRAFT_1061 at 1102.620 kb on + strand, within B158DRAFT_1061 at 1102.650 kb on + strand, within B158DRAFT_1061 at 1102.655 kb on + strand, within B158DRAFT_1061 at 1102.655 kb on + strand, within B158DRAFT_1061 at 1102.655 kb on + strand, within B158DRAFT_1061 at 1102.655 kb on + strand, within B158DRAFT_1061 at 1102.655 kb on + strand, within B158DRAFT_1061 at 1102.655 kb on + strand, within B158DRAFT_1061 at 1102.655 kb on + strand, within B158DRAFT_1061 at 1102.663 kb on - strand, within B158DRAFT_1061 at 1102.663 kb on - strand, within B158DRAFT_1061 at 1102.663 kb on - strand, within B158DRAFT_1061 at 1102.663 kb on - strand, within B158DRAFT_1061 at 1102.698 kb on + strand, within B158DRAFT_1061 at 1102.763 kb on - strand, within B158DRAFT_1061 at 1102.797 kb on - strand, within B158DRAFT_1061 at 1102.815 kb on - strand, within B158DRAFT_1061 at 1102.821 kb on - strand, within B158DRAFT_1061 at 1102.860 kb on + strand, within B158DRAFT_1061 at 1102.885 kb on + strand, within B158DRAFT_1061 at 1102.886 kb on - strand, within B158DRAFT_1061 at 1102.966 kb on - strand, within B158DRAFT_1061 at 1102.972 kb on - strand, within B158DRAFT_1061 at 1103.009 kb on - strand, within B158DRAFT_1061 at 1103.034 kb on + strand, within B158DRAFT_1061 at 1103.034 kb on + strand, within B158DRAFT_1061 at 1103.034 kb on + strand, within B158DRAFT_1061 at 1103.034 kb on + strand, within B158DRAFT_1061 at 1103.042 kb on - strand, within B158DRAFT_1061 at 1103.097 kb on - strand, within B158DRAFT_1061 at 1103.115 kb on + strand, within B158DRAFT_1061 at 1103.123 kb on - strand, within B158DRAFT_1061 at 1103.123 kb on - strand, within B158DRAFT_1061 at 1103.130 kb on + strand, within B158DRAFT_1061 at 1103.130 kb on + strand, within B158DRAFT_1061 at 1103.130 kb on + strand, within B158DRAFT_1061 at 1103.138 kb on - strand, within B158DRAFT_1061 at 1103.138 kb on - strand, within B158DRAFT_1061 at 1103.138 kb on - strand, within B158DRAFT_1061 at 1103.216 kb on + strand at 1103.224 kb on - strand at 1103.253 kb on + strand at 1103.261 kb on - strand at 1103.264 kb on + strand at 1103.264 kb on + strand at 1103.264 kb on + strand at 1103.272 kb on + strand at 1103.272 kb on - strand at 1103.272 kb on - strand at 1103.272 kb on - strand at 1103.285 kb on - strand at 1103.306 kb on + strand at 1103.306 kb on + strand at 1103.314 kb on - strand at 1103.314 kb on - strand at 1103.338 kb on + strand at 1103.338 kb on + strand at 1103.346 kb on - strand at 1103.346 kb on - strand at 1103.346 kb on - strand at 1103.346 kb on - strand at 1103.454 kb on + strand, within B158DRAFT_1062 at 1103.459 kb on + strand, within B158DRAFT_1062 at 1103.462 kb on - strand, within B158DRAFT_1062 at 1103.462 kb on - strand, within B158DRAFT_1062 at 1103.462 kb on - strand, within B158DRAFT_1062 at 1103.476 kb on + strand, within B158DRAFT_1062 at 1103.476 kb on + strand, within B158DRAFT_1062 at 1103.484 kb on - strand, within B158DRAFT_1062 at 1103.484 kb on - strand, within B158DRAFT_1062 at 1103.517 kb on - strand, within B158DRAFT_1062 at 1103.519 kb on + strand, within B158DRAFT_1062 at 1103.539 kb on + strand, within B158DRAFT_1062 at 1103.565 kb on + strand, within B158DRAFT_1062 at 1103.573 kb on + strand, within B158DRAFT_1062 at 1103.610 kb on + strand, within B158DRAFT_1062 at 1103.674 kb on + strand, within B158DRAFT_1062 at 1103.690 kb on + strand, within B158DRAFT_1062 at 1103.690 kb on + strand, within B158DRAFT_1062 at 1103.690 kb on + strand, within B158DRAFT_1062 at 1103.698 kb on - strand, within B158DRAFT_1062 at 1103.698 kb on - strand, within B158DRAFT_1062 at 1103.702 kb on + strand, within B158DRAFT_1062 at 1103.702 kb on + strand, within B158DRAFT_1062 at 1103.710 kb on - strand, within B158DRAFT_1062 at 1103.716 kb on - strand, within B158DRAFT_1062 at 1103.770 kb on + strand, within B158DRAFT_1062 at 1103.770 kb on + strand, within B158DRAFT_1062 at 1103.770 kb on + strand, within B158DRAFT_1062 at 1103.770 kb on + strand, within B158DRAFT_1062 at 1103.778 kb on - strand, within B158DRAFT_1062 at 1103.859 kb on + strand, within B158DRAFT_1062 at 1103.883 kb on + strand, within B158DRAFT_1062 at 1103.883 kb on + strand, within B158DRAFT_1062 at 1103.891 kb on - strand, within B158DRAFT_1062 at 1103.905 kb on + strand, within B158DRAFT_1062 at 1103.906 kb on - strand, within B158DRAFT_1062 at 1103.935 kb on - strand, within B158DRAFT_1062 at 1103.953 kb on - strand, within B158DRAFT_1062 at 1103.999 kb on + strand at 1104.143 kb on - strand, within B158DRAFT_1063 at 1104.143 kb on - strand, within B158DRAFT_1063 at 1104.492 kb on + strand at 1104.523 kb on + strand at 1104.575 kb on - strand at 1104.575 kb on - strand at 1104.606 kb on + strand, within B158DRAFT_1064 at 1104.617 kb on - strand, within B158DRAFT_1064 at 1104.688 kb on - strand, within B158DRAFT_1064 at 1104.690 kb on + strand, within B158DRAFT_1064 at 1104.780 kb on + strand, within B158DRAFT_1064 at 1104.780 kb on + strand, within B158DRAFT_1064 at 1104.780 kb on + strand, within B158DRAFT_1064 at 1104.780 kb on + strand, within B158DRAFT_1064 at 1104.788 kb on - strand, within B158DRAFT_1064 at 1104.884 kb on + strand, within B158DRAFT_1064 at 1104.884 kb on + strand, within B158DRAFT_1064 at 1104.884 kb on + strand, within B158DRAFT_1064 at 1104.892 kb on - strand, within B158DRAFT_1064 at 1104.899 kb on + strand, within B158DRAFT_1064 at 1104.902 kb on - strand, within B158DRAFT_1064 at 1104.904 kb on + strand, within B158DRAFT_1064 at 1104.912 kb on - strand, within B158DRAFT_1064 at 1104.912 kb on - strand, within B158DRAFT_1064 at 1104.912 kb on - strand, within B158DRAFT_1064 at 1104.926 kb on - strand, within B158DRAFT_1064 at 1104.936 kb on + strand, within B158DRAFT_1064 at 1104.949 kb on + strand, within B158DRAFT_1064 at 1104.957 kb on - strand, within B158DRAFT_1064
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cephalothin 0.0049 mg/ml remove 1,102,387 - +10.7 1,102,492 + +0.9 1,102,492 + +1.3 1,102,500 - +0.4 1,102,500 - +0.2 1,102,500 - +0.4 1,102,528 + B158DRAFT_1061 0.10 +0.2 1,102,528 + B158DRAFT_1061 0.10 +0.1 1,102,544 + B158DRAFT_1061 0.12 +0.1 1,102,544 + B158DRAFT_1061 0.12 -0.3 1,102,552 - B158DRAFT_1061 0.13 -0.6 1,102,613 + B158DRAFT_1061 0.21 +0.2 1,102,620 + B158DRAFT_1061 0.22 -0.3 1,102,650 + B158DRAFT_1061 0.25 +0.7 1,102,655 + B158DRAFT_1061 0.26 -0.0 1,102,655 + B158DRAFT_1061 0.26 -0.7 1,102,655 + B158DRAFT_1061 0.26 -0.1 1,102,655 + B158DRAFT_1061 0.26 +0.2 1,102,655 + B158DRAFT_1061 0.26 -0.7 1,102,655 + B158DRAFT_1061 0.26 +0.3 1,102,655 + B158DRAFT_1061 0.26 -0.6 1,102,663 - B158DRAFT_1061 0.27 -0.1 1,102,663 - B158DRAFT_1061 0.27 +0.3 1,102,663 - B158DRAFT_1061 0.27 -0.0 1,102,663 - B158DRAFT_1061 0.27 +0.1 1,102,698 + B158DRAFT_1061 0.31 +0.1 1,102,763 - B158DRAFT_1061 0.40 +0.1 1,102,797 - B158DRAFT_1061 0.44 -0.5 1,102,815 - B158DRAFT_1061 0.46 +0.1 1,102,821 - B158DRAFT_1061 0.47 -1.6 1,102,860 + B158DRAFT_1061 0.52 -0.1 1,102,885 + B158DRAFT_1061 0.55 +0.4 1,102,886 - B158DRAFT_1061 0.55 -0.7 1,102,966 - B158DRAFT_1061 0.65 -0.5 1,102,972 - B158DRAFT_1061 0.66 -0.1 1,103,009 - B158DRAFT_1061 0.70 -0.1 1,103,034 + B158DRAFT_1061 0.73 -0.1 1,103,034 + B158DRAFT_1061 0.73 -0.7 1,103,034 + B158DRAFT_1061 0.73 -0.6 1,103,034 + B158DRAFT_1061 0.73 -0.2 1,103,042 - B158DRAFT_1061 0.74 +0.6 1,103,097 - B158DRAFT_1061 0.81 -0.4 1,103,115 + B158DRAFT_1061 0.84 +0.2 1,103,123 - B158DRAFT_1061 0.85 +0.1 1,103,123 - B158DRAFT_1061 0.85 +0.3 1,103,130 + B158DRAFT_1061 0.85 +0.3 1,103,130 + B158DRAFT_1061 0.85 -0.4 1,103,130 + B158DRAFT_1061 0.85 +0.4 1,103,138 - B158DRAFT_1061 0.86 -0.5 1,103,138 - B158DRAFT_1061 0.86 -0.3 1,103,138 - B158DRAFT_1061 0.86 +0.2 1,103,216 + -0.3 1,103,224 - -0.1 1,103,253 + -0.5 1,103,261 - +0.4 1,103,264 + +0.1 1,103,264 + -0.2 1,103,264 + +0.9 1,103,272 + +0.3 1,103,272 - +0.3 1,103,272 - +0.2 1,103,272 - -0.0 1,103,285 - +0.3 1,103,306 + -1.1 1,103,306 + -0.6 1,103,314 - +0.3 1,103,314 - +0.0 1,103,338 + -0.0 1,103,338 + -0.3 1,103,346 - +0.0 1,103,346 - +0.4 1,103,346 - -0.2 1,103,346 - +0.1 1,103,454 + B158DRAFT_1062 0.17 +0.2 1,103,459 + B158DRAFT_1062 0.17 -0.1 1,103,462 - B158DRAFT_1062 0.18 +1.2 1,103,462 - B158DRAFT_1062 0.18 -0.2 1,103,462 - B158DRAFT_1062 0.18 +0.4 1,103,476 + B158DRAFT_1062 0.20 +0.0 1,103,476 + B158DRAFT_1062 0.20 -0.5 1,103,484 - B158DRAFT_1062 0.21 +0.8 1,103,484 - B158DRAFT_1062 0.21 +0.3 1,103,517 - B158DRAFT_1062 0.25 -0.1 1,103,519 + B158DRAFT_1062 0.26 -0.4 1,103,539 + B158DRAFT_1062 0.28 -0.2 1,103,565 + B158DRAFT_1062 0.32 +0.1 1,103,573 + B158DRAFT_1062 0.33 -0.2 1,103,610 + B158DRAFT_1062 0.38 -0.2 1,103,674 + B158DRAFT_1062 0.47 +0.7 1,103,690 + B158DRAFT_1062 0.49 +0.4 1,103,690 + B158DRAFT_1062 0.49 +0.7 1,103,690 + B158DRAFT_1062 0.49 -0.9 1,103,698 - B158DRAFT_1062 0.51 +0.2 1,103,698 - B158DRAFT_1062 0.51 -0.2 1,103,702 + B158DRAFT_1062 0.51 +0.4 1,103,702 + B158DRAFT_1062 0.51 +0.1 1,103,710 - B158DRAFT_1062 0.52 -1.9 1,103,716 - B158DRAFT_1062 0.53 -0.4 1,103,770 + B158DRAFT_1062 0.61 +0.1 1,103,770 + B158DRAFT_1062 0.61 +0.6 1,103,770 + B158DRAFT_1062 0.61 -0.7 1,103,770 + B158DRAFT_1062 0.61 +0.5 1,103,778 - B158DRAFT_1062 0.62 -0.1 1,103,859 + B158DRAFT_1062 0.73 +0.4 1,103,883 + B158DRAFT_1062 0.76 -0.1 1,103,883 + B158DRAFT_1062 0.76 -0.3 1,103,891 - B158DRAFT_1062 0.77 -0.7 1,103,905 + B158DRAFT_1062 0.79 -0.8 1,103,906 - B158DRAFT_1062 0.79 -1.1 1,103,935 - B158DRAFT_1062 0.83 -0.9 1,103,953 - B158DRAFT_1062 0.86 -1.3 1,103,999 + -1.4 1,104,143 - B158DRAFT_1063 0.17 -1.9 1,104,143 - B158DRAFT_1063 0.17 -1.9 1,104,492 + -0.2 1,104,523 + +0.2 1,104,575 - +1.9 1,104,575 - +0.6 1,104,606 + B158DRAFT_1064 0.10 +0.4 1,104,617 - B158DRAFT_1064 0.12 -0.1 1,104,688 - B158DRAFT_1064 0.22 -0.6 1,104,690 + B158DRAFT_1064 0.22 +0.3 1,104,780 + B158DRAFT_1064 0.35 +5.3 1,104,780 + B158DRAFT_1064 0.35 -0.5 1,104,780 + B158DRAFT_1064 0.35 -0.6 1,104,780 + B158DRAFT_1064 0.35 +1.0 1,104,788 - B158DRAFT_1064 0.36 -0.1 1,104,884 + B158DRAFT_1064 0.50 +0.4 1,104,884 + B158DRAFT_1064 0.50 -1.1 1,104,884 + B158DRAFT_1064 0.50 +3.6 1,104,892 - B158DRAFT_1064 0.51 -0.2 1,104,899 + B158DRAFT_1064 0.52 +5.1 1,104,902 - B158DRAFT_1064 0.53 +5.1 1,104,904 + B158DRAFT_1064 0.53 +0.5 1,104,912 - B158DRAFT_1064 0.54 +1.4 1,104,912 - B158DRAFT_1064 0.54 -1.1 1,104,912 - B158DRAFT_1064 0.54 -0.2 1,104,926 - B158DRAFT_1064 0.56 +0.3 1,104,936 + B158DRAFT_1064 0.57 +0.3 1,104,949 + B158DRAFT_1064 0.59 +4.7 1,104,957 - B158DRAFT_1064 0.60 +7.6
Or see this region's nucleotide sequence