Experiment: m.b. Cephalothin 0.0049 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0478 and B158DRAFT_0479 are separated by 347 nucleotides B158DRAFT_0479 and B158DRAFT_0480 are separated by 55 nucleotides B158DRAFT_0480 and B158DRAFT_0481 are separated by 15 nucleotides
B158DRAFT_0478: B158DRAFT_0478 - Imidazolonepropionase and related amidohydrolases, at 478,978 to 482,184
_0478
B158DRAFT_0479: B158DRAFT_0479 - CAAX amino terminal protease family., at 482,532 to 483,248
_0479
B158DRAFT_0480: B158DRAFT_0480 - hypothetical protein, at 483,304 to 483,552
_0480
B158DRAFT_0481: B158DRAFT_0481 - SseB protein., at 483,568 to 484,395
_0481
Position (kb) 482
483
484 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4
5
6
7 at 481.604 kb on - strand, within B158DRAFT_0478 at 481.687 kb on - strand, within B158DRAFT_0478 at 481.695 kb on + strand, within B158DRAFT_0478 at 481.703 kb on - strand, within B158DRAFT_0478 at 481.703 kb on - strand, within B158DRAFT_0478 at 481.739 kb on - strand, within B158DRAFT_0478 at 481.739 kb on - strand, within B158DRAFT_0478 at 481.741 kb on - strand, within B158DRAFT_0478 at 481.766 kb on - strand, within B158DRAFT_0478 at 481.814 kb on - strand, within B158DRAFT_0478 at 481.844 kb on + strand, within B158DRAFT_0478 at 481.854 kb on + strand, within B158DRAFT_0478 at 481.854 kb on + strand, within B158DRAFT_0478 at 481.854 kb on + strand, within B158DRAFT_0478 at 481.854 kb on + strand, within B158DRAFT_0478 at 481.861 kb on + strand, within B158DRAFT_0478 at 481.862 kb on - strand, within B158DRAFT_0478 at 481.921 kb on - strand at 481.951 kb on + strand at 481.959 kb on - strand at 481.961 kb on + strand at 481.961 kb on + strand at 482.013 kb on + strand at 482.021 kb on - strand at 482.036 kb on + strand at 482.076 kb on - strand at 482.080 kb on + strand at 482.088 kb on - strand at 482.088 kb on - strand at 482.096 kb on + strand at 482.096 kb on + strand at 482.096 kb on + strand at 482.096 kb on + strand at 482.098 kb on - strand at 482.104 kb on - strand at 482.109 kb on - strand at 482.123 kb on + strand at 482.138 kb on - strand at 482.146 kb on - strand at 482.413 kb on + strand at 482.421 kb on - strand at 482.442 kb on + strand at 482.443 kb on - strand at 482.443 kb on - strand at 482.443 kb on - strand at 482.450 kb on - strand at 482.450 kb on - strand at 482.490 kb on - strand at 482.490 kb on - strand at 482.530 kb on + strand at 482.539 kb on - strand at 482.553 kb on - strand at 482.617 kb on + strand, within B158DRAFT_0479 at 482.624 kb on - strand, within B158DRAFT_0479 at 482.624 kb on - strand, within B158DRAFT_0479 at 482.625 kb on - strand, within B158DRAFT_0479 at 482.625 kb on - strand, within B158DRAFT_0479 at 482.625 kb on - strand, within B158DRAFT_0479 at 482.650 kb on - strand, within B158DRAFT_0479 at 482.677 kb on - strand, within B158DRAFT_0479 at 482.952 kb on + strand, within B158DRAFT_0479 at 483.077 kb on - strand, within B158DRAFT_0479 at 483.186 kb on + strand at 483.218 kb on - strand at 483.231 kb on - strand at 483.232 kb on - strand at 483.249 kb on - strand at 483.258 kb on + strand at 483.346 kb on + strand, within B158DRAFT_0480 at 483.346 kb on + strand, within B158DRAFT_0480 at 483.347 kb on + strand, within B158DRAFT_0480 at 483.347 kb on + strand, within B158DRAFT_0480 at 483.347 kb on + strand, within B158DRAFT_0480 at 483.355 kb on - strand, within B158DRAFT_0480 at 483.355 kb on - strand, within B158DRAFT_0480 at 483.355 kb on - strand, within B158DRAFT_0480 at 483.355 kb on - strand, within B158DRAFT_0480 at 483.355 kb on - strand, within B158DRAFT_0480 at 483.357 kb on + strand, within B158DRAFT_0480 at 483.359 kb on + strand, within B158DRAFT_0480 at 483.359 kb on + strand, within B158DRAFT_0480 at 483.359 kb on + strand, within B158DRAFT_0480 at 483.359 kb on + strand, within B158DRAFT_0480 at 483.359 kb on + strand, within B158DRAFT_0480 at 483.364 kb on + strand, within B158DRAFT_0480 at 483.364 kb on + strand, within B158DRAFT_0480 at 483.364 kb on + strand, within B158DRAFT_0480 at 483.365 kb on - strand, within B158DRAFT_0480 at 483.367 kb on - strand, within B158DRAFT_0480 at 483.372 kb on - strand, within B158DRAFT_0480 at 483.382 kb on - strand, within B158DRAFT_0480 at 483.382 kb on - strand, within B158DRAFT_0480 at 483.449 kb on + strand, within B158DRAFT_0480 at 483.455 kb on - strand, within B158DRAFT_0480 at 483.457 kb on - strand, within B158DRAFT_0480 at 483.540 kb on + strand at 483.550 kb on - strand at 483.550 kb on - strand at 483.556 kb on - strand at 483.556 kb on - strand at 483.557 kb on - strand at 483.617 kb on - strand at 483.634 kb on + strand at 483.634 kb on + strand at 483.634 kb on + strand at 483.634 kb on + strand at 483.635 kb on + strand at 483.642 kb on - strand at 483.642 kb on - strand at 483.642 kb on - strand at 483.642 kb on - strand at 483.642 kb on - strand at 483.642 kb on - strand at 483.642 kb on - strand at 483.642 kb on - strand at 483.643 kb on - strand at 483.666 kb on - strand, within B158DRAFT_0481 at 483.802 kb on + strand, within B158DRAFT_0481 at 483.802 kb on - strand, within B158DRAFT_0481 at 483.843 kb on + strand, within B158DRAFT_0481 at 483.843 kb on + strand, within B158DRAFT_0481 at 483.843 kb on + strand, within B158DRAFT_0481 at 483.851 kb on - strand, within B158DRAFT_0481 at 483.851 kb on - strand, within B158DRAFT_0481 at 483.851 kb on - strand, within B158DRAFT_0481 at 483.859 kb on - strand, within B158DRAFT_0481 at 484.035 kb on + strand, within B158DRAFT_0481 at 484.035 kb on + strand, within B158DRAFT_0481 at 484.035 kb on + strand, within B158DRAFT_0481 at 484.035 kb on + strand, within B158DRAFT_0481 at 484.035 kb on + strand, within B158DRAFT_0481 at 484.043 kb on - strand, within B158DRAFT_0481 at 484.043 kb on - strand, within B158DRAFT_0481 at 484.043 kb on - strand, within B158DRAFT_0481 at 484.043 kb on - strand, within B158DRAFT_0481 at 484.043 kb on - strand, within B158DRAFT_0481 at 484.043 kb on - strand, within B158DRAFT_0481 at 484.107 kb on + strand, within B158DRAFT_0481 at 484.107 kb on + strand, within B158DRAFT_0481 at 484.115 kb on - strand, within B158DRAFT_0481 at 484.115 kb on - strand, within B158DRAFT_0481 at 484.173 kb on + strand, within B158DRAFT_0481 at 484.173 kb on + strand, within B158DRAFT_0481 at 484.173 kb on + strand, within B158DRAFT_0481 at 484.173 kb on + strand, within B158DRAFT_0481 at 484.173 kb on + strand, within B158DRAFT_0481 at 484.181 kb on - strand, within B158DRAFT_0481 at 484.181 kb on - strand, within B158DRAFT_0481 at 484.202 kb on - strand, within B158DRAFT_0481 at 484.226 kb on + strand, within B158DRAFT_0481 at 484.226 kb on + strand, within B158DRAFT_0481 at 484.226 kb on + strand, within B158DRAFT_0481 at 484.234 kb on - strand, within B158DRAFT_0481 at 484.236 kb on + strand, within B158DRAFT_0481
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cephalothin 0.0049 mg/ml remove 481,604 - B158DRAFT_0478 0.82 -0.1 481,687 - B158DRAFT_0478 0.84 -0.8 481,695 + B158DRAFT_0478 0.85 -0.4 481,703 - B158DRAFT_0478 0.85 +0.0 481,703 - B158DRAFT_0478 0.85 -0.2 481,739 - B158DRAFT_0478 0.86 -1.9 481,739 - B158DRAFT_0478 0.86 +0.0 481,741 - B158DRAFT_0478 0.86 -0.0 481,766 - B158DRAFT_0478 0.87 -0.5 481,814 - B158DRAFT_0478 0.88 +0.3 481,844 + B158DRAFT_0478 0.89 +0.3 481,854 + B158DRAFT_0478 0.90 -0.3 481,854 + B158DRAFT_0478 0.90 -0.1 481,854 + B158DRAFT_0478 0.90 -0.2 481,854 + B158DRAFT_0478 0.90 +0.0 481,861 + B158DRAFT_0478 0.90 +0.0 481,862 - B158DRAFT_0478 0.90 +0.1 481,921 - +0.0 481,951 + -0.3 481,959 - +0.3 481,961 + -0.3 481,961 + +0.1 482,013 + +0.3 482,021 - +0.4 482,036 + +0.4 482,076 - -2.0 482,080 + -1.2 482,088 - -0.2 482,088 - -0.2 482,096 + -0.4 482,096 + +0.6 482,096 + -0.8 482,096 + +1.1 482,098 - +0.1 482,104 - -0.0 482,109 - -0.3 482,123 + +0.4 482,138 - -0.3 482,146 - -0.4 482,413 + -0.6 482,421 - -0.2 482,442 + +0.6 482,443 - +0.6 482,443 - +7.2 482,443 - -0.4 482,450 - -0.6 482,450 - -2.0 482,490 - +0.1 482,490 - -0.3 482,530 + -0.4 482,539 - +0.5 482,553 - -0.0 482,617 + B158DRAFT_0479 0.12 -1.1 482,624 - B158DRAFT_0479 0.13 -0.3 482,624 - B158DRAFT_0479 0.13 -0.3 482,625 - B158DRAFT_0479 0.13 -0.0 482,625 - B158DRAFT_0479 0.13 +1.1 482,625 - B158DRAFT_0479 0.13 +0.3 482,650 - B158DRAFT_0479 0.16 +0.8 482,677 - B158DRAFT_0479 0.20 +0.1 482,952 + B158DRAFT_0479 0.59 +0.6 483,077 - B158DRAFT_0479 0.76 +0.4 483,186 + +0.3 483,218 - +0.9 483,231 - -0.1 483,232 - -0.6 483,249 - -0.2 483,258 + -0.7 483,346 + B158DRAFT_0480 0.17 -0.3 483,346 + B158DRAFT_0480 0.17 -0.2 483,347 + B158DRAFT_0480 0.17 +0.3 483,347 + B158DRAFT_0480 0.17 -0.4 483,347 + B158DRAFT_0480 0.17 -0.6 483,355 - B158DRAFT_0480 0.20 -0.9 483,355 - B158DRAFT_0480 0.20 -0.5 483,355 - B158DRAFT_0480 0.20 -0.3 483,355 - B158DRAFT_0480 0.20 +0.5 483,355 - B158DRAFT_0480 0.20 -0.0 483,357 + B158DRAFT_0480 0.21 -0.7 483,359 + B158DRAFT_0480 0.22 -0.8 483,359 + B158DRAFT_0480 0.22 +0.3 483,359 + B158DRAFT_0480 0.22 -0.5 483,359 + B158DRAFT_0480 0.22 -0.2 483,359 + B158DRAFT_0480 0.22 -0.3 483,364 + B158DRAFT_0480 0.24 +0.1 483,364 + B158DRAFT_0480 0.24 -0.3 483,364 + B158DRAFT_0480 0.24 +1.5 483,365 - B158DRAFT_0480 0.24 +0.1 483,367 - B158DRAFT_0480 0.25 -0.9 483,372 - B158DRAFT_0480 0.27 -0.4 483,382 - B158DRAFT_0480 0.31 -0.9 483,382 - B158DRAFT_0480 0.31 +0.0 483,449 + B158DRAFT_0480 0.58 +0.1 483,455 - B158DRAFT_0480 0.61 +0.4 483,457 - B158DRAFT_0480 0.61 +0.1 483,540 + -0.0 483,550 - -0.4 483,550 - +0.1 483,556 - +0.2 483,556 - -0.2 483,557 - -0.3 483,617 - -1.5 483,634 + -0.4 483,634 + +0.4 483,634 + -0.1 483,634 + -0.1 483,635 + -0.4 483,642 - -0.3 483,642 - -0.2 483,642 - -0.4 483,642 - +0.2 483,642 - -0.2 483,642 - -1.0 483,642 - +0.9 483,642 - -0.5 483,643 - +0.2 483,666 - B158DRAFT_0481 0.12 -0.4 483,802 + B158DRAFT_0481 0.28 +0.3 483,802 - B158DRAFT_0481 0.28 -0.2 483,843 + B158DRAFT_0481 0.33 -0.2 483,843 + B158DRAFT_0481 0.33 -0.0 483,843 + B158DRAFT_0481 0.33 -0.3 483,851 - B158DRAFT_0481 0.34 +0.2 483,851 - B158DRAFT_0481 0.34 +1.3 483,851 - B158DRAFT_0481 0.34 -0.3 483,859 - B158DRAFT_0481 0.35 +0.1 484,035 + B158DRAFT_0481 0.56 +2.3 484,035 + B158DRAFT_0481 0.56 +0.5 484,035 + B158DRAFT_0481 0.56 -0.1 484,035 + B158DRAFT_0481 0.56 -1.1 484,035 + B158DRAFT_0481 0.56 +0.1 484,043 - B158DRAFT_0481 0.57 -0.8 484,043 - B158DRAFT_0481 0.57 -0.3 484,043 - B158DRAFT_0481 0.57 -0.7 484,043 - B158DRAFT_0481 0.57 +0.6 484,043 - B158DRAFT_0481 0.57 +0.2 484,043 - B158DRAFT_0481 0.57 -0.5 484,107 + B158DRAFT_0481 0.65 +0.4 484,107 + B158DRAFT_0481 0.65 +0.2 484,115 - B158DRAFT_0481 0.66 -0.0 484,115 - B158DRAFT_0481 0.66 +0.3 484,173 + B158DRAFT_0481 0.73 -0.7 484,173 + B158DRAFT_0481 0.73 +0.0 484,173 + B158DRAFT_0481 0.73 +0.3 484,173 + B158DRAFT_0481 0.73 -0.1 484,173 + B158DRAFT_0481 0.73 -0.0 484,181 - B158DRAFT_0481 0.74 +0.5 484,181 - B158DRAFT_0481 0.74 -0.4 484,202 - B158DRAFT_0481 0.77 +0.2 484,226 + B158DRAFT_0481 0.79 +0.2 484,226 + B158DRAFT_0481 0.79 +0.3 484,226 + B158DRAFT_0481 0.79 -0.3 484,234 - B158DRAFT_0481 0.80 -0.6 484,236 + B158DRAFT_0481 0.81 -0.3
Or see this region's nucleotide sequence