Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0213

Experiment: m.b. Cephalothin 0.0049 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0212 and B158DRAFT_0213 are separated by 389 nucleotidesB158DRAFT_0213 and B158DRAFT_0214 overlap by 4 nucleotidesB158DRAFT_0214 and B158DRAFT_0215 are separated by 8 nucleotidesB158DRAFT_0215 and B158DRAFT_0216 are separated by 111 nucleotides B158DRAFT_0212: B158DRAFT_0212 - Phage DNA packaging protein, Nu1 subunit of terminase, at 218,118 to 218,579 _0212 B158DRAFT_0213: B158DRAFT_0213 - hypothetical protein, at 218,969 to 220,672 _0213 B158DRAFT_0214: B158DRAFT_0214 - hypothetical protein, at 220,669 to 220,944 _0214 B158DRAFT_0215: B158DRAFT_0215 - hypothetical protein, at 220,953 to 221,252 _0215 B158DRAFT_0216: B158DRAFT_0216 - hypothetical protein, at 221,364 to 222,065 _0216 Position (kb) 218 219 220 221Strain fitness (log2 ratio) -2 -1 0 1at 218.047 kb on + strandat 218.095 kb on + strandat 218.150 kb on - strandat 218.202 kb on - strand, within B158DRAFT_0212at 218.311 kb on + strand, within B158DRAFT_0212at 218.369 kb on + strand, within B158DRAFT_0212at 218.393 kb on + strand, within B158DRAFT_0212at 218.500 kb on - strand, within B158DRAFT_0212at 218.638 kb on + strandat 218.654 kb on - strandat 218.654 kb on - strandat 218.662 kb on - strandat 218.662 kb on - strandat 218.671 kb on - strandat 218.672 kb on + strandat 218.672 kb on + strandat 218.680 kb on - strandat 218.680 kb on - strandat 218.702 kb on + strandat 218.708 kb on + strandat 218.708 kb on + strandat 218.716 kb on - strandat 218.716 kb on - strandat 218.730 kb on + strandat 218.760 kb on - strandat 218.788 kb on - strandat 218.798 kb on - strandat 218.798 kb on - strandat 218.971 kb on + strandat 218.974 kb on - strandat 219.000 kb on - strandat 219.033 kb on + strandat 219.044 kb on - strandat 219.045 kb on - strandat 219.047 kb on + strandat 219.082 kb on - strandat 219.087 kb on - strandat 219.133 kb on + strandat 219.133 kb on + strandat 219.133 kb on + strandat 219.133 kb on + strandat 219.133 kb on + strandat 219.133 kb on + strandat 219.133 kb on + strandat 219.133 kb on + strandat 219.141 kb on - strand, within B158DRAFT_0213at 219.141 kb on - strand, within B158DRAFT_0213at 219.141 kb on - strand, within B158DRAFT_0213at 219.141 kb on - strand, within B158DRAFT_0213at 219.143 kb on + strand, within B158DRAFT_0213at 219.143 kb on + strand, within B158DRAFT_0213at 219.143 kb on + strand, within B158DRAFT_0213at 219.168 kb on + strand, within B158DRAFT_0213at 219.168 kb on + strand, within B158DRAFT_0213at 219.176 kb on - strand, within B158DRAFT_0213at 219.176 kb on - strand, within B158DRAFT_0213at 219.176 kb on - strand, within B158DRAFT_0213at 219.176 kb on - strand, within B158DRAFT_0213at 219.176 kb on - strand, within B158DRAFT_0213at 219.176 kb on - strand, within B158DRAFT_0213at 219.176 kb on - strand, within B158DRAFT_0213at 219.176 kb on - strand, within B158DRAFT_0213at 219.370 kb on + strand, within B158DRAFT_0213at 219.411 kb on + strand, within B158DRAFT_0213at 219.419 kb on - strand, within B158DRAFT_0213at 219.477 kb on + strand, within B158DRAFT_0213at 219.479 kb on + strand, within B158DRAFT_0213at 219.487 kb on - strand, within B158DRAFT_0213at 219.487 kb on - strand, within B158DRAFT_0213at 219.534 kb on + strand, within B158DRAFT_0213at 219.534 kb on + strand, within B158DRAFT_0213at 219.537 kb on - strand, within B158DRAFT_0213at 219.542 kb on - strand, within B158DRAFT_0213at 219.542 kb on - strand, within B158DRAFT_0213at 219.557 kb on - strand, within B158DRAFT_0213at 219.614 kb on - strand, within B158DRAFT_0213at 219.721 kb on - strand, within B158DRAFT_0213at 219.802 kb on + strand, within B158DRAFT_0213at 219.853 kb on - strand, within B158DRAFT_0213at 219.880 kb on - strand, within B158DRAFT_0213at 220.056 kb on - strand, within B158DRAFT_0213at 220.268 kb on - strand, within B158DRAFT_0213at 220.379 kb on + strand, within B158DRAFT_0213at 220.410 kb on + strand, within B158DRAFT_0213at 220.418 kb on - strand, within B158DRAFT_0213at 220.425 kb on - strand, within B158DRAFT_0213at 220.541 kb on + strandat 220.548 kb on + strandat 220.549 kb on - strandat 220.579 kb on - strandat 220.814 kb on - strand, within B158DRAFT_0214at 220.851 kb on - strand, within B158DRAFT_0214at 220.851 kb on - strand, within B158DRAFT_0214at 220.853 kb on + strand, within B158DRAFT_0214at 220.991 kb on - strand, within B158DRAFT_0215at 221.049 kb on - strand, within B158DRAFT_0215at 221.049 kb on - strand, within B158DRAFT_0215at 221.134 kb on + strand, within B158DRAFT_0215at 221.180 kb on + strand, within B158DRAFT_0215at 221.285 kb on - strandat 221.315 kb on + strandat 221.414 kb on - strandat 221.467 kb on - strand, within B158DRAFT_0216at 221.561 kb on - strand, within B158DRAFT_0216at 221.608 kb on + strand, within B158DRAFT_0216

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cephalothin 0.0049 mg/ml
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218,047 + -0.3
218,095 + -0.1
218,150 - +0.0
218,202 - B158DRAFT_0212 0.18 +0.3
218,311 + B158DRAFT_0212 0.42 -0.3
218,369 + B158DRAFT_0212 0.54 -0.1
218,393 + B158DRAFT_0212 0.60 -0.8
218,500 - B158DRAFT_0212 0.83 -0.1
218,638 + -0.2
218,654 - -0.2
218,654 - -0.1
218,662 - -0.2
218,662 - -0.2
218,671 - -1.6
218,672 + -0.3
218,672 + +0.6
218,680 - +0.5
218,680 - -0.4
218,702 + +0.0
218,708 + -0.8
218,708 + -0.2
218,716 - -0.3
218,716 - +0.1
218,730 + -0.4
218,760 - -1.0
218,788 - -0.1
218,798 - +0.8
218,798 - -1.0
218,971 + +0.2
218,974 - -0.1
219,000 - -0.9
219,033 + +0.1
219,044 - -0.3
219,045 - -1.8
219,047 + -1.3
219,082 - -1.1
219,087 - -0.1
219,133 + +0.1
219,133 + -0.1
219,133 + -0.4
219,133 + -0.2
219,133 + -0.4
219,133 + -1.1
219,133 + -0.5
219,133 + +0.1
219,141 - B158DRAFT_0213 0.10 +0.6
219,141 - B158DRAFT_0213 0.10 -0.5
219,141 - B158DRAFT_0213 0.10 -1.4
219,141 - B158DRAFT_0213 0.10 -1.1
219,143 + B158DRAFT_0213 0.10 -0.6
219,143 + B158DRAFT_0213 0.10 -0.3
219,143 + B158DRAFT_0213 0.10 +0.0
219,168 + B158DRAFT_0213 0.12 -0.5
219,168 + B158DRAFT_0213 0.12 +0.6
219,176 - B158DRAFT_0213 0.12 -0.4
219,176 - B158DRAFT_0213 0.12 -0.9
219,176 - B158DRAFT_0213 0.12 +0.0
219,176 - B158DRAFT_0213 0.12 +0.1
219,176 - B158DRAFT_0213 0.12 -0.5
219,176 - B158DRAFT_0213 0.12 -0.3
219,176 - B158DRAFT_0213 0.12 -0.4
219,176 - B158DRAFT_0213 0.12 +0.1
219,370 + B158DRAFT_0213 0.24 -0.4
219,411 + B158DRAFT_0213 0.26 -1.0
219,419 - B158DRAFT_0213 0.26 +0.1
219,477 + B158DRAFT_0213 0.30 +0.1
219,479 + B158DRAFT_0213 0.30 -1.5
219,487 - B158DRAFT_0213 0.30 +0.0
219,487 - B158DRAFT_0213 0.30 -0.4
219,534 + B158DRAFT_0213 0.33 -0.2
219,534 + B158DRAFT_0213 0.33 +0.1
219,537 - B158DRAFT_0213 0.33 -0.5
219,542 - B158DRAFT_0213 0.34 -0.1
219,542 - B158DRAFT_0213 0.34 +0.5
219,557 - B158DRAFT_0213 0.35 -0.4
219,614 - B158DRAFT_0213 0.38 +0.2
219,721 - B158DRAFT_0213 0.44 -0.0
219,802 + B158DRAFT_0213 0.49 +0.2
219,853 - B158DRAFT_0213 0.52 -0.9
219,880 - B158DRAFT_0213 0.53 -0.5
220,056 - B158DRAFT_0213 0.64 -0.1
220,268 - B158DRAFT_0213 0.76 -0.1
220,379 + B158DRAFT_0213 0.83 -0.8
220,410 + B158DRAFT_0213 0.85 -0.8
220,418 - B158DRAFT_0213 0.85 -0.0
220,425 - B158DRAFT_0213 0.85 -0.4
220,541 + +0.0
220,548 + -0.8
220,549 - +0.4
220,579 - -0.2
220,814 - B158DRAFT_0214 0.53 +0.2
220,851 - B158DRAFT_0214 0.66 -0.4
220,851 - B158DRAFT_0214 0.66 -0.1
220,853 + B158DRAFT_0214 0.67 +0.8
220,991 - B158DRAFT_0215 0.13 -1.4
221,049 - B158DRAFT_0215 0.32 -1.0
221,049 - B158DRAFT_0215 0.32 -0.3
221,134 + B158DRAFT_0215 0.60 +0.0
221,180 + B158DRAFT_0215 0.76 -0.2
221,285 - -0.9
221,315 + -0.1
221,414 - -0.2
221,467 - B158DRAFT_0216 0.15 +0.5
221,561 - B158DRAFT_0216 0.28 -0.4
221,608 + B158DRAFT_0216 0.35 -0.0

Or see this region's nucleotide sequence