Experiment: m.b. Cephalothin 0.0049 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0068 and B158DRAFT_0069 are separated by 17 nucleotides B158DRAFT_0069 and B158DRAFT_0070 are separated by 129 nucleotides B158DRAFT_0070 and B158DRAFT_0071 are separated by 75 nucleotides B158DRAFT_0071 and B158DRAFT_0072 are separated by 186 nucleotides
B158DRAFT_0068: B158DRAFT_0068 - Putative threonine efflux protein, at 65,725 to 66,372
_0068
B158DRAFT_0069: B158DRAFT_0069 - Uncharacterized membrane-associated protein, at 66,390 to 67,151
_0069
B158DRAFT_0070: B158DRAFT_0070 - hypothetical protein, at 67,281 to 67,727
_0070
B158DRAFT_0071: B158DRAFT_0071 - hypothetical protein, at 67,803 to 68,372
_0071
B158DRAFT_0072: B158DRAFT_0072 - Peptidase family M48., at 68,559 to 69,359
_0072
Position (kb) 67
68 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6
7 at 66.425 kb on - strand at 66.524 kb on + strand, within B158DRAFT_0069 at 66.529 kb on + strand, within B158DRAFT_0069 at 66.599 kb on + strand, within B158DRAFT_0069 at 66.609 kb on + strand, within B158DRAFT_0069 at 66.615 kb on - strand, within B158DRAFT_0069 at 66.619 kb on + strand, within B158DRAFT_0069 at 66.627 kb on - strand, within B158DRAFT_0069 at 66.642 kb on + strand, within B158DRAFT_0069 at 66.655 kb on - strand, within B158DRAFT_0069 at 66.655 kb on - strand, within B158DRAFT_0069 at 66.689 kb on - strand, within B158DRAFT_0069 at 66.749 kb on - strand, within B158DRAFT_0069 at 66.749 kb on - strand, within B158DRAFT_0069 at 66.836 kb on + strand, within B158DRAFT_0069 at 66.842 kb on - strand, within B158DRAFT_0069 at 66.922 kb on + strand, within B158DRAFT_0069 at 66.930 kb on - strand, within B158DRAFT_0069 at 66.995 kb on + strand, within B158DRAFT_0069 at 67.037 kb on + strand, within B158DRAFT_0069 at 67.045 kb on - strand, within B158DRAFT_0069 at 67.045 kb on - strand, within B158DRAFT_0069 at 67.080 kb on + strand at 67.100 kb on + strand at 67.100 kb on + strand at 67.207 kb on - strand at 67.209 kb on + strand at 67.278 kb on + strand at 67.283 kb on + strand at 67.283 kb on + strand at 67.286 kb on - strand at 67.286 kb on - strand at 67.286 kb on - strand at 67.288 kb on + strand at 67.355 kb on - strand, within B158DRAFT_0070 at 67.554 kb on + strand, within B158DRAFT_0070 at 67.582 kb on - strand, within B158DRAFT_0070 at 67.614 kb on + strand, within B158DRAFT_0070 at 67.638 kb on + strand, within B158DRAFT_0070 at 67.643 kb on + strand, within B158DRAFT_0070 at 67.648 kb on + strand, within B158DRAFT_0070 at 67.648 kb on + strand, within B158DRAFT_0070 at 67.648 kb on + strand, within B158DRAFT_0070 at 67.649 kb on - strand, within B158DRAFT_0070 at 67.651 kb on - strand, within B158DRAFT_0070 at 67.722 kb on + strand at 67.800 kb on + strand at 67.901 kb on - strand, within B158DRAFT_0071 at 67.939 kb on + strand, within B158DRAFT_0071 at 67.939 kb on + strand, within B158DRAFT_0071 at 67.939 kb on + strand, within B158DRAFT_0071 at 67.947 kb on - strand, within B158DRAFT_0071 at 67.947 kb on - strand, within B158DRAFT_0071 at 67.947 kb on - strand, within B158DRAFT_0071 at 67.947 kb on - strand, within B158DRAFT_0071 at 67.985 kb on - strand, within B158DRAFT_0071 at 68.047 kb on - strand, within B158DRAFT_0071 at 68.052 kb on + strand, within B158DRAFT_0071 at 68.317 kb on - strand at 68.324 kb on + strand at 68.324 kb on + strand at 68.348 kb on + strand at 68.387 kb on - strand at 68.483 kb on + strand at 68.491 kb on - strand at 68.595 kb on + strand at 68.595 kb on + strand at 68.603 kb on - strand at 68.603 kb on - strand at 68.603 kb on - strand at 68.603 kb on - strand at 68.603 kb on - strand at 68.623 kb on + strand at 68.674 kb on + strand, within B158DRAFT_0072 at 68.682 kb on - strand, within B158DRAFT_0072 at 68.726 kb on - strand, within B158DRAFT_0072
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cephalothin 0.0049 mg/ml remove 66,425 - -0.5 66,524 + B158DRAFT_0069 0.18 +0.1 66,529 + B158DRAFT_0069 0.18 -1.0 66,599 + B158DRAFT_0069 0.27 -0.5 66,609 + B158DRAFT_0069 0.29 -0.8 66,615 - B158DRAFT_0069 0.30 -1.4 66,619 + B158DRAFT_0069 0.30 -1.1 66,627 - B158DRAFT_0069 0.31 -0.0 66,642 + B158DRAFT_0069 0.33 -0.4 66,655 - B158DRAFT_0069 0.35 +0.2 66,655 - B158DRAFT_0069 0.35 -0.5 66,689 - B158DRAFT_0069 0.39 -0.1 66,749 - B158DRAFT_0069 0.47 +0.4 66,749 - B158DRAFT_0069 0.47 +0.1 66,836 + B158DRAFT_0069 0.59 -0.3 66,842 - B158DRAFT_0069 0.59 -0.1 66,922 + B158DRAFT_0069 0.70 -0.5 66,930 - B158DRAFT_0069 0.71 -0.6 66,995 + B158DRAFT_0069 0.79 -0.3 67,037 + B158DRAFT_0069 0.85 -3.1 67,045 - B158DRAFT_0069 0.86 -0.6 67,045 - B158DRAFT_0069 0.86 -0.1 67,080 + -0.3 67,100 + -0.0 67,100 + -0.3 67,207 - -0.0 67,209 + -0.3 67,278 + -0.1 67,283 + -1.9 67,283 + -0.3 67,286 - -0.1 67,286 - -0.5 67,286 - -0.1 67,288 + -0.4 67,355 - B158DRAFT_0070 0.17 -0.3 67,554 + B158DRAFT_0070 0.61 -0.2 67,582 - B158DRAFT_0070 0.67 -0.4 67,614 + B158DRAFT_0070 0.74 -0.1 67,638 + B158DRAFT_0070 0.80 -0.2 67,643 + B158DRAFT_0070 0.81 +0.3 67,648 + B158DRAFT_0070 0.82 -0.2 67,648 + B158DRAFT_0070 0.82 +0.5 67,648 + B158DRAFT_0070 0.82 -0.5 67,649 - B158DRAFT_0070 0.82 -0.4 67,651 - B158DRAFT_0070 0.83 +0.0 67,722 + -0.1 67,800 + +0.1 67,901 - B158DRAFT_0071 0.17 -0.3 67,939 + B158DRAFT_0071 0.24 -0.0 67,939 + B158DRAFT_0071 0.24 +0.2 67,939 + B158DRAFT_0071 0.24 +0.1 67,947 - B158DRAFT_0071 0.25 -0.4 67,947 - B158DRAFT_0071 0.25 +0.3 67,947 - B158DRAFT_0071 0.25 -0.1 67,947 - B158DRAFT_0071 0.25 +0.7 67,985 - B158DRAFT_0071 0.32 -0.3 68,047 - B158DRAFT_0071 0.43 -0.3 68,052 + B158DRAFT_0071 0.44 -0.3 68,317 - -0.0 68,324 + +0.3 68,324 + +7.0 68,348 + -0.0 68,387 - -1.2 68,483 + +0.4 68,491 - -0.5 68,595 + +0.8 68,595 + -0.8 68,603 - -0.5 68,603 - -0.4 68,603 - -1.4 68,603 - +0.1 68,603 - +0.2 68,623 + -0.8 68,674 + B158DRAFT_0072 0.14 +1.0 68,682 - B158DRAFT_0072 0.15 -0.8 68,726 - B158DRAFT_0072 0.21 -0.2
Or see this region's nucleotide sequence