Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0899

Experiment: m.b. Cephalothin 0.009765625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0898 and B158DRAFT_0899 are separated by 37 nucleotidesB158DRAFT_0899 and B158DRAFT_0900 are separated by 442 nucleotides B158DRAFT_0898: B158DRAFT_0898 - 3-oxoacyl-(acyl-carrier-protein) synthase, at 919,446 to 920,663 _0898 B158DRAFT_0899: B158DRAFT_0899 - 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60), at 920,701 to 921,225 _0899 B158DRAFT_0900: B158DRAFT_0900 - Outer membrane receptor proteins, mostly Fe transport, at 921,668 to 923,893 _0900 Position (kb) 920 921 922Strain fitness (log2 ratio) -3 -2 -1 0 1at 919.717 kb on - strand, within B158DRAFT_0898at 919.760 kb on + strand, within B158DRAFT_0898at 919.765 kb on + strand, within B158DRAFT_0898at 919.773 kb on - strand, within B158DRAFT_0898at 919.801 kb on + strand, within B158DRAFT_0898at 919.874 kb on + strand, within B158DRAFT_0898at 919.882 kb on - strand, within B158DRAFT_0898at 919.927 kb on + strand, within B158DRAFT_0898at 919.948 kb on + strand, within B158DRAFT_0898at 919.956 kb on - strand, within B158DRAFT_0898at 920.012 kb on - strand, within B158DRAFT_0898at 920.205 kb on - strand, within B158DRAFT_0898at 920.238 kb on + strand, within B158DRAFT_0898at 920.242 kb on + strand, within B158DRAFT_0898at 920.253 kb on + strand, within B158DRAFT_0898at 920.256 kb on - strand, within B158DRAFT_0898at 920.371 kb on + strand, within B158DRAFT_0898at 920.405 kb on - strand, within B158DRAFT_0898at 920.405 kb on - strand, within B158DRAFT_0898at 920.405 kb on - strand, within B158DRAFT_0898at 920.421 kb on - strand, within B158DRAFT_0898at 920.439 kb on + strand, within B158DRAFT_0898at 920.439 kb on + strand, within B158DRAFT_0898at 920.439 kb on + strand, within B158DRAFT_0898at 920.447 kb on - strand, within B158DRAFT_0898at 920.447 kb on - strand, within B158DRAFT_0898at 920.529 kb on + strand, within B158DRAFT_0898at 920.529 kb on + strand, within B158DRAFT_0898at 920.529 kb on + strand, within B158DRAFT_0898at 920.529 kb on + strand, within B158DRAFT_0898at 920.537 kb on - strand, within B158DRAFT_0898at 920.537 kb on - strand, within B158DRAFT_0898at 920.634 kb on + strandat 920.642 kb on - strandat 920.734 kb on + strandat 920.750 kb on + strandat 920.750 kb on + strandat 920.750 kb on + strandat 920.750 kb on + strandat 920.750 kb on + strandat 920.750 kb on + strandat 920.750 kb on + strandat 920.752 kb on + strandat 920.752 kb on + strandat 920.758 kb on - strand, within B158DRAFT_0899at 920.758 kb on - strand, within B158DRAFT_0899at 920.758 kb on - strand, within B158DRAFT_0899at 920.758 kb on - strand, within B158DRAFT_0899at 920.758 kb on - strand, within B158DRAFT_0899at 920.758 kb on - strand, within B158DRAFT_0899at 920.758 kb on - strand, within B158DRAFT_0899at 920.758 kb on - strand, within B158DRAFT_0899at 920.860 kb on + strand, within B158DRAFT_0899at 920.868 kb on - strand, within B158DRAFT_0899at 920.889 kb on + strand, within B158DRAFT_0899at 920.908 kb on + strand, within B158DRAFT_0899at 920.908 kb on + strand, within B158DRAFT_0899at 920.908 kb on + strand, within B158DRAFT_0899at 920.978 kb on + strand, within B158DRAFT_0899at 920.978 kb on - strand, within B158DRAFT_0899at 920.978 kb on - strand, within B158DRAFT_0899at 920.999 kb on + strand, within B158DRAFT_0899at 920.999 kb on + strand, within B158DRAFT_0899at 921.007 kb on - strand, within B158DRAFT_0899at 921.007 kb on - strand, within B158DRAFT_0899at 921.007 kb on - strand, within B158DRAFT_0899at 921.007 kb on - strand, within B158DRAFT_0899at 921.007 kb on - strand, within B158DRAFT_0899at 921.055 kb on + strand, within B158DRAFT_0899at 921.063 kb on - strand, within B158DRAFT_0899at 921.101 kb on - strand, within B158DRAFT_0899at 921.131 kb on + strand, within B158DRAFT_0899at 921.161 kb on - strand, within B158DRAFT_0899at 921.230 kb on + strandat 921.267 kb on - strandat 921.314 kb on + strandat 921.314 kb on + strandat 921.319 kb on + strandat 921.324 kb on + strandat 921.324 kb on + strandat 921.324 kb on + strandat 921.324 kb on + strandat 921.324 kb on + strandat 921.324 kb on + strandat 921.332 kb on - strandat 921.332 kb on - strandat 921.367 kb on + strandat 921.389 kb on + strandat 921.389 kb on + strandat 921.389 kb on + strandat 921.389 kb on + strandat 921.397 kb on - strandat 921.397 kb on - strandat 921.397 kb on - strandat 921.423 kb on + strandat 921.468 kb on + strandat 921.468 kb on + strandat 921.476 kb on - strandat 921.620 kb on + strandat 921.621 kb on - strandat 921.627 kb on + strandat 921.632 kb on + strandat 921.640 kb on - strandat 921.640 kb on - strandat 921.640 kb on - strandat 921.645 kb on - strandat 921.727 kb on + strandat 921.727 kb on + strandat 921.727 kb on + strandat 921.735 kb on - strandat 921.735 kb on - strandat 921.790 kb on + strandat 921.848 kb on + strandat 921.863 kb on + strandat 921.881 kb on - strandat 921.932 kb on + strand, within B158DRAFT_0900at 921.932 kb on + strand, within B158DRAFT_0900at 921.943 kb on + strand, within B158DRAFT_0900at 921.953 kb on + strand, within B158DRAFT_0900at 921.972 kb on - strand, within B158DRAFT_0900at 921.996 kb on + strand, within B158DRAFT_0900at 921.996 kb on + strand, within B158DRAFT_0900at 922.011 kb on - strand, within B158DRAFT_0900at 922.072 kb on - strand, within B158DRAFT_0900at 922.073 kb on - strand, within B158DRAFT_0900at 922.078 kb on + strand, within B158DRAFT_0900at 922.184 kb on + strand, within B158DRAFT_0900at 922.208 kb on - strand, within B158DRAFT_0900

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cephalothin 0.009765625 mg/ml
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919,717 - B158DRAFT_0898 0.22 -0.4
919,760 + B158DRAFT_0898 0.26 -0.5
919,765 + B158DRAFT_0898 0.26 -0.3
919,773 - B158DRAFT_0898 0.27 -0.8
919,801 + B158DRAFT_0898 0.29 -0.8
919,874 + B158DRAFT_0898 0.35 -0.5
919,882 - B158DRAFT_0898 0.36 -1.0
919,927 + B158DRAFT_0898 0.39 -0.9
919,948 + B158DRAFT_0898 0.41 -0.8
919,956 - B158DRAFT_0898 0.42 -0.4
920,012 - B158DRAFT_0898 0.46 -0.5
920,205 - B158DRAFT_0898 0.62 -0.6
920,238 + B158DRAFT_0898 0.65 -0.8
920,242 + B158DRAFT_0898 0.65 +1.2
920,253 + B158DRAFT_0898 0.66 -0.1
920,256 - B158DRAFT_0898 0.67 -0.9
920,371 + B158DRAFT_0898 0.76 -0.2
920,405 - B158DRAFT_0898 0.79 -0.1
920,405 - B158DRAFT_0898 0.79 -0.8
920,405 - B158DRAFT_0898 0.79 +0.1
920,421 - B158DRAFT_0898 0.80 -0.6
920,439 + B158DRAFT_0898 0.82 +0.0
920,439 + B158DRAFT_0898 0.82 -1.0
920,439 + B158DRAFT_0898 0.82 +0.5
920,447 - B158DRAFT_0898 0.82 -0.1
920,447 - B158DRAFT_0898 0.82 -0.2
920,529 + B158DRAFT_0898 0.89 +0.4
920,529 + B158DRAFT_0898 0.89 -0.5
920,529 + B158DRAFT_0898 0.89 -1.5
920,529 + B158DRAFT_0898 0.89 -0.1
920,537 - B158DRAFT_0898 0.90 -1.3
920,537 - B158DRAFT_0898 0.90 -0.1
920,634 + -1.2
920,642 - -0.6
920,734 + +0.1
920,750 + -0.7
920,750 + -0.1
920,750 + -1.7
920,750 + -0.4
920,750 + -1.1
920,750 + -0.8
920,750 + -0.4
920,752 + -0.5
920,752 + -1.4
920,758 - B158DRAFT_0899 0.11 -0.8
920,758 - B158DRAFT_0899 0.11 -0.6
920,758 - B158DRAFT_0899 0.11 -0.6
920,758 - B158DRAFT_0899 0.11 -0.7
920,758 - B158DRAFT_0899 0.11 -0.7
920,758 - B158DRAFT_0899 0.11 -0.6
920,758 - B158DRAFT_0899 0.11 -0.3
920,758 - B158DRAFT_0899 0.11 -1.0
920,860 + B158DRAFT_0899 0.30 -0.2
920,868 - B158DRAFT_0899 0.32 -0.6
920,889 + B158DRAFT_0899 0.36 -0.9
920,908 + B158DRAFT_0899 0.39 -1.3
920,908 + B158DRAFT_0899 0.39 -1.4
920,908 + B158DRAFT_0899 0.39 -0.9
920,978 + B158DRAFT_0899 0.53 -2.5
920,978 - B158DRAFT_0899 0.53 -0.6
920,978 - B158DRAFT_0899 0.53 -0.5
920,999 + B158DRAFT_0899 0.57 -0.8
920,999 + B158DRAFT_0899 0.57 -0.4
921,007 - B158DRAFT_0899 0.58 -0.2
921,007 - B158DRAFT_0899 0.58 -0.9
921,007 - B158DRAFT_0899 0.58 -1.0
921,007 - B158DRAFT_0899 0.58 -3.7
921,007 - B158DRAFT_0899 0.58 -1.5
921,055 + B158DRAFT_0899 0.67 -0.4
921,063 - B158DRAFT_0899 0.69 -0.5
921,101 - B158DRAFT_0899 0.76 -0.8
921,131 + B158DRAFT_0899 0.82 -0.9
921,161 - B158DRAFT_0899 0.88 +0.6
921,230 + -0.3
921,267 - -0.8
921,314 + -0.6
921,314 + -1.1
921,319 + -0.4
921,324 + -0.5
921,324 + -0.1
921,324 + -1.0
921,324 + -0.1
921,324 + -1.0
921,324 + -0.7
921,332 - -0.8
921,332 - -0.7
921,367 + +0.1
921,389 + -0.3
921,389 + -0.2
921,389 + -1.0
921,389 + -0.8
921,397 - -0.7
921,397 - -0.6
921,397 - +0.3
921,423 + -0.1
921,468 + -0.1
921,468 + -0.5
921,476 - -0.1
921,620 + -0.2
921,621 - +0.1
921,627 + -0.3
921,632 + +0.1
921,640 - +0.3
921,640 - -0.3
921,640 - +0.5
921,645 - +0.0
921,727 + -0.6
921,727 + -0.0
921,727 + -0.1
921,735 - -1.2
921,735 - +0.2
921,790 + -0.3
921,848 + -0.1
921,863 + -0.3
921,881 - -0.1
921,932 + B158DRAFT_0900 0.12 -0.4
921,932 + B158DRAFT_0900 0.12 -0.3
921,943 + B158DRAFT_0900 0.12 -0.2
921,953 + B158DRAFT_0900 0.13 -0.2
921,972 - B158DRAFT_0900 0.14 +0.1
921,996 + B158DRAFT_0900 0.15 -0.2
921,996 + B158DRAFT_0900 0.15 +0.1
922,011 - B158DRAFT_0900 0.15 -0.3
922,072 - B158DRAFT_0900 0.18 -0.4
922,073 - B158DRAFT_0900 0.18 -1.0
922,078 + B158DRAFT_0900 0.18 +0.1
922,184 + B158DRAFT_0900 0.23 +0.1
922,208 - B158DRAFT_0900 0.24 -0.4

Or see this region's nucleotide sequence