Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0794

Experiment: m.b. Vanillin 2 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0792 and B158DRAFT_0793 overlap by 4 nucleotidesB158DRAFT_0793 and B158DRAFT_0794 are separated by 2 nucleotidesB158DRAFT_0794 and B158DRAFT_0795 are separated by 29 nucleotidesB158DRAFT_0795 and B158DRAFT_0796 are separated by 36 nucleotides B158DRAFT_0792: B158DRAFT_0792 - Predicted phosphotransferase related to Ser/Thr protein kinases, at 797,150 to 798,184 _0792 B158DRAFT_0793: B158DRAFT_0793 - Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon), at 798,181 to 798,885 _0793 B158DRAFT_0794: B158DRAFT_0794 - DnaJ-domain-containing proteins 1, at 798,888 to 799,700 _0794 B158DRAFT_0795: B158DRAFT_0795 - Uncharacterized protein conserved in bacteria, at 799,730 to 800,371 _0795 B158DRAFT_0796: B158DRAFT_0796 - NAD-dependent protein deacetylases, SIR2 family, at 800,408 to 801,142 _0796 Position (kb) 798 799 800Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 797.897 kb on - strand, within B158DRAFT_0792at 797.985 kb on - strand, within B158DRAFT_0792at 798.047 kb on + strand, within B158DRAFT_0792at 798.056 kb on - strand, within B158DRAFT_0792at 798.085 kb on - strandat 798.105 kb on - strandat 798.126 kb on + strandat 798.126 kb on + strandat 798.126 kb on + strandat 798.134 kb on - strandat 798.134 kb on - strandat 798.134 kb on - strandat 798.134 kb on - strandat 798.251 kb on - strandat 798.251 kb on - strandat 798.251 kb on - strandat 798.338 kb on + strand, within B158DRAFT_0793at 798.472 kb on + strand, within B158DRAFT_0793at 798.506 kb on + strand, within B158DRAFT_0793at 798.511 kb on + strand, within B158DRAFT_0793at 798.517 kb on + strand, within B158DRAFT_0793at 798.549 kb on - strand, within B158DRAFT_0793at 798.624 kb on + strand, within B158DRAFT_0793at 798.624 kb on + strand, within B158DRAFT_0793at 798.624 kb on + strand, within B158DRAFT_0793at 798.624 kb on + strand, within B158DRAFT_0793at 798.632 kb on - strand, within B158DRAFT_0793at 798.632 kb on - strand, within B158DRAFT_0793at 798.632 kb on - strand, within B158DRAFT_0793at 798.641 kb on + strand, within B158DRAFT_0793at 798.686 kb on + strand, within B158DRAFT_0793at 798.714 kb on - strand, within B158DRAFT_0793at 798.914 kb on - strandat 798.914 kb on - strandat 798.914 kb on - strandat 798.917 kb on + strandat 798.954 kb on + strandat 798.962 kb on - strandat 798.964 kb on + strandat 798.964 kb on + strandat 798.974 kb on - strand, within B158DRAFT_0794at 798.974 kb on - strand, within B158DRAFT_0794at 799.011 kb on - strand, within B158DRAFT_0794at 799.011 kb on - strand, within B158DRAFT_0794at 799.062 kb on + strand, within B158DRAFT_0794at 799.292 kb on - strand, within B158DRAFT_0794at 799.328 kb on + strand, within B158DRAFT_0794at 799.328 kb on + strand, within B158DRAFT_0794at 799.336 kb on - strand, within B158DRAFT_0794at 799.402 kb on - strand, within B158DRAFT_0794at 799.430 kb on + strand, within B158DRAFT_0794at 799.432 kb on + strand, within B158DRAFT_0794at 799.492 kb on + strand, within B158DRAFT_0794at 799.492 kb on + strand, within B158DRAFT_0794at 799.492 kb on + strand, within B158DRAFT_0794at 799.492 kb on + strand, within B158DRAFT_0794at 799.497 kb on + strand, within B158DRAFT_0794at 799.497 kb on + strand, within B158DRAFT_0794at 799.500 kb on - strand, within B158DRAFT_0794at 799.500 kb on - strand, within B158DRAFT_0794at 799.588 kb on - strand, within B158DRAFT_0794at 800.426 kb on + strandat 800.434 kb on - strandat 800.446 kb on + strandat 800.539 kb on - strand, within B158DRAFT_0796at 800.552 kb on + strand, within B158DRAFT_0796at 800.558 kb on - strand, within B158DRAFT_0796at 800.568 kb on + strand, within B158DRAFT_0796at 800.576 kb on - strand, within B158DRAFT_0796at 800.576 kb on - strand, within B158DRAFT_0796at 800.647 kb on + strand, within B158DRAFT_0796at 800.647 kb on + strand, within B158DRAFT_0796at 800.655 kb on - strand, within B158DRAFT_0796

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Vanillin 2 mM
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797,897 - B158DRAFT_0792 0.72 -1.7
797,985 - B158DRAFT_0792 0.81 -1.5
798,047 + B158DRAFT_0792 0.87 -0.2
798,056 - B158DRAFT_0792 0.88 -1.9
798,085 - -1.7
798,105 - -4.0
798,126 + -0.9
798,126 + -2.2
798,126 + -1.0
798,134 - -1.5
798,134 - -1.3
798,134 - -1.3
798,134 - -1.2
798,251 - -2.9
798,251 - -3.1
798,251 - -0.9
798,338 + B158DRAFT_0793 0.22 -1.3
798,472 + B158DRAFT_0793 0.41 -1.4
798,506 + B158DRAFT_0793 0.46 -3.5
798,511 + B158DRAFT_0793 0.47 -2.6
798,517 + B158DRAFT_0793 0.48 -2.9
798,549 - B158DRAFT_0793 0.52 -0.6
798,624 + B158DRAFT_0793 0.63 -2.7
798,624 + B158DRAFT_0793 0.63 -2.8
798,624 + B158DRAFT_0793 0.63 -4.0
798,624 + B158DRAFT_0793 0.63 -2.0
798,632 - B158DRAFT_0793 0.64 -2.9
798,632 - B158DRAFT_0793 0.64 -2.9
798,632 - B158DRAFT_0793 0.64 -2.0
798,641 + B158DRAFT_0793 0.65 -2.9
798,686 + B158DRAFT_0793 0.72 -3.9
798,714 - B158DRAFT_0793 0.76 -4.2
798,914 - +0.1
798,914 - -0.3
798,914 - -0.1
798,917 + +0.1
798,954 + -0.1
798,962 - +0.4
798,964 + -0.1
798,964 + +0.3
798,974 - B158DRAFT_0794 0.11 +0.3
798,974 - B158DRAFT_0794 0.11 +0.9
799,011 - B158DRAFT_0794 0.15 +0.4
799,011 - B158DRAFT_0794 0.15 -0.2
799,062 + B158DRAFT_0794 0.21 -0.3
799,292 - B158DRAFT_0794 0.50 -1.1
799,328 + B158DRAFT_0794 0.54 -0.2
799,328 + B158DRAFT_0794 0.54 +0.3
799,336 - B158DRAFT_0794 0.55 +0.6
799,402 - B158DRAFT_0794 0.63 +0.1
799,430 + B158DRAFT_0794 0.67 -0.0
799,432 + B158DRAFT_0794 0.67 +0.2
799,492 + B158DRAFT_0794 0.74 -0.0
799,492 + B158DRAFT_0794 0.74 +0.3
799,492 + B158DRAFT_0794 0.74 -0.4
799,492 + B158DRAFT_0794 0.74 +0.5
799,497 + B158DRAFT_0794 0.75 -0.3
799,497 + B158DRAFT_0794 0.75 +0.2
799,500 - B158DRAFT_0794 0.75 -1.0
799,500 - B158DRAFT_0794 0.75 -0.5
799,588 - B158DRAFT_0794 0.86 -0.1
800,426 + +0.0
800,434 - +0.3
800,446 + -0.3
800,539 - B158DRAFT_0796 0.18 -0.2
800,552 + B158DRAFT_0796 0.20 -0.1
800,558 - B158DRAFT_0796 0.20 +0.3
800,568 + B158DRAFT_0796 0.22 -0.1
800,576 - B158DRAFT_0796 0.23 -0.5
800,576 - B158DRAFT_0796 0.23 +0.1
800,647 + B158DRAFT_0796 0.33 -0.2
800,647 + B158DRAFT_0796 0.33 +0.0
800,655 - B158DRAFT_0796 0.34 +0.1

Or see this region's nucleotide sequence