Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0394

Experiment: m.b. Vanillin 2 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0392 and B158DRAFT_0393 are separated by 61 nucleotidesB158DRAFT_0393 and B158DRAFT_0394 are separated by 5 nucleotidesB158DRAFT_0394 and B158DRAFT_0395 are separated by 14 nucleotides B158DRAFT_0392: B158DRAFT_0392 - Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis, at 397,287 to 397,898 _0392 B158DRAFT_0393: B158DRAFT_0393 - Lauroyl/myristoyl acyltransferase, at 397,960 to 398,865 _0393 B158DRAFT_0394: B158DRAFT_0394 - potassium uptake protein, TrkH family, at 398,871 to 400,319 _0394 B158DRAFT_0395: B158DRAFT_0395 - K+ transport systems, NAD-binding component, at 400,334 to 401,707 _0395 Position (kb) 398 399 400 401Strain fitness (log2 ratio) -1 0 1at 398.095 kb on + strand, within B158DRAFT_0393at 398.109 kb on - strand, within B158DRAFT_0393at 398.110 kb on + strand, within B158DRAFT_0393at 398.144 kb on + strand, within B158DRAFT_0393at 398.145 kb on + strand, within B158DRAFT_0393at 398.295 kb on - strand, within B158DRAFT_0393at 398.321 kb on - strand, within B158DRAFT_0393at 398.322 kb on + strand, within B158DRAFT_0393at 398.356 kb on + strand, within B158DRAFT_0393at 398.356 kb on + strand, within B158DRAFT_0393at 398.356 kb on + strand, within B158DRAFT_0393at 398.356 kb on + strand, within B158DRAFT_0393at 398.359 kb on + strand, within B158DRAFT_0393at 398.361 kb on + strand, within B158DRAFT_0393at 398.364 kb on - strand, within B158DRAFT_0393at 398.469 kb on + strand, within B158DRAFT_0393at 398.477 kb on - strand, within B158DRAFT_0393at 398.506 kb on - strand, within B158DRAFT_0393at 398.577 kb on - strand, within B158DRAFT_0393at 398.599 kb on + strand, within B158DRAFT_0393at 398.650 kb on + strand, within B158DRAFT_0393at 398.706 kb on - strand, within B158DRAFT_0393at 398.734 kb on + strand, within B158DRAFT_0393at 398.807 kb on - strandat 400.330 kb on - strandat 400.330 kb on - strandat 400.330 kb on - strandat 400.335 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Vanillin 2 mM
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398,095 + B158DRAFT_0393 0.15 +0.4
398,109 - B158DRAFT_0393 0.16 +0.1
398,110 + B158DRAFT_0393 0.17 +0.3
398,144 + B158DRAFT_0393 0.20 +0.5
398,145 + B158DRAFT_0393 0.20 +0.3
398,295 - B158DRAFT_0393 0.37 +0.4
398,321 - B158DRAFT_0393 0.40 -0.1
398,322 + B158DRAFT_0393 0.40 -0.0
398,356 + B158DRAFT_0393 0.44 +0.9
398,356 + B158DRAFT_0393 0.44 +0.2
398,356 + B158DRAFT_0393 0.44 +0.4
398,356 + B158DRAFT_0393 0.44 +0.7
398,359 + B158DRAFT_0393 0.44 +0.8
398,361 + B158DRAFT_0393 0.44 +0.3
398,364 - B158DRAFT_0393 0.45 +0.5
398,469 + B158DRAFT_0393 0.56 +0.2
398,477 - B158DRAFT_0393 0.57 -0.3
398,506 - B158DRAFT_0393 0.60 -0.5
398,577 - B158DRAFT_0393 0.68 -0.1
398,599 + B158DRAFT_0393 0.71 +0.3
398,650 + B158DRAFT_0393 0.76 +0.1
398,706 - B158DRAFT_0393 0.82 +0.6
398,734 + B158DRAFT_0393 0.85 +0.5
398,807 - +0.4
400,330 - -0.2
400,330 - +0.1
400,330 - +0.1
400,335 - -0.6

Or see this region's nucleotide sequence