Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0158

Experiment: m.b. Vanillin 2 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0156 and B158DRAFT_0157 are separated by 394 nucleotidesB158DRAFT_0157 and B158DRAFT_0158 are separated by 12 nucleotidesB158DRAFT_0158 and B158DRAFT_0159 are separated by 44 nucleotides B158DRAFT_0156: B158DRAFT_0156 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 154,240 to 154,950 _0156 B158DRAFT_0157: B158DRAFT_0157 - 3-dehydroquinate dehydratase (EC 4.2.1.10), at 155,345 to 155,785 _0157 B158DRAFT_0158: B158DRAFT_0158 - acetyl-CoA carboxylase, biotin carboxyl carrier protein, at 155,798 to 156,256 _0158 B158DRAFT_0159: B158DRAFT_0159 - acetyl-CoA carboxylase, biotin carboxylase subunit, at 156,301 to 157,650 _0159 Position (kb) 155 156 157Strain fitness (log2 ratio) -1 0 1at 154.853 kb on + strand, within B158DRAFT_0156at 154.861 kb on - strand, within B158DRAFT_0156at 154.861 kb on - strand, within B158DRAFT_0156at 155.073 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Vanillin 2 mM
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154,853 + B158DRAFT_0156 0.86 -0.6
154,861 - B158DRAFT_0156 0.87 +0.5
154,861 - B158DRAFT_0156 0.87 +0.1
155,073 + -0.2

Or see this region's nucleotide sequence