Experiment: m.b. Vanillin 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0084 and B158DRAFT_0085 are separated by 230 nucleotides B158DRAFT_0085 and B158DRAFT_0086 are separated by 7 nucleotides B158DRAFT_0086 and B158DRAFT_0087 overlap by 1 nucleotides B158DRAFT_0087 and B158DRAFT_0088 are separated by 2 nucleotides
B158DRAFT_0084: B158DRAFT_0084 - penicillin-binding protein 2, at 78,519 to 80,447
_0084
B158DRAFT_0085: B158DRAFT_0085 - rRNA large subunit m3Psi methyltransferase RlmH, at 80,678 to 81,148
_0085
B158DRAFT_0086: B158DRAFT_0086 - iojap-like ribosome-associated protein, at 81,156 to 81,509
_0086
B158DRAFT_0087: B158DRAFT_0087 - nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18), at 81,509 to 82,183
_0087
B158DRAFT_0088: B158DRAFT_0088 - DNA polymerase III, delta subunit (EC 2.7.7.7), at 82,186 to 83,265
_0088
Position (kb)
81
82 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 80.526 kb on + strand at 80.555 kb on - strand at 80.555 kb on - strand at 80.555 kb on - strand at 80.555 kb on - strand at 80.573 kb on + strand at 80.579 kb on + strand at 80.581 kb on - strand at 80.581 kb on - strand at 80.637 kb on - strand at 80.789 kb on + strand, within B158DRAFT_0085 at 80.854 kb on + strand, within B158DRAFT_0085 at 80.862 kb on - strand, within B158DRAFT_0085 at 80.960 kb on - strand, within B158DRAFT_0085 at 80.981 kb on - strand, within B158DRAFT_0085 at 81.033 kb on - strand, within B158DRAFT_0085 at 81.036 kb on + strand, within B158DRAFT_0085 at 81.097 kb on + strand, within B158DRAFT_0085 at 81.097 kb on + strand, within B158DRAFT_0085 at 81.105 kb on - strand at 81.105 kb on - strand at 81.105 kb on - strand at 81.110 kb on - strand at 81.154 kb on + strand at 81.162 kb on + strand at 81.256 kb on + strand, within B158DRAFT_0086 at 81.259 kb on - strand, within B158DRAFT_0086 at 81.298 kb on + strand, within B158DRAFT_0086 at 81.307 kb on - strand, within B158DRAFT_0086 at 81.322 kb on + strand, within B158DRAFT_0086 at 81.347 kb on - strand, within B158DRAFT_0086 at 81.347 kb on - strand, within B158DRAFT_0086 at 81.369 kb on - strand, within B158DRAFT_0086 at 81.417 kb on + strand, within B158DRAFT_0086 at 81.529 kb on - strand at 82.230 kb on - strand at 82.230 kb on - strand at 82.230 kb on - strand at 82.230 kb on - strand at 82.230 kb on - strand at 82.230 kb on - strand at 82.230 kb on - strand at 82.230 kb on - strand at 82.230 kb on - strand at 82.240 kb on - strand at 82.240 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vanillin 2 mM remove 80,526 + -0.6 80,555 - +0.1 80,555 - +0.2 80,555 - +0.8 80,555 - -0.2 80,573 + -0.6 80,579 + -3.0 80,581 - -0.5 80,581 - +0.0 80,637 - +0.5 80,789 + B158DRAFT_0085 0.24 +0.4 80,854 + B158DRAFT_0085 0.37 -0.1 80,862 - B158DRAFT_0085 0.39 -0.4 80,960 - B158DRAFT_0085 0.60 -0.0 80,981 - B158DRAFT_0085 0.64 +0.1 81,033 - B158DRAFT_0085 0.75 +0.0 81,036 + B158DRAFT_0085 0.76 -0.5 81,097 + B158DRAFT_0085 0.89 -0.1 81,097 + B158DRAFT_0085 0.89 +0.1 81,105 - +0.1 81,105 - +0.0 81,105 - +0.4 81,110 - -0.2 81,154 + +0.7 81,162 + -0.3 81,256 + B158DRAFT_0086 0.28 -0.3 81,259 - B158DRAFT_0086 0.29 +0.2 81,298 + B158DRAFT_0086 0.40 +0.5 81,307 - B158DRAFT_0086 0.43 +0.1 81,322 + B158DRAFT_0086 0.47 -0.9 81,347 - B158DRAFT_0086 0.54 +0.1 81,347 - B158DRAFT_0086 0.54 +0.7 81,369 - B158DRAFT_0086 0.60 +0.3 81,417 + B158DRAFT_0086 0.74 -0.3 81,529 - +0.1 82,230 - -1.5 82,230 - +0.1 82,230 - -1.3 82,230 - -0.4 82,230 - -0.6 82,230 - -1.0 82,230 - +0.4 82,230 - -0.2 82,230 - -0.2 82,240 - -0.4 82,240 - -0.1
Or see this region's nucleotide sequence