Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2405 and B158DRAFT_2406 are separated by 50 nucleotides B158DRAFT_2406 and B158DRAFT_2407 are separated by 188 nucleotides B158DRAFT_2407 and B158DRAFT_2408 are separated by 61 nucleotides
B158DRAFT_2405: B158DRAFT_2405 - hypothetical protein, at 576,459 to 577,190
_2405
B158DRAFT_2406: B158DRAFT_2406 - hypothetical protein, at 577,241 to 577,819
_2406
B158DRAFT_2407: B158DRAFT_2407 - riboflavin kinase/FMN adenylyltransferase, at 578,008 to 578,943
_2407
B158DRAFT_2408: B158DRAFT_2408 - Isoleucyl-tRNA synthetase (EC 6.1.1.5), at 579,005 to 581,809
_2408
Position (kb) 578
579 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 577.017 kb on + strand, within B158DRAFT_2405 at 577.017 kb on + strand, within B158DRAFT_2405 at 577.025 kb on - strand, within B158DRAFT_2405 at 577.025 kb on - strand, within B158DRAFT_2405 at 577.065 kb on + strand, within B158DRAFT_2405 at 577.065 kb on + strand, within B158DRAFT_2405 at 577.073 kb on - strand, within B158DRAFT_2405 at 577.073 kb on - strand, within B158DRAFT_2405 at 577.110 kb on - strand, within B158DRAFT_2405 at 577.112 kb on + strand, within B158DRAFT_2405 at 577.120 kb on + strand at 577.120 kb on + strand at 577.128 kb on - strand at 577.158 kb on + strand at 577.168 kb on + strand at 577.187 kb on - strand at 577.256 kb on - strand at 577.256 kb on - strand at 577.259 kb on + strand at 577.269 kb on + strand at 577.269 kb on + strand at 577.269 kb on + strand at 577.269 kb on + strand at 577.277 kb on - strand at 577.277 kb on - strand at 577.326 kb on + strand, within B158DRAFT_2406 at 577.382 kb on + strand, within B158DRAFT_2406 at 577.421 kb on + strand, within B158DRAFT_2406 at 577.428 kb on + strand, within B158DRAFT_2406 at 577.436 kb on - strand, within B158DRAFT_2406 at 577.438 kb on + strand, within B158DRAFT_2406 at 577.438 kb on + strand, within B158DRAFT_2406 at 577.446 kb on - strand, within B158DRAFT_2406 at 577.542 kb on + strand, within B158DRAFT_2406 at 577.542 kb on + strand, within B158DRAFT_2406 at 577.542 kb on + strand, within B158DRAFT_2406 at 577.542 kb on + strand, within B158DRAFT_2406 at 577.542 kb on + strand, within B158DRAFT_2406 at 577.542 kb on + strand, within B158DRAFT_2406 at 577.550 kb on - strand, within B158DRAFT_2406 at 577.550 kb on - strand, within B158DRAFT_2406 at 577.550 kb on - strand, within B158DRAFT_2406 at 577.550 kb on - strand, within B158DRAFT_2406 at 577.550 kb on - strand, within B158DRAFT_2406 at 577.550 kb on - strand, within B158DRAFT_2406 at 577.563 kb on + strand, within B158DRAFT_2406 at 577.591 kb on + strand, within B158DRAFT_2406 at 577.599 kb on - strand, within B158DRAFT_2406 at 577.712 kb on + strand, within B158DRAFT_2406 at 577.777 kb on + strand at 577.785 kb on - strand at 577.855 kb on + strand at 577.855 kb on + strand at 577.855 kb on + strand at 577.863 kb on - strand at 578.502 kb on + strand, within B158DRAFT_2407 at 578.956 kb on + strand at 578.956 kb on + strand at 578.956 kb on + strand at 578.956 kb on + strand at 578.991 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 577,017 + B158DRAFT_2405 0.76 -0.9 577,017 + B158DRAFT_2405 0.76 -0.9 577,025 - B158DRAFT_2405 0.77 -0.7 577,025 - B158DRAFT_2405 0.77 -0.7 577,065 + B158DRAFT_2405 0.83 -0.5 577,065 + B158DRAFT_2405 0.83 +0.2 577,073 - B158DRAFT_2405 0.84 +1.0 577,073 - B158DRAFT_2405 0.84 -0.5 577,110 - B158DRAFT_2405 0.89 -2.1 577,112 + B158DRAFT_2405 0.89 -0.5 577,120 + +4.2 577,120 + +1.4 577,128 - -0.8 577,158 + -0.8 577,168 + -1.8 577,187 - +1.0 577,256 - +1.1 577,256 - +1.0 577,259 + -2.3 577,269 + +0.1 577,269 + -0.5 577,269 + +0.0 577,269 + -1.1 577,277 - +1.6 577,277 - -0.2 577,326 + B158DRAFT_2406 0.15 -1.6 577,382 + B158DRAFT_2406 0.24 -0.3 577,421 + B158DRAFT_2406 0.31 -0.5 577,428 + B158DRAFT_2406 0.32 -0.7 577,436 - B158DRAFT_2406 0.34 +3.1 577,438 + B158DRAFT_2406 0.34 -1.2 577,438 + B158DRAFT_2406 0.34 -1.2 577,446 - B158DRAFT_2406 0.35 -0.4 577,542 + B158DRAFT_2406 0.52 -0.1 577,542 + B158DRAFT_2406 0.52 +1.4 577,542 + B158DRAFT_2406 0.52 +1.2 577,542 + B158DRAFT_2406 0.52 +2.2 577,542 + B158DRAFT_2406 0.52 -0.6 577,542 + B158DRAFT_2406 0.52 -1.1 577,550 - B158DRAFT_2406 0.53 -2.4 577,550 - B158DRAFT_2406 0.53 +0.9 577,550 - B158DRAFT_2406 0.53 -0.8 577,550 - B158DRAFT_2406 0.53 +0.9 577,550 - B158DRAFT_2406 0.53 +0.2 577,550 - B158DRAFT_2406 0.53 -0.4 577,563 + B158DRAFT_2406 0.56 +0.6 577,591 + B158DRAFT_2406 0.60 +0.1 577,599 - B158DRAFT_2406 0.62 -0.3 577,712 + B158DRAFT_2406 0.81 +0.8 577,777 + +0.3 577,785 - -1.2 577,855 + -0.3 577,855 + -1.1 577,855 + +0.4 577,863 - -2.6 578,502 + B158DRAFT_2407 0.53 +1.8 578,956 + +2.0 578,956 + -1.5 578,956 + +0.7 578,956 + -1.8 578,991 + -1.3
Or see this region's nucleotide sequence