Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2335

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2333 and B158DRAFT_2334 are separated by 224 nucleotidesB158DRAFT_2334 and B158DRAFT_2335 are separated by 486 nucleotidesB158DRAFT_2335 and B158DRAFT_2336 are separated by 116 nucleotides B158DRAFT_2333: B158DRAFT_2333 - rhomboid family GlyGly-CTERM serine protease, at 499,013 to 499,630 _2333 B158DRAFT_2334: B158DRAFT_2334 - hypothetical protein, at 499,855 to 500,010 _2334 B158DRAFT_2335: B158DRAFT_2335 - hypothetical protein, at 500,497 to 500,889 _2335 B158DRAFT_2336: B158DRAFT_2336 - hypothetical protein, at 501,006 to 501,395 _2336 Position (kb) 500 501Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5at 499.499 kb on + strand, within B158DRAFT_2333at 499.507 kb on - strand, within B158DRAFT_2333at 499.507 kb on - strand, within B158DRAFT_2333at 499.507 kb on - strand, within B158DRAFT_2333at 499.534 kb on - strand, within B158DRAFT_2333at 499.534 kb on - strand, within B158DRAFT_2333at 499.974 kb on + strand, within B158DRAFT_2334at 499.982 kb on - strand, within B158DRAFT_2334at 500.122 kb on - strandat 500.195 kb on + strandat 500.264 kb on + strandat 500.270 kb on - strandat 500.310 kb on - strandat 500.402 kb on + strandat 500.402 kb on + strandat 500.402 kb on + strandat 500.521 kb on + strandat 500.546 kb on - strand, within B158DRAFT_2335at 500.546 kb on - strand, within B158DRAFT_2335at 500.548 kb on + strand, within B158DRAFT_2335at 500.551 kb on - strand, within B158DRAFT_2335at 500.553 kb on + strand, within B158DRAFT_2335at 500.553 kb on + strand, within B158DRAFT_2335at 500.556 kb on - strand, within B158DRAFT_2335at 500.556 kb on - strand, within B158DRAFT_2335at 500.561 kb on - strand, within B158DRAFT_2335at 500.561 kb on - strand, within B158DRAFT_2335at 500.561 kb on - strand, within B158DRAFT_2335at 500.561 kb on - strand, within B158DRAFT_2335at 500.561 kb on - strand, within B158DRAFT_2335at 500.561 kb on - strand, within B158DRAFT_2335at 500.561 kb on - strand, within B158DRAFT_2335at 500.561 kb on - strand, within B158DRAFT_2335at 500.585 kb on + strand, within B158DRAFT_2335at 500.607 kb on + strand, within B158DRAFT_2335at 500.610 kb on - strand, within B158DRAFT_2335at 500.615 kb on - strand, within B158DRAFT_2335at 500.682 kb on - strand, within B158DRAFT_2335at 500.784 kb on - strand, within B158DRAFT_2335at 500.784 kb on - strand, within B158DRAFT_2335at 500.848 kb on + strand, within B158DRAFT_2335at 500.849 kb on + strand, within B158DRAFT_2335at 500.849 kb on + strand, within B158DRAFT_2335at 500.857 kb on - strandat 500.879 kb on + strandat 501.046 kb on - strand, within B158DRAFT_2336at 501.049 kb on + strand, within B158DRAFT_2336at 501.094 kb on + strand, within B158DRAFT_2336at 501.101 kb on + strand, within B158DRAFT_2336at 501.102 kb on - strand, within B158DRAFT_2336at 501.109 kb on - strand, within B158DRAFT_2336at 501.129 kb on - strand, within B158DRAFT_2336at 501.135 kb on - strand, within B158DRAFT_2336at 501.185 kb on - strand, within B158DRAFT_2336at 501.187 kb on + strand, within B158DRAFT_2336at 501.187 kb on + strand, within B158DRAFT_2336at 501.187 kb on + strand, within B158DRAFT_2336at 501.187 kb on + strand, within B158DRAFT_2336at 501.187 kb on + strand, within B158DRAFT_2336at 501.187 kb on + strand, within B158DRAFT_2336at 501.195 kb on - strand, within B158DRAFT_2336at 501.195 kb on - strand, within B158DRAFT_2336at 501.195 kb on - strand, within B158DRAFT_2336at 501.195 kb on - strand, within B158DRAFT_2336at 501.195 kb on - strand, within B158DRAFT_2336at 501.195 kb on - strand, within B158DRAFT_2336at 501.195 kb on - strand, within B158DRAFT_2336at 501.195 kb on - strand, within B158DRAFT_2336at 501.209 kb on - strand, within B158DRAFT_2336at 501.214 kb on - strand, within B158DRAFT_2336at 501.225 kb on + strand, within B158DRAFT_2336at 501.233 kb on - strand, within B158DRAFT_2336at 501.233 kb on - strand, within B158DRAFT_2336at 501.312 kb on + strand, within B158DRAFT_2336at 501.319 kb on + strand, within B158DRAFT_2336at 501.319 kb on + strand, within B158DRAFT_2336at 501.319 kb on + strand, within B158DRAFT_2336at 501.319 kb on + strand, within B158DRAFT_2336at 501.319 kb on + strand, within B158DRAFT_2336at 501.319 kb on + strand, within B158DRAFT_2336at 501.319 kb on + strand, within B158DRAFT_2336at 501.319 kb on + strand, within B158DRAFT_2336at 501.319 kb on + strand, within B158DRAFT_2336at 501.319 kb on + strand, within B158DRAFT_2336at 501.327 kb on - strand, within B158DRAFT_2336at 501.327 kb on - strand, within B158DRAFT_2336at 501.327 kb on - strand, within B158DRAFT_2336at 501.327 kb on - strand, within B158DRAFT_2336at 501.337 kb on - strand, within B158DRAFT_2336at 501.337 kb on - strand, within B158DRAFT_2336at 501.347 kb on + strand, within B158DRAFT_2336at 501.347 kb on + strand, within B158DRAFT_2336at 501.347 kb on + strand, within B158DRAFT_2336at 501.347 kb on + strand, within B158DRAFT_2336at 501.347 kb on + strand, within B158DRAFT_2336at 501.347 kb on + strand, within B158DRAFT_2336at 501.347 kb on + strand, within B158DRAFT_2336at 501.347 kb on + strand, within B158DRAFT_2336at 501.349 kb on + strand, within B158DRAFT_2336at 501.355 kb on - strand, within B158DRAFT_2336at 501.355 kb on - strand, within B158DRAFT_2336at 501.355 kb on - strand, within B158DRAFT_2336at 501.355 kb on - strand, within B158DRAFT_2336at 501.355 kb on - strand, within B158DRAFT_2336at 501.355 kb on - strand, within B158DRAFT_2336at 501.355 kb on - strand, within B158DRAFT_2336at 501.355 kb on - strand, within B158DRAFT_2336at 501.355 kb on - strand, within B158DRAFT_2336at 501.355 kb on - strand, within B158DRAFT_2336at 501.355 kb on - strand, within B158DRAFT_2336at 501.362 kb on - strandat 501.569 kb on - strandat 501.646 kb on + strandat 501.646 kb on + strandat 501.654 kb on - strandat 501.654 kb on - strandat 501.654 kb on - strandat 501.716 kb on + strandat 501.742 kb on + strandat 501.750 kb on - strandat 501.750 kb on - strandat 501.750 kb on - strandat 501.761 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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499,499 + B158DRAFT_2333 0.79 -1.0
499,507 - B158DRAFT_2333 0.80 -0.9
499,507 - B158DRAFT_2333 0.80 +1.8
499,507 - B158DRAFT_2333 0.80 -0.5
499,534 - B158DRAFT_2333 0.84 -1.6
499,534 - B158DRAFT_2333 0.84 -0.0
499,974 + B158DRAFT_2334 0.76 -2.3
499,982 - B158DRAFT_2334 0.81 +0.5
500,122 - -0.5
500,195 + +0.9
500,264 + -0.2
500,270 - -0.1
500,310 - -1.5
500,402 + -1.3
500,402 + -0.8
500,402 + +0.4
500,521 + +1.2
500,546 - B158DRAFT_2335 0.12 +0.3
500,546 - B158DRAFT_2335 0.12 -0.6
500,548 + B158DRAFT_2335 0.13 -1.9
500,551 - B158DRAFT_2335 0.14 -2.4
500,553 + B158DRAFT_2335 0.14 +0.4
500,553 + B158DRAFT_2335 0.14 -1.0
500,556 - B158DRAFT_2335 0.15 +2.4
500,556 - B158DRAFT_2335 0.15 -1.4
500,561 - B158DRAFT_2335 0.16 +0.8
500,561 - B158DRAFT_2335 0.16 -0.5
500,561 - B158DRAFT_2335 0.16 +1.5
500,561 - B158DRAFT_2335 0.16 +0.5
500,561 - B158DRAFT_2335 0.16 -1.8
500,561 - B158DRAFT_2335 0.16 -0.6
500,561 - B158DRAFT_2335 0.16 -0.8
500,561 - B158DRAFT_2335 0.16 -0.3
500,585 + B158DRAFT_2335 0.22 +1.5
500,607 + B158DRAFT_2335 0.28 +0.5
500,610 - B158DRAFT_2335 0.29 +0.4
500,615 - B158DRAFT_2335 0.30 -1.1
500,682 - B158DRAFT_2335 0.47 -0.9
500,784 - B158DRAFT_2335 0.73 -0.6
500,784 - B158DRAFT_2335 0.73 -0.3
500,848 + B158DRAFT_2335 0.89 -0.8
500,849 + B158DRAFT_2335 0.90 +0.4
500,849 + B158DRAFT_2335 0.90 +0.5
500,857 - -0.8
500,879 + +0.1
501,046 - B158DRAFT_2336 0.10 -0.4
501,049 + B158DRAFT_2336 0.11 -0.2
501,094 + B158DRAFT_2336 0.23 -0.2
501,101 + B158DRAFT_2336 0.24 +0.8
501,102 - B158DRAFT_2336 0.25 -0.6
501,109 - B158DRAFT_2336 0.26 +0.9
501,129 - B158DRAFT_2336 0.32 +4.9
501,135 - B158DRAFT_2336 0.33 -2.0
501,185 - B158DRAFT_2336 0.46 -0.2
501,187 + B158DRAFT_2336 0.46 +0.1
501,187 + B158DRAFT_2336 0.46 -0.0
501,187 + B158DRAFT_2336 0.46 +2.5
501,187 + B158DRAFT_2336 0.46 +2.4
501,187 + B158DRAFT_2336 0.46 -0.0
501,187 + B158DRAFT_2336 0.46 +1.8
501,195 - B158DRAFT_2336 0.48 +0.9
501,195 - B158DRAFT_2336 0.48 -0.8
501,195 - B158DRAFT_2336 0.48 +0.5
501,195 - B158DRAFT_2336 0.48 +0.9
501,195 - B158DRAFT_2336 0.48 +0.3
501,195 - B158DRAFT_2336 0.48 -1.0
501,195 - B158DRAFT_2336 0.48 +0.3
501,195 - B158DRAFT_2336 0.48 -0.5
501,209 - B158DRAFT_2336 0.52 -0.2
501,214 - B158DRAFT_2336 0.53 +5.7
501,225 + B158DRAFT_2336 0.56 -0.6
501,233 - B158DRAFT_2336 0.58 +3.8
501,233 - B158DRAFT_2336 0.58 -1.8
501,312 + B158DRAFT_2336 0.78 -1.0
501,319 + B158DRAFT_2336 0.80 -1.4
501,319 + B158DRAFT_2336 0.80 +3.8
501,319 + B158DRAFT_2336 0.80 -2.1
501,319 + B158DRAFT_2336 0.80 -1.1
501,319 + B158DRAFT_2336 0.80 -1.1
501,319 + B158DRAFT_2336 0.80 +0.3
501,319 + B158DRAFT_2336 0.80 +0.0
501,319 + B158DRAFT_2336 0.80 -0.3
501,319 + B158DRAFT_2336 0.80 -0.5
501,319 + B158DRAFT_2336 0.80 +0.3
501,327 - B158DRAFT_2336 0.82 -0.5
501,327 - B158DRAFT_2336 0.82 -0.0
501,327 - B158DRAFT_2336 0.82 -0.1
501,327 - B158DRAFT_2336 0.82 +3.8
501,337 - B158DRAFT_2336 0.85 -2.3
501,337 - B158DRAFT_2336 0.85 -0.9
501,347 + B158DRAFT_2336 0.87 -0.1
501,347 + B158DRAFT_2336 0.87 -0.0
501,347 + B158DRAFT_2336 0.87 +3.2
501,347 + B158DRAFT_2336 0.87 -1.6
501,347 + B158DRAFT_2336 0.87 +0.1
501,347 + B158DRAFT_2336 0.87 +0.1
501,347 + B158DRAFT_2336 0.87 -0.8
501,347 + B158DRAFT_2336 0.87 -0.0
501,349 + B158DRAFT_2336 0.88 -1.5
501,355 - B158DRAFT_2336 0.89 -0.5
501,355 - B158DRAFT_2336 0.89 +0.6
501,355 - B158DRAFT_2336 0.89 -0.4
501,355 - B158DRAFT_2336 0.89 +0.4
501,355 - B158DRAFT_2336 0.89 -0.0
501,355 - B158DRAFT_2336 0.89 -0.3
501,355 - B158DRAFT_2336 0.89 -0.9
501,355 - B158DRAFT_2336 0.89 +0.2
501,355 - B158DRAFT_2336 0.89 -0.6
501,355 - B158DRAFT_2336 0.89 +0.0
501,355 - B158DRAFT_2336 0.89 -0.4
501,362 - -1.1
501,569 - -0.6
501,646 + -0.7
501,646 + -1.2
501,654 - -2.4
501,654 - +0.8
501,654 - -2.4
501,716 + -0.2
501,742 + -0.5
501,750 - +0.1
501,750 - -2.0
501,750 - +0.0
501,761 + +2.4

Or see this region's nucleotide sequence