Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2108 and B158DRAFT_2109 are separated by 65 nucleotides B158DRAFT_2109 and B158DRAFT_2110 are separated by 98 nucleotides
B158DRAFT_2108: B158DRAFT_2108 - Putative lipoprotein, at 240,431 to 242,269
_2108
B158DRAFT_2109: B158DRAFT_2109 - probable S-adenosylmethionine-dependent methyltransferase, YraL family, at 242,335 to 243,204
_2109
B158DRAFT_2110: B158DRAFT_2110 - Protein of unknown function (DUF3016)., at 243,303 to 243,797
_2110
Position (kb) 242
243
244 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 241.580 kb on - strand, within B158DRAFT_2108 at 241.877 kb on - strand, within B158DRAFT_2108 at 241.879 kb on + strand, within B158DRAFT_2108 at 242.360 kb on - strand at 242.360 kb on - strand at 242.363 kb on - strand at 242.387 kb on + strand at 242.485 kb on - strand, within B158DRAFT_2109 at 242.489 kb on + strand, within B158DRAFT_2109 at 242.497 kb on - strand, within B158DRAFT_2109 at 242.504 kb on - strand, within B158DRAFT_2109 at 242.555 kb on - strand, within B158DRAFT_2109 at 242.590 kb on - strand, within B158DRAFT_2109 at 242.605 kb on + strand, within B158DRAFT_2109 at 242.613 kb on - strand, within B158DRAFT_2109 at 242.629 kb on + strand, within B158DRAFT_2109 at 242.681 kb on + strand, within B158DRAFT_2109 at 242.693 kb on + strand, within B158DRAFT_2109 at 242.725 kb on + strand, within B158DRAFT_2109 at 242.725 kb on + strand, within B158DRAFT_2109 at 242.733 kb on - strand, within B158DRAFT_2109 at 242.733 kb on - strand, within B158DRAFT_2109 at 242.733 kb on - strand, within B158DRAFT_2109 at 242.733 kb on - strand, within B158DRAFT_2109 at 242.754 kb on + strand, within B158DRAFT_2109 at 243.125 kb on - strand at 243.139 kb on + strand at 243.174 kb on - strand at 243.231 kb on - strand at 243.263 kb on + strand at 243.368 kb on + strand, within B158DRAFT_2110 at 243.376 kb on - strand, within B158DRAFT_2110 at 243.376 kb on - strand, within B158DRAFT_2110 at 243.415 kb on + strand, within B158DRAFT_2110 at 243.592 kb on - strand, within B158DRAFT_2110 at 243.660 kb on + strand, within B158DRAFT_2110 at 243.669 kb on - strand, within B158DRAFT_2110 at 243.670 kb on + strand, within B158DRAFT_2110 at 243.678 kb on - strand, within B158DRAFT_2110 at 243.678 kb on - strand, within B158DRAFT_2110 at 243.678 kb on - strand, within B158DRAFT_2110 at 243.711 kb on + strand, within B158DRAFT_2110 at 243.716 kb on + strand, within B158DRAFT_2110 at 243.716 kb on + strand, within B158DRAFT_2110 at 243.719 kb on - strand, within B158DRAFT_2110 at 243.724 kb on - strand, within B158DRAFT_2110 at 243.759 kb on - strand at 243.780 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 241,580 - B158DRAFT_2108 0.62 +3.5 241,877 - B158DRAFT_2108 0.79 +1.2 241,879 + B158DRAFT_2108 0.79 +1.7 242,360 - -1.2 242,360 - -0.2 242,363 - -2.8 242,387 + -0.8 242,485 - B158DRAFT_2109 0.17 -0.3 242,489 + B158DRAFT_2109 0.18 -2.3 242,497 - B158DRAFT_2109 0.19 +0.7 242,504 - B158DRAFT_2109 0.19 -1.8 242,555 - B158DRAFT_2109 0.25 -0.1 242,590 - B158DRAFT_2109 0.29 -2.0 242,605 + B158DRAFT_2109 0.31 -0.5 242,613 - B158DRAFT_2109 0.32 +4.8 242,629 + B158DRAFT_2109 0.34 -1.1 242,681 + B158DRAFT_2109 0.40 -0.9 242,693 + B158DRAFT_2109 0.41 -0.5 242,725 + B158DRAFT_2109 0.45 -1.5 242,725 + B158DRAFT_2109 0.45 -1.2 242,733 - B158DRAFT_2109 0.46 +1.0 242,733 - B158DRAFT_2109 0.46 -0.9 242,733 - B158DRAFT_2109 0.46 -0.0 242,733 - B158DRAFT_2109 0.46 +0.2 242,754 + B158DRAFT_2109 0.48 +0.8 243,125 - -0.4 243,139 + -1.8 243,174 - +0.7 243,231 - -0.5 243,263 + -0.1 243,368 + B158DRAFT_2110 0.13 -0.5 243,376 - B158DRAFT_2110 0.15 -0.8 243,376 - B158DRAFT_2110 0.15 -0.4 243,415 + B158DRAFT_2110 0.23 -3.3 243,592 - B158DRAFT_2110 0.58 -0.9 243,660 + B158DRAFT_2110 0.72 -1.7 243,669 - B158DRAFT_2110 0.74 +0.4 243,670 + B158DRAFT_2110 0.74 -1.6 243,678 - B158DRAFT_2110 0.76 -1.3 243,678 - B158DRAFT_2110 0.76 +0.6 243,678 - B158DRAFT_2110 0.76 -1.0 243,711 + B158DRAFT_2110 0.82 -0.4 243,716 + B158DRAFT_2110 0.83 -1.3 243,716 + B158DRAFT_2110 0.83 -0.2 243,719 - B158DRAFT_2110 0.84 -1.5 243,724 - B158DRAFT_2110 0.85 -0.7 243,759 - +0.2 243,780 + -1.1
Or see this region's nucleotide sequence