Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2063 and B158DRAFT_2064 are separated by 5 nucleotides B158DRAFT_2064 and B158DRAFT_2065 are separated by 310 nucleotides
B158DRAFT_2063: B158DRAFT_2063 - peptide chain release factor 1, at 198,594 to 199,688
_2063
B158DRAFT_2064: B158DRAFT_2064 - [protein release factor]-glutamine N5-methyltransferase (EC 2.1.1.-), at 199,694 to 200,527
_2064
B158DRAFT_2065: B158DRAFT_2065 - cell shape determining protein, MreB/Mrl family, at 200,838 to 201,881
_2065
Position (kb) 199
200
201 Strain fitness (log2 ratio) -1
0
1
2 at 199.717 kb on + strand at 199.717 kb on + strand at 199.717 kb on + strand at 199.718 kb on + strand at 199.725 kb on - strand at 199.725 kb on - strand at 199.726 kb on - strand at 199.726 kb on - strand at 199.726 kb on - strand at 199.749 kb on + strand at 199.761 kb on - strand at 199.812 kb on - strand, within B158DRAFT_2064 at 199.816 kb on + strand, within B158DRAFT_2064 at 199.832 kb on + strand, within B158DRAFT_2064 at 199.835 kb on - strand, within B158DRAFT_2064 at 199.899 kb on + strand, within B158DRAFT_2064 at 199.965 kb on + strand, within B158DRAFT_2064 at 199.973 kb on - strand, within B158DRAFT_2064 at 200.075 kb on + strand, within B158DRAFT_2064 at 200.083 kb on - strand, within B158DRAFT_2064 at 200.092 kb on + strand, within B158DRAFT_2064 at 200.092 kb on + strand, within B158DRAFT_2064 at 200.100 kb on - strand, within B158DRAFT_2064 at 200.103 kb on + strand, within B158DRAFT_2064 at 200.110 kb on + strand, within B158DRAFT_2064 at 200.110 kb on + strand, within B158DRAFT_2064 at 200.110 kb on + strand, within B158DRAFT_2064 at 200.118 kb on - strand, within B158DRAFT_2064 at 200.118 kb on - strand, within B158DRAFT_2064 at 200.118 kb on - strand, within B158DRAFT_2064 at 200.118 kb on - strand, within B158DRAFT_2064 at 200.118 kb on - strand, within B158DRAFT_2064 at 200.122 kb on + strand, within B158DRAFT_2064 at 200.130 kb on - strand, within B158DRAFT_2064 at 200.155 kb on + strand, within B158DRAFT_2064 at 200.155 kb on + strand, within B158DRAFT_2064 at 200.195 kb on + strand, within B158DRAFT_2064 at 200.195 kb on + strand, within B158DRAFT_2064 at 200.217 kb on + strand, within B158DRAFT_2064 at 200.244 kb on - strand, within B158DRAFT_2064 at 200.256 kb on - strand, within B158DRAFT_2064 at 200.299 kb on - strand, within B158DRAFT_2064 at 200.329 kb on + strand, within B158DRAFT_2064 at 200.337 kb on - strand, within B158DRAFT_2064 at 200.415 kb on + strand, within B158DRAFT_2064 at 200.415 kb on + strand, within B158DRAFT_2064 at 200.415 kb on + strand, within B158DRAFT_2064 at 200.420 kb on + strand, within B158DRAFT_2064 at 200.423 kb on - strand, within B158DRAFT_2064 at 200.423 kb on - strand, within B158DRAFT_2064 at 200.423 kb on - strand, within B158DRAFT_2064 at 200.423 kb on - strand, within B158DRAFT_2064 at 200.423 kb on - strand, within B158DRAFT_2064 at 200.425 kb on + strand, within B158DRAFT_2064 at 200.460 kb on + strand at 200.460 kb on + strand at 200.478 kb on - strand at 200.478 kb on - strand at 200.485 kb on + strand at 200.495 kb on + strand at 200.495 kb on + strand at 200.495 kb on + strand at 200.495 kb on + strand at 200.503 kb on - strand at 200.503 kb on - strand at 200.503 kb on - strand at 200.540 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 199,717 + +0.1 199,717 + -1.7 199,717 + +1.1 199,718 + -0.4 199,725 - +0.0 199,725 - +0.3 199,726 - +0.6 199,726 - -0.2 199,726 - +1.3 199,749 + +1.1 199,761 - +1.9 199,812 - B158DRAFT_2064 0.14 +1.4 199,816 + B158DRAFT_2064 0.15 +1.7 199,832 + B158DRAFT_2064 0.17 +0.4 199,835 - B158DRAFT_2064 0.17 +0.8 199,899 + B158DRAFT_2064 0.25 +1.8 199,965 + B158DRAFT_2064 0.32 +0.1 199,973 - B158DRAFT_2064 0.33 +0.8 200,075 + B158DRAFT_2064 0.46 +1.9 200,083 - B158DRAFT_2064 0.47 -0.9 200,092 + B158DRAFT_2064 0.48 -0.3 200,092 + B158DRAFT_2064 0.48 +1.0 200,100 - B158DRAFT_2064 0.49 -0.7 200,103 + B158DRAFT_2064 0.49 -0.5 200,110 + B158DRAFT_2064 0.50 +1.0 200,110 + B158DRAFT_2064 0.50 +1.6 200,110 + B158DRAFT_2064 0.50 +1.5 200,118 - B158DRAFT_2064 0.51 -0.4 200,118 - B158DRAFT_2064 0.51 -1.7 200,118 - B158DRAFT_2064 0.51 +0.2 200,118 - B158DRAFT_2064 0.51 +1.0 200,118 - B158DRAFT_2064 0.51 +1.5 200,122 + B158DRAFT_2064 0.51 +1.4 200,130 - B158DRAFT_2064 0.52 +0.6 200,155 + B158DRAFT_2064 0.55 +1.0 200,155 + B158DRAFT_2064 0.55 +1.1 200,195 + B158DRAFT_2064 0.60 +1.1 200,195 + B158DRAFT_2064 0.60 +0.9 200,217 + B158DRAFT_2064 0.63 -1.0 200,244 - B158DRAFT_2064 0.66 +0.1 200,256 - B158DRAFT_2064 0.67 +0.9 200,299 - B158DRAFT_2064 0.73 +0.6 200,329 + B158DRAFT_2064 0.76 +0.4 200,337 - B158DRAFT_2064 0.77 +0.1 200,415 + B158DRAFT_2064 0.86 +0.3 200,415 + B158DRAFT_2064 0.86 -0.1 200,415 + B158DRAFT_2064 0.86 +0.4 200,420 + B158DRAFT_2064 0.87 +1.0 200,423 - B158DRAFT_2064 0.87 -0.2 200,423 - B158DRAFT_2064 0.87 +1.4 200,423 - B158DRAFT_2064 0.87 +1.1 200,423 - B158DRAFT_2064 0.87 +0.5 200,423 - B158DRAFT_2064 0.87 -0.9 200,425 + B158DRAFT_2064 0.88 +0.1 200,460 + -1.5 200,460 + +1.5 200,478 - +0.7 200,478 - +0.8 200,485 + +2.1 200,495 + +0.3 200,495 + +0.2 200,495 + +0.8 200,495 + +0.3 200,503 - +0.5 200,503 - -0.1 200,503 - +0.8 200,540 - -0.1
Or see this region's nucleotide sequence