Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2026 and B158DRAFT_2027 are separated by 498 nucleotides B158DRAFT_2027 and B158DRAFT_2028 are separated by 54 nucleotides B158DRAFT_2028 and B158DRAFT_2029 are separated by 57 nucleotides
B158DRAFT_2026: B158DRAFT_2026 - Uncharacterized protein conserved in bacteria, at 155,530 to 156,549
_2026
B158DRAFT_2027: B158DRAFT_2027 - RNA polymerase sigma factor, sigma-70 family, at 157,048 to 157,572
_2027
B158DRAFT_2028: B158DRAFT_2028 - hypothetical protein, at 157,627 to 158,199
_2028
B158DRAFT_2029: B158DRAFT_2029 - Inorganic pyrophosphatase, at 158,257 to 158,787
_2029
Position (kb) 157
158 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 156.115 kb on - strand, within B158DRAFT_2026 at 156.151 kb on - strand, within B158DRAFT_2026 at 156.169 kb on - strand, within B158DRAFT_2026 at 156.187 kb on + strand, within B158DRAFT_2026 at 156.192 kb on + strand, within B158DRAFT_2026 at 156.195 kb on - strand, within B158DRAFT_2026 at 156.203 kb on + strand, within B158DRAFT_2026 at 156.211 kb on - strand, within B158DRAFT_2026 at 156.213 kb on + strand, within B158DRAFT_2026 at 156.213 kb on + strand, within B158DRAFT_2026 at 156.213 kb on - strand, within B158DRAFT_2026 at 156.225 kb on - strand, within B158DRAFT_2026 at 156.240 kb on + strand, within B158DRAFT_2026 at 156.251 kb on + strand, within B158DRAFT_2026 at 156.252 kb on - strand, within B158DRAFT_2026 at 156.296 kb on + strand, within B158DRAFT_2026 at 156.408 kb on + strand, within B158DRAFT_2026 at 156.477 kb on + strand at 156.483 kb on - strand at 156.485 kb on - strand at 156.542 kb on - strand at 156.663 kb on - strand at 156.696 kb on + strand at 156.704 kb on + strand at 156.704 kb on + strand at 156.704 kb on + strand at 156.704 kb on + strand at 156.704 kb on + strand at 156.704 kb on + strand at 156.704 kb on + strand at 156.712 kb on - strand at 156.712 kb on - strand at 156.712 kb on - strand at 156.712 kb on - strand at 156.712 kb on - strand at 156.734 kb on + strand at 156.748 kb on + strand at 156.756 kb on + strand at 156.756 kb on + strand at 156.764 kb on - strand at 156.804 kb on + strand at 156.816 kb on + strand at 156.826 kb on + strand at 156.826 kb on + strand at 156.931 kb on + strand at 156.939 kb on - strand at 157.005 kb on - strand at 157.007 kb on - strand at 157.022 kb on - strand at 157.038 kb on - strand at 157.043 kb on - strand at 157.215 kb on + strand, within B158DRAFT_2027 at 157.295 kb on + strand, within B158DRAFT_2027 at 157.295 kb on + strand, within B158DRAFT_2027 at 157.368 kb on + strand, within B158DRAFT_2027 at 157.431 kb on + strand, within B158DRAFT_2027 at 157.439 kb on - strand, within B158DRAFT_2027 at 157.439 kb on - strand, within B158DRAFT_2027 at 157.460 kb on - strand, within B158DRAFT_2027 at 157.503 kb on + strand, within B158DRAFT_2027 at 157.515 kb on + strand, within B158DRAFT_2027 at 157.515 kb on + strand, within B158DRAFT_2027 at 157.520 kb on + strand at 157.523 kb on - strand at 157.525 kb on + strand at 157.525 kb on + strand at 157.525 kb on + strand at 157.533 kb on - strand at 157.543 kb on - strand at 157.550 kb on + strand at 157.705 kb on - strand, within B158DRAFT_2028 at 157.840 kb on + strand, within B158DRAFT_2028 at 157.840 kb on + strand, within B158DRAFT_2028 at 157.840 kb on + strand, within B158DRAFT_2028 at 157.848 kb on - strand, within B158DRAFT_2028 at 157.853 kb on + strand, within B158DRAFT_2028 at 157.910 kb on - strand, within B158DRAFT_2028 at 157.951 kb on + strand, within B158DRAFT_2028 at 157.995 kb on + strand, within B158DRAFT_2028 at 157.995 kb on + strand, within B158DRAFT_2028 at 158.003 kb on - strand, within B158DRAFT_2028 at 158.003 kb on - strand, within B158DRAFT_2028 at 158.028 kb on + strand, within B158DRAFT_2028 at 158.036 kb on - strand, within B158DRAFT_2028 at 158.036 kb on - strand, within B158DRAFT_2028 at 158.036 kb on - strand, within B158DRAFT_2028 at 158.042 kb on - strand, within B158DRAFT_2028 at 158.047 kb on - strand, within B158DRAFT_2028 at 158.047 kb on - strand, within B158DRAFT_2028 at 158.047 kb on - strand, within B158DRAFT_2028 at 158.076 kb on + strand, within B158DRAFT_2028 at 158.094 kb on + strand, within B158DRAFT_2028 at 158.113 kb on - strand, within B158DRAFT_2028 at 158.149 kb on + strand at 158.282 kb on - strand at 158.282 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 156,115 - B158DRAFT_2026 0.57 +0.3 156,151 - B158DRAFT_2026 0.61 -0.2 156,169 - B158DRAFT_2026 0.63 +0.2 156,187 + B158DRAFT_2026 0.64 -1.5 156,192 + B158DRAFT_2026 0.65 -1.4 156,195 - B158DRAFT_2026 0.65 -1.0 156,203 + B158DRAFT_2026 0.66 -1.0 156,211 - B158DRAFT_2026 0.67 -0.2 156,213 + B158DRAFT_2026 0.67 -1.4 156,213 + B158DRAFT_2026 0.67 +1.4 156,213 - B158DRAFT_2026 0.67 -2.2 156,225 - B158DRAFT_2026 0.68 -0.1 156,240 + B158DRAFT_2026 0.70 +0.6 156,251 + B158DRAFT_2026 0.71 +0.7 156,252 - B158DRAFT_2026 0.71 +0.2 156,296 + B158DRAFT_2026 0.75 -1.0 156,408 + B158DRAFT_2026 0.86 -1.7 156,477 + -1.8 156,483 - -2.6 156,485 - +1.3 156,542 - -1.1 156,663 - -1.3 156,696 + -0.4 156,704 + -1.5 156,704 + -0.4 156,704 + +0.4 156,704 + -1.3 156,704 + -1.2 156,704 + -0.5 156,704 + -0.9 156,712 - -1.9 156,712 - +0.2 156,712 - -3.4 156,712 - -2.2 156,712 - -0.8 156,734 + -1.0 156,748 + -2.7 156,756 + -0.0 156,756 + -0.4 156,764 - -1.9 156,804 + +0.4 156,816 + +0.5 156,826 + -1.1 156,826 + -0.8 156,931 + -1.1 156,939 - +0.8 157,005 - -0.4 157,007 - -0.0 157,022 - -0.5 157,038 - -0.9 157,043 - +1.2 157,215 + B158DRAFT_2027 0.32 -0.5 157,295 + B158DRAFT_2027 0.47 +2.7 157,295 + B158DRAFT_2027 0.47 -0.4 157,368 + B158DRAFT_2027 0.61 -1.3 157,431 + B158DRAFT_2027 0.73 -1.2 157,439 - B158DRAFT_2027 0.74 -0.8 157,439 - B158DRAFT_2027 0.74 -1.6 157,460 - B158DRAFT_2027 0.78 +1.1 157,503 + B158DRAFT_2027 0.87 +1.2 157,515 + B158DRAFT_2027 0.89 -1.1 157,515 + B158DRAFT_2027 0.89 -0.6 157,520 + +0.7 157,523 - +0.8 157,525 + -0.3 157,525 + -0.6 157,525 + +0.0 157,533 - -1.5 157,543 - -1.0 157,550 + -0.4 157,705 - B158DRAFT_2028 0.14 -1.1 157,840 + B158DRAFT_2028 0.37 +1.5 157,840 + B158DRAFT_2028 0.37 +2.2 157,840 + B158DRAFT_2028 0.37 +0.8 157,848 - B158DRAFT_2028 0.39 +3.5 157,853 + B158DRAFT_2028 0.39 +2.5 157,910 - B158DRAFT_2028 0.49 +1.5 157,951 + B158DRAFT_2028 0.57 +1.7 157,995 + B158DRAFT_2028 0.64 +0.8 157,995 + B158DRAFT_2028 0.64 -0.1 158,003 - B158DRAFT_2028 0.66 +1.2 158,003 - B158DRAFT_2028 0.66 -1.5 158,028 + B158DRAFT_2028 0.70 -0.9 158,036 - B158DRAFT_2028 0.71 +3.7 158,036 - B158DRAFT_2028 0.71 +0.3 158,036 - B158DRAFT_2028 0.71 +0.9 158,042 - B158DRAFT_2028 0.72 +0.8 158,047 - B158DRAFT_2028 0.73 +3.8 158,047 - B158DRAFT_2028 0.73 +3.3 158,047 - B158DRAFT_2028 0.73 -0.7 158,076 + B158DRAFT_2028 0.78 +0.0 158,094 + B158DRAFT_2028 0.82 -0.5 158,113 - B158DRAFT_2028 0.85 -0.7 158,149 + +0.4 158,282 - -0.5 158,282 - -1.1
Or see this region's nucleotide sequence