Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2021

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2019 and B158DRAFT_2020 are separated by 109 nucleotidesB158DRAFT_2020 and B158DRAFT_2021 are separated by 27 nucleotidesB158DRAFT_2021 and B158DRAFT_2022 are separated by 439 nucleotides B158DRAFT_2019: B158DRAFT_2019 - hypothetical protein, at 148,346 to 149,326 _2019 B158DRAFT_2020: B158DRAFT_2020 - Polyketide cyclase / dehydrase and lipid transport., at 149,436 to 149,975 _2020 B158DRAFT_2021: B158DRAFT_2021 - Outer membrane phospholipase A, at 150,003 to 151,283 _2021 B158DRAFT_2022: B158DRAFT_2022 - Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases, at 151,723 to 153,150 _2022 Position (kb) 150 151 152Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5at 149.134 kb on + strand, within B158DRAFT_2019at 149.134 kb on + strand, within B158DRAFT_2019at 149.134 kb on + strand, within B158DRAFT_2019at 149.134 kb on + strand, within B158DRAFT_2019at 149.134 kb on + strand, within B158DRAFT_2019at 149.134 kb on + strand, within B158DRAFT_2019at 149.142 kb on - strand, within B158DRAFT_2019at 149.142 kb on - strand, within B158DRAFT_2019at 149.142 kb on - strand, within B158DRAFT_2019at 149.225 kb on + strand, within B158DRAFT_2019at 149.247 kb on - strandat 149.247 kb on - strandat 149.269 kb on + strandat 149.288 kb on - strandat 149.336 kb on + strandat 149.336 kb on + strandat 149.336 kb on + strandat 149.336 kb on + strandat 149.344 kb on - strandat 149.344 kb on - strandat 149.344 kb on - strandat 149.344 kb on - strandat 149.344 kb on - strandat 149.344 kb on - strandat 149.544 kb on - strand, within B158DRAFT_2020at 149.553 kb on + strand, within B158DRAFT_2020at 149.553 kb on + strand, within B158DRAFT_2020at 149.573 kb on - strand, within B158DRAFT_2020at 149.641 kb on + strand, within B158DRAFT_2020at 149.652 kb on + strand, within B158DRAFT_2020at 149.657 kb on + strand, within B158DRAFT_2020at 149.664 kb on + strand, within B158DRAFT_2020at 149.710 kb on + strand, within B158DRAFT_2020at 149.844 kb on + strand, within B158DRAFT_2020at 149.852 kb on - strand, within B158DRAFT_2020at 149.892 kb on + strand, within B158DRAFT_2020at 149.909 kb on + strand, within B158DRAFT_2020at 149.909 kb on + strand, within B158DRAFT_2020at 149.914 kb on - strand, within B158DRAFT_2020at 149.961 kb on + strandat 149.964 kb on + strandat 149.969 kb on - strandat 149.969 kb on - strandat 149.989 kb on - strandat 150.007 kb on + strandat 150.124 kb on + strandat 150.133 kb on - strand, within B158DRAFT_2021at 150.142 kb on + strand, within B158DRAFT_2021at 150.266 kb on - strand, within B158DRAFT_2021at 150.268 kb on + strand, within B158DRAFT_2021at 150.276 kb on - strand, within B158DRAFT_2021at 150.355 kb on + strand, within B158DRAFT_2021at 150.363 kb on - strand, within B158DRAFT_2021at 150.363 kb on - strand, within B158DRAFT_2021at 150.448 kb on + strand, within B158DRAFT_2021at 150.453 kb on + strand, within B158DRAFT_2021at 150.456 kb on - strand, within B158DRAFT_2021at 150.463 kb on + strand, within B158DRAFT_2021at 150.471 kb on - strand, within B158DRAFT_2021at 150.490 kb on + strand, within B158DRAFT_2021at 150.717 kb on - strand, within B158DRAFT_2021at 150.732 kb on + strand, within B158DRAFT_2021at 150.732 kb on + strand, within B158DRAFT_2021at 150.739 kb on + strand, within B158DRAFT_2021at 150.744 kb on + strand, within B158DRAFT_2021at 150.744 kb on + strand, within B158DRAFT_2021at 150.744 kb on + strand, within B158DRAFT_2021at 150.744 kb on + strand, within B158DRAFT_2021at 150.747 kb on - strand, within B158DRAFT_2021at 150.747 kb on - strand, within B158DRAFT_2021at 150.752 kb on - strand, within B158DRAFT_2021at 150.847 kb on - strand, within B158DRAFT_2021at 150.871 kb on - strand, within B158DRAFT_2021at 150.879 kb on + strand, within B158DRAFT_2021at 150.887 kb on - strand, within B158DRAFT_2021at 150.935 kb on + strand, within B158DRAFT_2021at 150.940 kb on + strand, within B158DRAFT_2021at 150.940 kb on + strand, within B158DRAFT_2021at 150.940 kb on + strand, within B158DRAFT_2021at 150.948 kb on - strand, within B158DRAFT_2021at 150.948 kb on - strand, within B158DRAFT_2021at 150.948 kb on - strand, within B158DRAFT_2021at 150.948 kb on - strand, within B158DRAFT_2021at 150.950 kb on + strand, within B158DRAFT_2021at 150.950 kb on + strand, within B158DRAFT_2021at 150.950 kb on + strand, within B158DRAFT_2021at 150.958 kb on - strand, within B158DRAFT_2021at 150.958 kb on - strand, within B158DRAFT_2021at 150.958 kb on - strand, within B158DRAFT_2021at 150.958 kb on - strand, within B158DRAFT_2021at 150.958 kb on - strand, within B158DRAFT_2021at 150.958 kb on - strand, within B158DRAFT_2021at 150.990 kb on + strand, within B158DRAFT_2021at 151.009 kb on - strand, within B158DRAFT_2021at 151.085 kb on - strand, within B158DRAFT_2021at 151.089 kb on + strand, within B158DRAFT_2021at 151.100 kb on - strand, within B158DRAFT_2021at 151.137 kb on + strand, within B158DRAFT_2021at 151.137 kb on + strand, within B158DRAFT_2021at 151.142 kb on + strand, within B158DRAFT_2021at 151.143 kb on + strand, within B158DRAFT_2021at 151.150 kb on - strand, within B158DRAFT_2021at 151.218 kb on - strandat 151.218 kb on - strandat 151.224 kb on + strandat 151.246 kb on + strandat 151.266 kb on - strandat 151.364 kb on + strandat 151.377 kb on - strandat 151.386 kb on + strandat 151.386 kb on + strandat 151.394 kb on - strandat 151.517 kb on - strandat 151.576 kb on + strandat 151.590 kb on + strandat 151.668 kb on - strandat 151.706 kb on - strandat 151.723 kb on - strandat 151.724 kb on - strandat 151.724 kb on - strandat 151.829 kb on + strandat 151.855 kb on - strandat 151.886 kb on + strand, within B158DRAFT_2022at 151.928 kb on + strand, within B158DRAFT_2022at 151.971 kb on - strand, within B158DRAFT_2022at 152.053 kb on + strand, within B158DRAFT_2022at 152.110 kb on - strand, within B158DRAFT_2022at 152.195 kb on + strand, within B158DRAFT_2022

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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149,134 + B158DRAFT_2019 0.80 -1.1
149,134 + B158DRAFT_2019 0.80 -0.5
149,134 + B158DRAFT_2019 0.80 +0.2
149,134 + B158DRAFT_2019 0.80 -1.1
149,134 + B158DRAFT_2019 0.80 -1.7
149,134 + B158DRAFT_2019 0.80 +0.8
149,142 - B158DRAFT_2019 0.81 -0.0
149,142 - B158DRAFT_2019 0.81 +0.1
149,142 - B158DRAFT_2019 0.81 -1.1
149,225 + B158DRAFT_2019 0.90 -1.3
149,247 - -0.7
149,247 - -1.7
149,269 + +0.5
149,288 - -0.4
149,336 + -0.6
149,336 + +0.3
149,336 + -0.3
149,336 + -1.2
149,344 - +0.5
149,344 - -0.3
149,344 - -0.8
149,344 - +3.2
149,344 - -0.7
149,344 - +1.8
149,544 - B158DRAFT_2020 0.20 -0.7
149,553 + B158DRAFT_2020 0.22 -1.4
149,553 + B158DRAFT_2020 0.22 +0.1
149,573 - B158DRAFT_2020 0.25 -1.3
149,641 + B158DRAFT_2020 0.38 -0.8
149,652 + B158DRAFT_2020 0.40 +0.5
149,657 + B158DRAFT_2020 0.41 -0.5
149,664 + B158DRAFT_2020 0.42 -1.3
149,710 + B158DRAFT_2020 0.51 -2.6
149,844 + B158DRAFT_2020 0.76 +1.0
149,852 - B158DRAFT_2020 0.77 -0.3
149,892 + B158DRAFT_2020 0.84 -1.0
149,909 + B158DRAFT_2020 0.88 +1.3
149,909 + B158DRAFT_2020 0.88 -0.9
149,914 - B158DRAFT_2020 0.89 -0.5
149,961 + -0.9
149,964 + +1.2
149,969 - -0.7
149,969 - -1.3
149,989 - -0.9
150,007 + -1.0
150,124 + -0.3
150,133 - B158DRAFT_2021 0.10 -0.9
150,142 + B158DRAFT_2021 0.11 -1.1
150,266 - B158DRAFT_2021 0.21 -1.0
150,268 + B158DRAFT_2021 0.21 -0.9
150,276 - B158DRAFT_2021 0.21 -0.0
150,355 + B158DRAFT_2021 0.27 -2.1
150,363 - B158DRAFT_2021 0.28 -0.7
150,363 - B158DRAFT_2021 0.28 +1.2
150,448 + B158DRAFT_2021 0.35 -1.4
150,453 + B158DRAFT_2021 0.35 -2.0
150,456 - B158DRAFT_2021 0.35 -1.1
150,463 + B158DRAFT_2021 0.36 -0.6
150,471 - B158DRAFT_2021 0.37 -1.3
150,490 + B158DRAFT_2021 0.38 +0.1
150,717 - B158DRAFT_2021 0.56 -0.9
150,732 + B158DRAFT_2021 0.57 +0.3
150,732 + B158DRAFT_2021 0.57 -1.0
150,739 + B158DRAFT_2021 0.57 +2.8
150,744 + B158DRAFT_2021 0.58 -1.5
150,744 + B158DRAFT_2021 0.58 -0.2
150,744 + B158DRAFT_2021 0.58 -2.5
150,744 + B158DRAFT_2021 0.58 -0.9
150,747 - B158DRAFT_2021 0.58 -0.3
150,747 - B158DRAFT_2021 0.58 -1.6
150,752 - B158DRAFT_2021 0.58 -1.9
150,847 - B158DRAFT_2021 0.66 -1.1
150,871 - B158DRAFT_2021 0.68 -0.8
150,879 + B158DRAFT_2021 0.68 +0.3
150,887 - B158DRAFT_2021 0.69 +2.8
150,935 + B158DRAFT_2021 0.73 +0.1
150,940 + B158DRAFT_2021 0.73 -0.0
150,940 + B158DRAFT_2021 0.73 -1.8
150,940 + B158DRAFT_2021 0.73 +0.5
150,948 - B158DRAFT_2021 0.74 -0.8
150,948 - B158DRAFT_2021 0.74 +0.4
150,948 - B158DRAFT_2021 0.74 +1.2
150,948 - B158DRAFT_2021 0.74 -2.0
150,950 + B158DRAFT_2021 0.74 +0.3
150,950 + B158DRAFT_2021 0.74 +0.7
150,950 + B158DRAFT_2021 0.74 -1.7
150,958 - B158DRAFT_2021 0.75 -1.6
150,958 - B158DRAFT_2021 0.75 -1.8
150,958 - B158DRAFT_2021 0.75 -1.5
150,958 - B158DRAFT_2021 0.75 -1.6
150,958 - B158DRAFT_2021 0.75 +0.1
150,958 - B158DRAFT_2021 0.75 -1.6
150,990 + B158DRAFT_2021 0.77 -2.7
151,009 - B158DRAFT_2021 0.79 -1.1
151,085 - B158DRAFT_2021 0.84 -0.0
151,089 + B158DRAFT_2021 0.85 -1.9
151,100 - B158DRAFT_2021 0.86 +0.7
151,137 + B158DRAFT_2021 0.89 -2.1
151,137 + B158DRAFT_2021 0.89 +0.1
151,142 + B158DRAFT_2021 0.89 -0.8
151,143 + B158DRAFT_2021 0.89 +0.1
151,150 - B158DRAFT_2021 0.90 -0.8
151,218 - +0.4
151,218 - -2.7
151,224 + -0.6
151,246 + +3.2
151,266 - +0.3
151,364 + -0.7
151,377 - -1.7
151,386 + -0.9
151,386 + +0.9
151,394 - -0.4
151,517 - +1.1
151,576 + +2.3
151,590 + +1.1
151,668 - -0.1
151,706 - +1.9
151,723 - +5.2
151,724 - +0.2
151,724 - -0.8
151,829 + -0.0
151,855 - -0.0
151,886 + B158DRAFT_2022 0.11 -0.3
151,928 + B158DRAFT_2022 0.14 +0.6
151,971 - B158DRAFT_2022 0.17 +0.7
152,053 + B158DRAFT_2022 0.23 -0.8
152,110 - B158DRAFT_2022 0.27 +0.1
152,195 + B158DRAFT_2022 0.33 -0.3

Or see this region's nucleotide sequence