Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1987 and B158DRAFT_1988 are separated by 105 nucleotides B158DRAFT_1988 and B158DRAFT_1989 are separated by 145 nucleotides
B158DRAFT_1987: B158DRAFT_1987 - D-alpha,beta-D-heptose 7-phosphate 1-kinase (EC 2.7.1.167)/D-beta-D-heptose 1-phosphate adenylyltransferase (EC 2.7.7.70), at 122,390 to 123,853
_1987
B158DRAFT_1988: B158DRAFT_1988 - hypothetical protein, at 123,959 to 124,249
_1988
B158DRAFT_1989: B158DRAFT_1989 - ribonuclease R, at 124,395 to 126,809
_1989
Position (kb) 123
124
125 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 122.967 kb on - strand, within B158DRAFT_1987 at 122.974 kb on + strand, within B158DRAFT_1987 at 122.974 kb on + strand, within B158DRAFT_1987 at 122.999 kb on + strand, within B158DRAFT_1987 at 122.999 kb on + strand, within B158DRAFT_1987 at 122.999 kb on + strand, within B158DRAFT_1987 at 123.007 kb on - strand, within B158DRAFT_1987 at 123.007 kb on - strand, within B158DRAFT_1987 at 123.030 kb on - strand, within B158DRAFT_1987 at 123.044 kb on + strand, within B158DRAFT_1987 at 123.052 kb on - strand, within B158DRAFT_1987 at 123.098 kb on + strand, within B158DRAFT_1987 at 123.155 kb on - strand, within B158DRAFT_1987 at 123.234 kb on - strand, within B158DRAFT_1987 at 123.264 kb on - strand, within B158DRAFT_1987 at 123.265 kb on + strand, within B158DRAFT_1987 at 123.273 kb on - strand, within B158DRAFT_1987 at 123.366 kb on - strand, within B158DRAFT_1987 at 123.394 kb on + strand, within B158DRAFT_1987 at 123.402 kb on - strand, within B158DRAFT_1987 at 123.404 kb on - strand, within B158DRAFT_1987 at 123.406 kb on + strand, within B158DRAFT_1987 at 123.406 kb on + strand, within B158DRAFT_1987 at 123.406 kb on + strand, within B158DRAFT_1987 at 123.406 kb on + strand, within B158DRAFT_1987 at 123.406 kb on + strand, within B158DRAFT_1987 at 123.406 kb on + strand, within B158DRAFT_1987 at 123.406 kb on + strand, within B158DRAFT_1987 at 123.406 kb on + strand, within B158DRAFT_1987 at 123.406 kb on + strand, within B158DRAFT_1987 at 123.406 kb on + strand, within B158DRAFT_1987 at 123.406 kb on + strand, within B158DRAFT_1987 at 123.413 kb on + strand, within B158DRAFT_1987 at 123.414 kb on - strand, within B158DRAFT_1987 at 123.414 kb on - strand, within B158DRAFT_1987 at 123.414 kb on - strand, within B158DRAFT_1987 at 123.414 kb on - strand, within B158DRAFT_1987 at 123.414 kb on - strand, within B158DRAFT_1987 at 123.414 kb on - strand, within B158DRAFT_1987 at 123.414 kb on - strand, within B158DRAFT_1987 at 123.414 kb on - strand, within B158DRAFT_1987 at 123.418 kb on + strand, within B158DRAFT_1987 at 123.461 kb on - strand, within B158DRAFT_1987 at 123.503 kb on + strand, within B158DRAFT_1987 at 123.503 kb on + strand, within B158DRAFT_1987 at 123.503 kb on + strand, within B158DRAFT_1987 at 123.503 kb on + strand, within B158DRAFT_1987 at 123.503 kb on + strand, within B158DRAFT_1987 at 123.511 kb on - strand, within B158DRAFT_1987 at 123.511 kb on - strand, within B158DRAFT_1987 at 123.511 kb on - strand, within B158DRAFT_1987 at 123.547 kb on - strand, within B158DRAFT_1987 at 123.581 kb on + strand, within B158DRAFT_1987 at 123.581 kb on + strand, within B158DRAFT_1987 at 123.581 kb on + strand, within B158DRAFT_1987 at 123.606 kb on - strand, within B158DRAFT_1987 at 123.637 kb on + strand, within B158DRAFT_1987 at 123.727 kb on + strand at 123.796 kb on + strand at 123.909 kb on + strand at 123.909 kb on + strand at 123.909 kb on + strand at 123.909 kb on + strand at 123.909 kb on + strand at 123.909 kb on + strand at 123.917 kb on - strand at 123.917 kb on - strand at 123.917 kb on - strand at 123.917 kb on - strand at 123.917 kb on - strand at 123.933 kb on - strand at 124.007 kb on + strand, within B158DRAFT_1988 at 124.007 kb on + strand, within B158DRAFT_1988 at 124.007 kb on + strand, within B158DRAFT_1988 at 124.007 kb on + strand, within B158DRAFT_1988 at 124.007 kb on + strand, within B158DRAFT_1988 at 124.007 kb on + strand, within B158DRAFT_1988 at 124.007 kb on + strand, within B158DRAFT_1988 at 124.015 kb on - strand, within B158DRAFT_1988 at 124.015 kb on - strand, within B158DRAFT_1988 at 124.015 kb on - strand, within B158DRAFT_1988 at 124.015 kb on - strand, within B158DRAFT_1988 at 124.015 kb on - strand, within B158DRAFT_1988 at 124.015 kb on - strand, within B158DRAFT_1988 at 124.015 kb on - strand, within B158DRAFT_1988 at 124.015 kb on - strand, within B158DRAFT_1988 at 124.015 kb on - strand, within B158DRAFT_1988 at 124.015 kb on - strand, within B158DRAFT_1988 at 124.015 kb on - strand, within B158DRAFT_1988 at 124.015 kb on - strand, within B158DRAFT_1988 at 124.061 kb on + strand, within B158DRAFT_1988 at 124.069 kb on - strand, within B158DRAFT_1988 at 124.074 kb on + strand, within B158DRAFT_1988 at 124.082 kb on - strand, within B158DRAFT_1988 at 124.089 kb on + strand, within B158DRAFT_1988 at 124.092 kb on - strand, within B158DRAFT_1988 at 124.119 kb on + strand, within B158DRAFT_1988 at 124.128 kb on + strand, within B158DRAFT_1988 at 124.132 kb on - strand, within B158DRAFT_1988 at 124.137 kb on - strand, within B158DRAFT_1988 at 124.173 kb on + strand, within B158DRAFT_1988 at 124.173 kb on + strand, within B158DRAFT_1988 at 124.173 kb on + strand, within B158DRAFT_1988 at 124.173 kb on + strand, within B158DRAFT_1988 at 124.173 kb on + strand, within B158DRAFT_1988 at 124.181 kb on - strand, within B158DRAFT_1988 at 124.181 kb on - strand, within B158DRAFT_1988 at 124.181 kb on - strand, within B158DRAFT_1988 at 124.181 kb on - strand, within B158DRAFT_1988 at 124.181 kb on - strand, within B158DRAFT_1988 at 124.219 kb on + strand, within B158DRAFT_1988 at 124.251 kb on - strand at 124.297 kb on + strand at 124.349 kb on - strand at 124.359 kb on + strand at 124.418 kb on + strand at 124.426 kb on - strand at 124.426 kb on - strand at 124.454 kb on + strand at 124.494 kb on - strand at 124.494 kb on - strand at 124.513 kb on + strand at 124.521 kb on - strand at 124.521 kb on - strand at 124.542 kb on - strand at 124.549 kb on + strand at 124.549 kb on + strand at 124.549 kb on + strand at 124.549 kb on + strand at 124.549 kb on + strand at 124.554 kb on + strand at 124.557 kb on - strand at 124.557 kb on - strand at 124.559 kb on + strand at 124.559 kb on + strand at 124.559 kb on + strand at 124.562 kb on - strand at 124.567 kb on - strand at 124.586 kb on - strand at 124.626 kb on + strand at 124.636 kb on - strand at 124.768 kb on + strand, within B158DRAFT_1989 at 124.860 kb on + strand, within B158DRAFT_1989 at 125.097 kb on + strand, within B158DRAFT_1989 at 125.213 kb on - strand, within B158DRAFT_1989 at 125.213 kb on - strand, within B158DRAFT_1989 at 125.239 kb on + strand, within B158DRAFT_1989 at 125.247 kb on - strand, within B158DRAFT_1989
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 122,967 - B158DRAFT_1987 0.39 +1.6 122,974 + B158DRAFT_1987 0.40 +0.5 122,974 + B158DRAFT_1987 0.40 -2.0 122,999 + B158DRAFT_1987 0.42 +1.2 122,999 + B158DRAFT_1987 0.42 -0.1 122,999 + B158DRAFT_1987 0.42 -0.3 123,007 - B158DRAFT_1987 0.42 -0.3 123,007 - B158DRAFT_1987 0.42 +1.5 123,030 - B158DRAFT_1987 0.44 +0.0 123,044 + B158DRAFT_1987 0.45 -0.1 123,052 - B158DRAFT_1987 0.45 +1.6 123,098 + B158DRAFT_1987 0.48 -0.2 123,155 - B158DRAFT_1987 0.52 -0.2 123,234 - B158DRAFT_1987 0.58 -0.6 123,264 - B158DRAFT_1987 0.60 +3.9 123,265 + B158DRAFT_1987 0.60 -1.1 123,273 - B158DRAFT_1987 0.60 +1.5 123,366 - B158DRAFT_1987 0.67 -0.3 123,394 + B158DRAFT_1987 0.69 +0.4 123,402 - B158DRAFT_1987 0.69 +0.3 123,404 - B158DRAFT_1987 0.69 +0.1 123,406 + B158DRAFT_1987 0.69 +1.2 123,406 + B158DRAFT_1987 0.69 +1.5 123,406 + B158DRAFT_1987 0.69 -0.1 123,406 + B158DRAFT_1987 0.69 -0.9 123,406 + B158DRAFT_1987 0.69 -0.3 123,406 + B158DRAFT_1987 0.69 +0.7 123,406 + B158DRAFT_1987 0.69 +0.8 123,406 + B158DRAFT_1987 0.69 +0.3 123,406 + B158DRAFT_1987 0.69 +0.7 123,406 + B158DRAFT_1987 0.69 +0.5 123,406 + B158DRAFT_1987 0.69 +1.1 123,413 + B158DRAFT_1987 0.70 -0.2 123,414 - B158DRAFT_1987 0.70 -0.1 123,414 - B158DRAFT_1987 0.70 -0.2 123,414 - B158DRAFT_1987 0.70 +1.8 123,414 - B158DRAFT_1987 0.70 +0.6 123,414 - B158DRAFT_1987 0.70 +0.4 123,414 - B158DRAFT_1987 0.70 +1.4 123,414 - B158DRAFT_1987 0.70 -0.4 123,414 - B158DRAFT_1987 0.70 +1.1 123,418 + B158DRAFT_1987 0.70 -0.1 123,461 - B158DRAFT_1987 0.73 +0.3 123,503 + B158DRAFT_1987 0.76 +0.4 123,503 + B158DRAFT_1987 0.76 -0.5 123,503 + B158DRAFT_1987 0.76 -0.1 123,503 + B158DRAFT_1987 0.76 -0.9 123,503 + B158DRAFT_1987 0.76 -0.9 123,511 - B158DRAFT_1987 0.77 +3.5 123,511 - B158DRAFT_1987 0.77 +2.9 123,511 - B158DRAFT_1987 0.77 +1.9 123,547 - B158DRAFT_1987 0.79 +1.6 123,581 + B158DRAFT_1987 0.81 +0.5 123,581 + B158DRAFT_1987 0.81 +0.5 123,581 + B158DRAFT_1987 0.81 -0.4 123,606 - B158DRAFT_1987 0.83 -0.0 123,637 + B158DRAFT_1987 0.85 +2.2 123,727 + +1.3 123,796 + +0.1 123,909 + +0.5 123,909 + -1.4 123,909 + -0.0 123,909 + -1.4 123,909 + -1.1 123,909 + -0.6 123,917 - -2.5 123,917 - -1.2 123,917 - -0.6 123,917 - +1.0 123,917 - -1.2 123,933 - +1.5 124,007 + B158DRAFT_1988 0.16 +0.9 124,007 + B158DRAFT_1988 0.16 -1.0 124,007 + B158DRAFT_1988 0.16 -0.7 124,007 + B158DRAFT_1988 0.16 -1.9 124,007 + B158DRAFT_1988 0.16 -0.5 124,007 + B158DRAFT_1988 0.16 -0.9 124,007 + B158DRAFT_1988 0.16 -2.2 124,015 - B158DRAFT_1988 0.19 -1.3 124,015 - B158DRAFT_1988 0.19 +0.7 124,015 - B158DRAFT_1988 0.19 +1.0 124,015 - B158DRAFT_1988 0.19 -0.2 124,015 - B158DRAFT_1988 0.19 -0.7 124,015 - B158DRAFT_1988 0.19 -1.4 124,015 - B158DRAFT_1988 0.19 -1.1 124,015 - B158DRAFT_1988 0.19 +0.8 124,015 - B158DRAFT_1988 0.19 +1.1 124,015 - B158DRAFT_1988 0.19 +1.1 124,015 - B158DRAFT_1988 0.19 -0.0 124,015 - B158DRAFT_1988 0.19 -0.2 124,061 + B158DRAFT_1988 0.35 -0.2 124,069 - B158DRAFT_1988 0.38 -1.1 124,074 + B158DRAFT_1988 0.40 -0.6 124,082 - B158DRAFT_1988 0.42 -0.2 124,089 + B158DRAFT_1988 0.45 -0.8 124,092 - B158DRAFT_1988 0.46 +0.1 124,119 + B158DRAFT_1988 0.55 -0.5 124,128 + B158DRAFT_1988 0.58 -0.0 124,132 - B158DRAFT_1988 0.59 -1.7 124,137 - B158DRAFT_1988 0.61 -0.2 124,173 + B158DRAFT_1988 0.74 -0.2 124,173 + B158DRAFT_1988 0.74 -0.4 124,173 + B158DRAFT_1988 0.74 -1.2 124,173 + B158DRAFT_1988 0.74 -1.2 124,173 + B158DRAFT_1988 0.74 -0.4 124,181 - B158DRAFT_1988 0.76 +0.7 124,181 - B158DRAFT_1988 0.76 -0.0 124,181 - B158DRAFT_1988 0.76 -0.5 124,181 - B158DRAFT_1988 0.76 -1.2 124,181 - B158DRAFT_1988 0.76 +0.2 124,219 + B158DRAFT_1988 0.89 -0.3 124,251 - -0.5 124,297 + -0.2 124,349 - -0.0 124,359 + -1.2 124,418 + -0.1 124,426 - -1.1 124,426 - -0.9 124,454 + -0.5 124,494 - +2.6 124,494 - -0.4 124,513 + -0.9 124,521 - +0.6 124,521 - +1.4 124,542 - -1.4 124,549 + +0.2 124,549 + +1.2 124,549 + +0.3 124,549 + -0.4 124,549 + +0.4 124,554 + +0.5 124,557 - -1.5 124,557 - +0.7 124,559 + +0.3 124,559 + -1.2 124,559 + +0.2 124,562 - +1.4 124,567 - +0.5 124,586 - -0.1 124,626 + -0.5 124,636 - +2.3 124,768 + B158DRAFT_1989 0.15 +1.8 124,860 + B158DRAFT_1989 0.19 +0.4 125,097 + B158DRAFT_1989 0.29 -0.0 125,213 - B158DRAFT_1989 0.34 -0.3 125,213 - B158DRAFT_1989 0.34 +1.4 125,239 + B158DRAFT_1989 0.35 -1.9 125,247 - B158DRAFT_1989 0.35 +1.1
Or see this region's nucleotide sequence