Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1921 and B158DRAFT_1922 are separated by 300 nucleotides B158DRAFT_1922 and B158DRAFT_1923 are separated by 117 nucleotides B158DRAFT_1923 and B158DRAFT_1924 are separated by 93 nucleotides
B158DRAFT_1921: B158DRAFT_1921 - glutaminyl-tRNA synthetase (EC 6.1.1.18), at 55,714 to 57,426
_1921
B158DRAFT_1922: B158DRAFT_1922 - Uncharacterized protein involved in outer membrane biogenesis, at 57,727 to 59,574
_1922
B158DRAFT_1923: B158DRAFT_1923 - hypothetical protein, at 59,692 to 60,450
_1923
B158DRAFT_1924: B158DRAFT_1924 - Methyltransferase domain., at 60,544 to 61,176
_1924
Position (kb) 57
58
59
60 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 57.396 kb on + strand at 57.396 kb on + strand at 57.396 kb on + strand at 57.444 kb on - strand at 57.457 kb on + strand at 57.505 kb on - strand at 57.505 kb on - strand at 57.506 kb on - strand at 57.506 kb on - strand at 57.507 kb on + strand at 57.515 kb on - strand at 57.515 kb on - strand at 57.515 kb on - strand at 57.515 kb on - strand at 57.515 kb on - strand at 57.517 kb on + strand at 57.517 kb on + strand at 57.521 kb on + strand at 57.525 kb on - strand at 57.525 kb on - strand at 57.525 kb on - strand at 57.530 kb on - strand at 57.531 kb on + strand at 57.539 kb on - strand at 57.539 kb on - strand at 57.553 kb on - strand at 57.608 kb on - strand at 57.646 kb on - strand at 57.683 kb on + strand at 57.757 kb on - strand at 57.757 kb on - strand at 57.757 kb on - strand at 57.828 kb on + strand at 57.828 kb on + strand at 57.836 kb on - strand at 57.841 kb on - strand at 57.892 kb on + strand at 57.893 kb on + strand at 57.900 kb on - strand at 57.900 kb on - strand at 57.955 kb on + strand, within B158DRAFT_1922 at 57.970 kb on - strand, within B158DRAFT_1922 at 57.972 kb on + strand, within B158DRAFT_1922 at 57.972 kb on + strand, within B158DRAFT_1922 at 57.972 kb on + strand, within B158DRAFT_1922 at 57.972 kb on + strand, within B158DRAFT_1922 at 57.972 kb on + strand, within B158DRAFT_1922 at 57.972 kb on + strand, within B158DRAFT_1922 at 57.972 kb on + strand, within B158DRAFT_1922 at 57.972 kb on + strand, within B158DRAFT_1922 at 57.972 kb on + strand, within B158DRAFT_1922 at 57.972 kb on + strand, within B158DRAFT_1922 at 57.972 kb on + strand, within B158DRAFT_1922 at 57.980 kb on - strand, within B158DRAFT_1922 at 57.980 kb on - strand, within B158DRAFT_1922 at 57.980 kb on - strand, within B158DRAFT_1922 at 57.980 kb on - strand, within B158DRAFT_1922 at 57.980 kb on - strand, within B158DRAFT_1922 at 57.980 kb on - strand, within B158DRAFT_1922 at 57.980 kb on - strand, within B158DRAFT_1922 at 57.980 kb on - strand, within B158DRAFT_1922 at 57.980 kb on - strand, within B158DRAFT_1922 at 58.018 kb on - strand, within B158DRAFT_1922 at 58.084 kb on - strand, within B158DRAFT_1922 at 58.162 kb on + strand, within B158DRAFT_1922 at 58.162 kb on + strand, within B158DRAFT_1922 at 58.162 kb on + strand, within B158DRAFT_1922 at 58.162 kb on + strand, within B158DRAFT_1922 at 58.162 kb on + strand, within B158DRAFT_1922 at 58.162 kb on + strand, within B158DRAFT_1922 at 58.167 kb on + strand, within B158DRAFT_1922 at 58.167 kb on + strand, within B158DRAFT_1922 at 58.170 kb on - strand, within B158DRAFT_1922 at 58.170 kb on - strand, within B158DRAFT_1922 at 58.170 kb on - strand, within B158DRAFT_1922 at 58.170 kb on - strand, within B158DRAFT_1922 at 58.170 kb on - strand, within B158DRAFT_1922 at 58.170 kb on - strand, within B158DRAFT_1922 at 58.175 kb on - strand, within B158DRAFT_1922 at 58.227 kb on + strand, within B158DRAFT_1922 at 58.235 kb on - strand, within B158DRAFT_1922 at 58.289 kb on - strand, within B158DRAFT_1922 at 58.317 kb on + strand, within B158DRAFT_1922 at 58.320 kb on - strand, within B158DRAFT_1922 at 58.335 kb on - strand, within B158DRAFT_1922 at 58.335 kb on - strand, within B158DRAFT_1922 at 58.354 kb on - strand, within B158DRAFT_1922 at 58.359 kb on - strand, within B158DRAFT_1922 at 58.486 kb on - strand, within B158DRAFT_1922 at 58.515 kb on - strand, within B158DRAFT_1922 at 58.542 kb on - strand, within B158DRAFT_1922 at 58.549 kb on + strand, within B158DRAFT_1922 at 58.550 kb on - strand, within B158DRAFT_1922 at 58.557 kb on - strand, within B158DRAFT_1922 at 58.607 kb on - strand, within B158DRAFT_1922 at 58.634 kb on + strand, within B158DRAFT_1922 at 58.650 kb on - strand, within B158DRAFT_1922 at 58.658 kb on - strand, within B158DRAFT_1922 at 58.667 kb on + strand, within B158DRAFT_1922 at 58.677 kb on + strand, within B158DRAFT_1922 at 58.682 kb on + strand, within B158DRAFT_1922 at 58.683 kb on + strand, within B158DRAFT_1922 at 58.691 kb on - strand, within B158DRAFT_1922 at 58.737 kb on + strand, within B158DRAFT_1922 at 58.807 kb on - strand, within B158DRAFT_1922 at 58.809 kb on + strand, within B158DRAFT_1922 at 58.817 kb on - strand, within B158DRAFT_1922 at 58.834 kb on - strand, within B158DRAFT_1922 at 58.850 kb on - strand, within B158DRAFT_1922 at 58.914 kb on - strand, within B158DRAFT_1922 at 58.914 kb on - strand, within B158DRAFT_1922 at 58.919 kb on - strand, within B158DRAFT_1922 at 58.929 kb on - strand, within B158DRAFT_1922 at 59.066 kb on + strand, within B158DRAFT_1922 at 59.066 kb on + strand, within B158DRAFT_1922 at 59.089 kb on + strand, within B158DRAFT_1922 at 59.134 kb on + strand, within B158DRAFT_1922 at 59.134 kb on + strand, within B158DRAFT_1922 at 59.134 kb on + strand, within B158DRAFT_1922 at 59.142 kb on - strand, within B158DRAFT_1922 at 59.142 kb on - strand, within B158DRAFT_1922 at 59.148 kb on - strand, within B158DRAFT_1922 at 59.150 kb on + strand, within B158DRAFT_1922 at 59.158 kb on - strand, within B158DRAFT_1922 at 59.158 kb on - strand, within B158DRAFT_1922 at 59.172 kb on - strand, within B158DRAFT_1922 at 59.193 kb on + strand, within B158DRAFT_1922 at 59.212 kb on + strand, within B158DRAFT_1922 at 59.224 kb on + strand, within B158DRAFT_1922 at 59.260 kb on + strand, within B158DRAFT_1922 at 59.280 kb on + strand, within B158DRAFT_1922 at 59.326 kb on - strand, within B158DRAFT_1922 at 59.331 kb on + strand, within B158DRAFT_1922 at 59.331 kb on + strand, within B158DRAFT_1922 at 59.396 kb on + strand at 59.404 kb on - strand at 59.417 kb on + strand at 59.425 kb on - strand at 59.480 kb on - strand at 59.511 kb on + strand at 59.511 kb on + strand at 59.519 kb on - strand at 59.573 kb on - strand at 59.630 kb on + strand at 59.638 kb on - strand at 59.638 kb on - strand at 59.783 kb on + strand, within B158DRAFT_1923 at 59.783 kb on + strand, within B158DRAFT_1923 at 59.783 kb on + strand, within B158DRAFT_1923 at 59.804 kb on + strand, within B158DRAFT_1923 at 60.002 kb on - strand, within B158DRAFT_1923 at 60.049 kb on - strand, within B158DRAFT_1923 at 60.149 kb on + strand, within B158DRAFT_1923 at 60.215 kb on - strand, within B158DRAFT_1923 at 60.224 kb on + strand, within B158DRAFT_1923 at 60.377 kb on + strand at 60.381 kb on + strand at 60.466 kb on + strand at 60.466 kb on + strand at 60.466 kb on + strand at 60.474 kb on - strand at 60.474 kb on - strand at 60.474 kb on - strand at 60.474 kb on - strand at 60.542 kb on + strand at 60.542 kb on + strand at 60.550 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 57,396 + +1.5 57,396 + -0.2 57,396 + -1.2 57,444 - -1.2 57,457 + -0.9 57,505 - -0.0 57,505 - -1.1 57,506 - -0.2 57,506 - -1.4 57,507 + -2.3 57,515 - +0.4 57,515 - -0.9 57,515 - -1.2 57,515 - -2.0 57,515 - -1.1 57,517 + -0.6 57,517 + -1.3 57,521 + -1.4 57,525 - -0.4 57,525 - -0.7 57,525 - -2.2 57,530 - +0.3 57,531 + -2.5 57,539 - +0.4 57,539 - -0.1 57,553 - +2.1 57,608 - -2.4 57,646 - -0.2 57,683 + -0.6 57,757 - +0.6 57,757 - -0.9 57,757 - -2.1 57,828 + -1.4 57,828 + +1.2 57,836 - +3.3 57,841 - +0.1 57,892 + +0.4 57,893 + +1.3 57,900 - +4.1 57,900 - -1.1 57,955 + B158DRAFT_1922 0.12 +1.3 57,970 - B158DRAFT_1922 0.13 -0.2 57,972 + B158DRAFT_1922 0.13 -0.5 57,972 + B158DRAFT_1922 0.13 +1.2 57,972 + B158DRAFT_1922 0.13 -1.3 57,972 + B158DRAFT_1922 0.13 -1.6 57,972 + B158DRAFT_1922 0.13 -2.7 57,972 + B158DRAFT_1922 0.13 +0.2 57,972 + B158DRAFT_1922 0.13 -1.2 57,972 + B158DRAFT_1922 0.13 -0.1 57,972 + B158DRAFT_1922 0.13 -1.0 57,972 + B158DRAFT_1922 0.13 +0.8 57,972 + B158DRAFT_1922 0.13 -2.5 57,980 - B158DRAFT_1922 0.14 -0.7 57,980 - B158DRAFT_1922 0.14 +0.9 57,980 - B158DRAFT_1922 0.14 -0.1 57,980 - B158DRAFT_1922 0.14 -0.7 57,980 - B158DRAFT_1922 0.14 +1.9 57,980 - B158DRAFT_1922 0.14 -1.0 57,980 - B158DRAFT_1922 0.14 -0.4 57,980 - B158DRAFT_1922 0.14 -1.4 57,980 - B158DRAFT_1922 0.14 +0.3 58,018 - B158DRAFT_1922 0.16 +0.1 58,084 - B158DRAFT_1922 0.19 -0.7 58,162 + B158DRAFT_1922 0.24 -1.4 58,162 + B158DRAFT_1922 0.24 -1.8 58,162 + B158DRAFT_1922 0.24 -0.9 58,162 + B158DRAFT_1922 0.24 -1.0 58,162 + B158DRAFT_1922 0.24 +2.4 58,162 + B158DRAFT_1922 0.24 -1.7 58,167 + B158DRAFT_1922 0.24 -1.1 58,167 + B158DRAFT_1922 0.24 +0.6 58,170 - B158DRAFT_1922 0.24 -1.3 58,170 - B158DRAFT_1922 0.24 -0.2 58,170 - B158DRAFT_1922 0.24 -0.5 58,170 - B158DRAFT_1922 0.24 +0.0 58,170 - B158DRAFT_1922 0.24 -1.2 58,170 - B158DRAFT_1922 0.24 -1.5 58,175 - B158DRAFT_1922 0.24 -0.8 58,227 + B158DRAFT_1922 0.27 -1.4 58,235 - B158DRAFT_1922 0.27 -2.0 58,289 - B158DRAFT_1922 0.30 -1.2 58,317 + B158DRAFT_1922 0.32 -1.1 58,320 - B158DRAFT_1922 0.32 +1.7 58,335 - B158DRAFT_1922 0.33 +0.5 58,335 - B158DRAFT_1922 0.33 -1.1 58,354 - B158DRAFT_1922 0.34 +0.2 58,359 - B158DRAFT_1922 0.34 +1.1 58,486 - B158DRAFT_1922 0.41 -0.4 58,515 - B158DRAFT_1922 0.43 +1.9 58,542 - B158DRAFT_1922 0.44 +2.0 58,549 + B158DRAFT_1922 0.44 +0.8 58,550 - B158DRAFT_1922 0.45 -0.8 58,557 - B158DRAFT_1922 0.45 -1.3 58,607 - B158DRAFT_1922 0.48 +1.8 58,634 + B158DRAFT_1922 0.49 -0.2 58,650 - B158DRAFT_1922 0.50 -2.2 58,658 - B158DRAFT_1922 0.50 -1.8 58,667 + B158DRAFT_1922 0.51 +0.7 58,677 + B158DRAFT_1922 0.51 -2.1 58,682 + B158DRAFT_1922 0.52 +0.2 58,683 + B158DRAFT_1922 0.52 +2.1 58,691 - B158DRAFT_1922 0.52 -2.1 58,737 + B158DRAFT_1922 0.55 -0.9 58,807 - B158DRAFT_1922 0.58 -0.7 58,809 + B158DRAFT_1922 0.59 -2.1 58,817 - B158DRAFT_1922 0.59 +0.9 58,834 - B158DRAFT_1922 0.60 -1.5 58,850 - B158DRAFT_1922 0.61 -0.7 58,914 - B158DRAFT_1922 0.64 -2.0 58,914 - B158DRAFT_1922 0.64 -0.3 58,919 - B158DRAFT_1922 0.65 +0.5 58,929 - B158DRAFT_1922 0.65 +0.5 59,066 + B158DRAFT_1922 0.72 -0.7 59,066 + B158DRAFT_1922 0.72 -2.1 59,089 + B158DRAFT_1922 0.74 -0.0 59,134 + B158DRAFT_1922 0.76 -2.9 59,134 + B158DRAFT_1922 0.76 +0.5 59,134 + B158DRAFT_1922 0.76 -1.1 59,142 - B158DRAFT_1922 0.77 +0.9 59,142 - B158DRAFT_1922 0.77 -1.3 59,148 - B158DRAFT_1922 0.77 -0.0 59,150 + B158DRAFT_1922 0.77 -3.1 59,158 - B158DRAFT_1922 0.77 -0.5 59,158 - B158DRAFT_1922 0.77 -1.4 59,172 - B158DRAFT_1922 0.78 -0.3 59,193 + B158DRAFT_1922 0.79 -1.2 59,212 + B158DRAFT_1922 0.80 -2.4 59,224 + B158DRAFT_1922 0.81 -1.0 59,260 + B158DRAFT_1922 0.83 +0.6 59,280 + B158DRAFT_1922 0.84 -1.3 59,326 - B158DRAFT_1922 0.87 -1.5 59,331 + B158DRAFT_1922 0.87 -0.2 59,331 + B158DRAFT_1922 0.87 +1.2 59,396 + -1.2 59,404 - +0.2 59,417 + +0.5 59,425 - -2.1 59,480 - -2.1 59,511 + -1.5 59,511 + -1.6 59,519 - -0.7 59,573 - -0.0 59,630 + -1.3 59,638 - -1.2 59,638 - -1.2 59,783 + B158DRAFT_1923 0.12 +0.6 59,783 + B158DRAFT_1923 0.12 -0.2 59,783 + B158DRAFT_1923 0.12 +0.1 59,804 + B158DRAFT_1923 0.15 -1.7 60,002 - B158DRAFT_1923 0.41 +1.3 60,049 - B158DRAFT_1923 0.47 +4.5 60,149 + B158DRAFT_1923 0.60 +3.5 60,215 - B158DRAFT_1923 0.69 +3.5 60,224 + B158DRAFT_1923 0.70 +0.9 60,377 + -1.0 60,381 + -0.4 60,466 + -1.1 60,466 + +0.4 60,466 + +3.1 60,474 - -2.4 60,474 - -3.6 60,474 - +0.4 60,474 - +2.5 60,542 + -0.5 60,542 + -1.4 60,550 - -1.2
Or see this region's nucleotide sequence