Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1853

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1850 and B158DRAFT_1851 are separated by 200 nucleotidesB158DRAFT_1851 and B158DRAFT_1852 overlap by 62 nucleotidesB158DRAFT_1852 and B158DRAFT_1853 are separated by 60 nucleotidesB158DRAFT_1853 and B158DRAFT_1854 are separated by 188 nucleotides B158DRAFT_1850: B158DRAFT_1850 - ATP-dependent RNA helicase CsdA (EC 5.99.1.-), at 963 to 2,756 _1850 B158DRAFT_1851: B158DRAFT_1851 - hypothetical protein, at 2,957 to 3,082 _1851 B158DRAFT_1852: B158DRAFT_1852 - hypothetical protein, at 3,021 to 3,512 _1852 B158DRAFT_1853: B158DRAFT_1853 - Imidazolonepropionase and related amidohydrolases, at 3,573 to 4,871 _1853 B158DRAFT_1854: B158DRAFT_1854 - UDP-N-acetylmuramate dehydrogenase (EC 1.1.1.158), at 5,060 to 6,091 _1854 Position (kb) 3 4 5Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 2.598 kb on - strandat 2.722 kb on - strandat 2.723 kb on - strandat 2.767 kb on - strandat 2.868 kb on + strandat 2.868 kb on + strandat 2.868 kb on + strandat 2.873 kb on + strandat 2.876 kb on - strandat 2.923 kb on + strandat 2.929 kb on - strandat 2.980 kb on + strand, within B158DRAFT_1851at 3.006 kb on + strand, within B158DRAFT_1851at 3.014 kb on - strand, within B158DRAFT_1851at 3.014 kb on - strand, within B158DRAFT_1851at 3.039 kb on + strandat 3.187 kb on + strand, within B158DRAFT_1852at 3.297 kb on + strand, within B158DRAFT_1852at 3.398 kb on + strand, within B158DRAFT_1852at 3.633 kb on - strandat 3.667 kb on - strandat 3.681 kb on - strandat 3.716 kb on + strand, within B158DRAFT_1853at 3.716 kb on + strand, within B158DRAFT_1853at 3.716 kb on + strand, within B158DRAFT_1853at 3.716 kb on + strand, within B158DRAFT_1853at 3.724 kb on - strand, within B158DRAFT_1853at 3.724 kb on - strand, within B158DRAFT_1853at 3.726 kb on + strand, within B158DRAFT_1853at 3.726 kb on + strand, within B158DRAFT_1853at 3.726 kb on + strand, within B158DRAFT_1853at 3.734 kb on - strand, within B158DRAFT_1853at 3.734 kb on - strand, within B158DRAFT_1853at 3.734 kb on - strand, within B158DRAFT_1853at 3.734 kb on - strand, within B158DRAFT_1853at 3.734 kb on - strand, within B158DRAFT_1853at 3.898 kb on - strand, within B158DRAFT_1853at 3.898 kb on - strand, within B158DRAFT_1853at 3.912 kb on - strand, within B158DRAFT_1853at 3.983 kb on + strand, within B158DRAFT_1853at 4.046 kb on + strand, within B158DRAFT_1853at 4.046 kb on + strand, within B158DRAFT_1853at 4.046 kb on + strand, within B158DRAFT_1853at 4.054 kb on - strand, within B158DRAFT_1853at 4.054 kb on - strand, within B158DRAFT_1853at 4.054 kb on - strand, within B158DRAFT_1853at 4.054 kb on - strand, within B158DRAFT_1853at 4.059 kb on - strand, within B158DRAFT_1853at 4.123 kb on + strand, within B158DRAFT_1853at 4.124 kb on - strand, within B158DRAFT_1853at 4.131 kb on - strand, within B158DRAFT_1853at 4.150 kb on + strand, within B158DRAFT_1853at 4.158 kb on - strand, within B158DRAFT_1853at 4.167 kb on + strand, within B158DRAFT_1853at 4.197 kb on - strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.267 kb on + strand, within B158DRAFT_1853at 4.280 kb on + strand, within B158DRAFT_1853at 4.280 kb on + strand, within B158DRAFT_1853at 4.280 kb on + strand, within B158DRAFT_1853at 4.280 kb on + strand, within B158DRAFT_1853at 4.280 kb on + strand, within B158DRAFT_1853at 4.280 kb on + strand, within B158DRAFT_1853at 4.280 kb on + strand, within B158DRAFT_1853at 4.280 kb on + strand, within B158DRAFT_1853at 4.288 kb on + strand, within B158DRAFT_1853at 4.288 kb on - strand, within B158DRAFT_1853at 4.288 kb on - strand, within B158DRAFT_1853at 4.288 kb on - strand, within B158DRAFT_1853at 4.288 kb on - strand, within B158DRAFT_1853at 4.288 kb on - strand, within B158DRAFT_1853at 4.288 kb on - strand, within B158DRAFT_1853at 4.290 kb on + strand, within B158DRAFT_1853at 4.290 kb on + strand, within B158DRAFT_1853at 4.298 kb on - strand, within B158DRAFT_1853at 4.298 kb on - strand, within B158DRAFT_1853at 4.298 kb on - strand, within B158DRAFT_1853at 4.298 kb on - strand, within B158DRAFT_1853at 4.298 kb on - strand, within B158DRAFT_1853at 4.298 kb on - strand, within B158DRAFT_1853at 4.298 kb on - strand, within B158DRAFT_1853at 4.321 kb on + strand, within B158DRAFT_1853at 4.323 kb on - strand, within B158DRAFT_1853at 4.323 kb on - strand, within B158DRAFT_1853at 4.342 kb on - strand, within B158DRAFT_1853at 4.355 kb on - strand, within B158DRAFT_1853at 4.363 kb on - strand, within B158DRAFT_1853at 4.409 kb on + strand, within B158DRAFT_1853at 4.409 kb on + strand, within B158DRAFT_1853at 4.414 kb on + strand, within B158DRAFT_1853at 4.414 kb on + strand, within B158DRAFT_1853at 4.414 kb on + strand, within B158DRAFT_1853at 4.417 kb on - strand, within B158DRAFT_1853at 4.417 kb on - strand, within B158DRAFT_1853at 4.422 kb on - strand, within B158DRAFT_1853at 4.422 kb on - strand, within B158DRAFT_1853at 4.422 kb on - strand, within B158DRAFT_1853at 4.422 kb on - strand, within B158DRAFT_1853at 4.424 kb on + strand, within B158DRAFT_1853at 4.427 kb on - strand, within B158DRAFT_1853at 4.485 kb on + strand, within B158DRAFT_1853at 4.548 kb on + strand, within B158DRAFT_1853at 4.548 kb on + strand, within B158DRAFT_1853at 4.556 kb on - strand, within B158DRAFT_1853at 4.584 kb on + strand, within B158DRAFT_1853at 4.593 kb on + strand, within B158DRAFT_1853at 4.641 kb on + strand, within B158DRAFT_1853at 4.670 kb on - strand, within B158DRAFT_1853at 4.709 kb on + strand, within B158DRAFT_1853at 4.709 kb on + strand, within B158DRAFT_1853at 4.709 kb on + strand, within B158DRAFT_1853at 4.709 kb on + strand, within B158DRAFT_1853at 4.717 kb on - strand, within B158DRAFT_1853at 4.717 kb on - strand, within B158DRAFT_1853at 4.719 kb on + strand, within B158DRAFT_1853at 4.730 kb on + strand, within B158DRAFT_1853at 4.731 kb on + strand, within B158DRAFT_1853at 4.731 kb on + strand, within B158DRAFT_1853at 4.739 kb on - strand, within B158DRAFT_1853at 4.774 kb on + strandat 4.782 kb on - strandat 4.806 kb on + strandat 4.813 kb on - strandat 4.814 kb on - strandat 4.825 kb on + strandat 4.825 kb on + strandat 4.845 kb on + strandat 4.853 kb on - strandat 4.853 kb on - strandat 4.853 kb on - strandat 4.853 kb on - strandat 4.853 kb on - strandat 4.853 kb on - strandat 4.863 kb on - strandat 4.873 kb on + strandat 4.881 kb on - strandat 4.932 kb on - strandat 4.937 kb on + strandat 4.937 kb on + strandat 4.937 kb on + strandat 4.945 kb on - strandat 4.945 kb on - strandat 5.015 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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2,598 - -1.3
2,722 - -0.2
2,723 - -1.9
2,767 - -0.7
2,868 + -0.4
2,868 + -0.9
2,868 + -0.1
2,873 + -0.0
2,876 - -2.0
2,923 + +0.5
2,929 - -0.4
2,980 + B158DRAFT_1851 0.18 -2.1
3,006 + B158DRAFT_1851 0.39 +0.1
3,014 - B158DRAFT_1851 0.45 -1.1
3,014 - B158DRAFT_1851 0.45 -1.5
3,039 + -1.5
3,187 + B158DRAFT_1852 0.34 +1.5
3,297 + B158DRAFT_1852 0.56 -0.0
3,398 + B158DRAFT_1852 0.77 +0.0
3,633 - -0.1
3,667 - -0.3
3,681 - -1.1
3,716 + B158DRAFT_1853 0.11 -0.7
3,716 + B158DRAFT_1853 0.11 -0.1
3,716 + B158DRAFT_1853 0.11 -1.4
3,716 + B158DRAFT_1853 0.11 +0.6
3,724 - B158DRAFT_1853 0.12 -1.3
3,724 - B158DRAFT_1853 0.12 -0.5
3,726 + B158DRAFT_1853 0.12 -0.9
3,726 + B158DRAFT_1853 0.12 -0.1
3,726 + B158DRAFT_1853 0.12 -0.5
3,734 - B158DRAFT_1853 0.12 -3.1
3,734 - B158DRAFT_1853 0.12 +1.0
3,734 - B158DRAFT_1853 0.12 -0.6
3,734 - B158DRAFT_1853 0.12 -0.2
3,734 - B158DRAFT_1853 0.12 -1.0
3,898 - B158DRAFT_1853 0.25 -1.0
3,898 - B158DRAFT_1853 0.25 -1.7
3,912 - B158DRAFT_1853 0.26 -0.7
3,983 + B158DRAFT_1853 0.32 -1.2
4,046 + B158DRAFT_1853 0.36 +1.7
4,046 + B158DRAFT_1853 0.36 -3.1
4,046 + B158DRAFT_1853 0.36 +0.3
4,054 - B158DRAFT_1853 0.37 -0.4
4,054 - B158DRAFT_1853 0.37 +0.2
4,054 - B158DRAFT_1853 0.37 -1.9
4,054 - B158DRAFT_1853 0.37 -0.4
4,059 - B158DRAFT_1853 0.37 +1.0
4,123 + B158DRAFT_1853 0.42 +0.4
4,124 - B158DRAFT_1853 0.42 -0.0
4,131 - B158DRAFT_1853 0.43 -1.0
4,150 + B158DRAFT_1853 0.44 -0.9
4,158 - B158DRAFT_1853 0.45 +0.2
4,167 + B158DRAFT_1853 0.46 -0.7
4,197 - B158DRAFT_1853 0.48 -2.0
4,200 + B158DRAFT_1853 0.48 -0.7
4,200 + B158DRAFT_1853 0.48 -1.2
4,200 + B158DRAFT_1853 0.48 -0.4
4,200 + B158DRAFT_1853 0.48 -0.1
4,200 + B158DRAFT_1853 0.48 +0.7
4,200 + B158DRAFT_1853 0.48 -1.7
4,200 + B158DRAFT_1853 0.48 +1.1
4,200 + B158DRAFT_1853 0.48 -1.0
4,200 + B158DRAFT_1853 0.48 -1.1
4,200 + B158DRAFT_1853 0.48 -1.7
4,200 + B158DRAFT_1853 0.48 -0.9
4,200 + B158DRAFT_1853 0.48 -0.4
4,200 + B158DRAFT_1853 0.48 +0.4
4,200 + B158DRAFT_1853 0.48 -0.3
4,200 + B158DRAFT_1853 0.48 -0.1
4,200 + B158DRAFT_1853 0.48 +0.3
4,200 + B158DRAFT_1853 0.48 -2.1
4,200 + B158DRAFT_1853 0.48 -0.6
4,200 + B158DRAFT_1853 0.48 -0.8
4,200 + B158DRAFT_1853 0.48 -0.5
4,200 + B158DRAFT_1853 0.48 +0.7
4,200 + B158DRAFT_1853 0.48 +0.8
4,200 + B158DRAFT_1853 0.48 -1.2
4,200 + B158DRAFT_1853 0.48 +0.2
4,200 + B158DRAFT_1853 0.48 -1.7
4,200 + B158DRAFT_1853 0.48 +0.1
4,200 + B158DRAFT_1853 0.48 -2.7
4,200 + B158DRAFT_1853 0.48 -1.5
4,200 + B158DRAFT_1853 0.48 -0.7
4,200 + B158DRAFT_1853 0.48 -1.1
4,200 + B158DRAFT_1853 0.48 -0.8
4,200 + B158DRAFT_1853 0.48 -0.4
4,200 + B158DRAFT_1853 0.48 -0.8
4,200 + B158DRAFT_1853 0.48 -2.1
4,200 + B158DRAFT_1853 0.48 -1.4
4,200 + B158DRAFT_1853 0.48 -2.2
4,200 + B158DRAFT_1853 0.48 -1.0
4,200 + B158DRAFT_1853 0.48 -2.3
4,200 + B158DRAFT_1853 0.48 -2.1
4,208 - B158DRAFT_1853 0.49 -1.4
4,208 - B158DRAFT_1853 0.49 -2.9
4,208 - B158DRAFT_1853 0.49 -1.1
4,208 - B158DRAFT_1853 0.49 -0.6
4,208 - B158DRAFT_1853 0.49 -0.3
4,208 - B158DRAFT_1853 0.49 -0.2
4,208 - B158DRAFT_1853 0.49 -1.0
4,208 - B158DRAFT_1853 0.49 +0.1
4,208 - B158DRAFT_1853 0.49 -0.9
4,208 - B158DRAFT_1853 0.49 -1.4
4,208 - B158DRAFT_1853 0.49 +0.6
4,208 - B158DRAFT_1853 0.49 -1.3
4,208 - B158DRAFT_1853 0.49 -0.2
4,208 - B158DRAFT_1853 0.49 -1.1
4,208 - B158DRAFT_1853 0.49 +4.5
4,208 - B158DRAFT_1853 0.49 +0.7
4,208 - B158DRAFT_1853 0.49 -0.3
4,208 - B158DRAFT_1853 0.49 -2.2
4,208 - B158DRAFT_1853 0.49 +1.5
4,208 - B158DRAFT_1853 0.49 +0.1
4,208 - B158DRAFT_1853 0.49 +0.9
4,208 - B158DRAFT_1853 0.49 +0.8
4,208 - B158DRAFT_1853 0.49 +1.0
4,208 - B158DRAFT_1853 0.49 -0.5
4,208 - B158DRAFT_1853 0.49 -0.4
4,208 - B158DRAFT_1853 0.49 -1.2
4,208 - B158DRAFT_1853 0.49 +0.2
4,208 - B158DRAFT_1853 0.49 -1.2
4,208 - B158DRAFT_1853 0.49 -1.2
4,208 - B158DRAFT_1853 0.49 -0.7
4,208 - B158DRAFT_1853 0.49 +0.2
4,267 + B158DRAFT_1853 0.53 -1.3
4,280 + B158DRAFT_1853 0.54 +0.7
4,280 + B158DRAFT_1853 0.54 -2.4
4,280 + B158DRAFT_1853 0.54 +1.6
4,280 + B158DRAFT_1853 0.54 -1.1
4,280 + B158DRAFT_1853 0.54 -0.4
4,280 + B158DRAFT_1853 0.54 +1.5
4,280 + B158DRAFT_1853 0.54 -1.1
4,280 + B158DRAFT_1853 0.54 -1.4
4,288 + B158DRAFT_1853 0.55 -0.5
4,288 - B158DRAFT_1853 0.55 +1.0
4,288 - B158DRAFT_1853 0.55 -1.7
4,288 - B158DRAFT_1853 0.55 -1.4
4,288 - B158DRAFT_1853 0.55 -0.4
4,288 - B158DRAFT_1853 0.55 -0.2
4,288 - B158DRAFT_1853 0.55 -0.1
4,290 + B158DRAFT_1853 0.55 -2.5
4,290 + B158DRAFT_1853 0.55 +0.0
4,298 - B158DRAFT_1853 0.56 +1.5
4,298 - B158DRAFT_1853 0.56 -0.4
4,298 - B158DRAFT_1853 0.56 -0.3
4,298 - B158DRAFT_1853 0.56 +0.0
4,298 - B158DRAFT_1853 0.56 -1.1
4,298 - B158DRAFT_1853 0.56 +0.3
4,298 - B158DRAFT_1853 0.56 +1.4
4,321 + B158DRAFT_1853 0.58 -1.4
4,323 - B158DRAFT_1853 0.58 +0.4
4,323 - B158DRAFT_1853 0.58 -0.8
4,342 - B158DRAFT_1853 0.59 +0.1
4,355 - B158DRAFT_1853 0.60 +0.1
4,363 - B158DRAFT_1853 0.61 -1.6
4,409 + B158DRAFT_1853 0.64 +3.9
4,409 + B158DRAFT_1853 0.64 -1.0
4,414 + B158DRAFT_1853 0.65 +0.2
4,414 + B158DRAFT_1853 0.65 +3.9
4,414 + B158DRAFT_1853 0.65 -1.1
4,417 - B158DRAFT_1853 0.65 -0.7
4,417 - B158DRAFT_1853 0.65 +0.9
4,422 - B158DRAFT_1853 0.65 -0.3
4,422 - B158DRAFT_1853 0.65 -2.5
4,422 - B158DRAFT_1853 0.65 -1.3
4,422 - B158DRAFT_1853 0.65 -1.3
4,424 + B158DRAFT_1853 0.66 -2.1
4,427 - B158DRAFT_1853 0.66 +0.6
4,485 + B158DRAFT_1853 0.70 -1.1
4,548 + B158DRAFT_1853 0.75 -2.0
4,548 + B158DRAFT_1853 0.75 -1.1
4,556 - B158DRAFT_1853 0.76 -0.2
4,584 + B158DRAFT_1853 0.78 -0.7
4,593 + B158DRAFT_1853 0.79 +2.6
4,641 + B158DRAFT_1853 0.82 -0.6
4,670 - B158DRAFT_1853 0.84 +1.3
4,709 + B158DRAFT_1853 0.87 +1.3
4,709 + B158DRAFT_1853 0.87 -1.3
4,709 + B158DRAFT_1853 0.87 +1.7
4,709 + B158DRAFT_1853 0.87 -0.5
4,717 - B158DRAFT_1853 0.88 -2.6
4,717 - B158DRAFT_1853 0.88 -1.7
4,719 + B158DRAFT_1853 0.88 +0.3
4,730 + B158DRAFT_1853 0.89 -1.2
4,731 + B158DRAFT_1853 0.89 -0.3
4,731 + B158DRAFT_1853 0.89 +0.7
4,739 - B158DRAFT_1853 0.90 -0.6
4,774 + -1.3
4,782 - +0.4
4,806 + -1.8
4,813 - +2.9
4,814 - -2.3
4,825 + -2.5
4,825 + -1.3
4,845 + +0.4
4,853 - -1.5
4,853 - +0.2
4,853 - +0.3
4,853 - +1.0
4,853 - -1.0
4,853 - -0.2
4,863 - +0.1
4,873 + -1.4
4,881 - -0.1
4,932 - -0.7
4,937 + -0.5
4,937 + -0.1
4,937 + +0.1
4,945 - -1.4
4,945 - +2.1
5,015 + -0.9

Or see this region's nucleotide sequence