Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1624 and B158DRAFT_1625 are separated by 84 nucleotides B158DRAFT_1625 and B158DRAFT_1626 are separated by 34 nucleotides B158DRAFT_1626 and B158DRAFT_1628 are separated by 469 nucleotides
B158DRAFT_1624: B158DRAFT_1624 - Hg(II)-responsive transcriptional regulator, at 1,684,614 to 1,685,006
_1624
B158DRAFT_1625: B158DRAFT_1625 - MerT mercuric transport protein., at 1,685,091 to 1,685,438
_1625
B158DRAFT_1626: B158DRAFT_1626 - mercuric transport protein periplasmic component, at 1,685,473 to 1,685,748
_1626
B158DRAFT_1628: B158DRAFT_1628 - mercuric reductase, at 1,686,218 to 1,687,855
_1628
Position (kb)
1685
1686 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5
6 at 1684.534 kb on + strand at 1684.543 kb on - strand at 1684.587 kb on + strand at 1684.587 kb on + strand at 1684.595 kb on - strand at 1684.599 kb on + strand at 1684.655 kb on + strand, within B158DRAFT_1624 at 1684.663 kb on - strand, within B158DRAFT_1624 at 1684.712 kb on + strand, within B158DRAFT_1624 at 1684.773 kb on + strand, within B158DRAFT_1624 at 1684.781 kb on - strand, within B158DRAFT_1624 at 1684.845 kb on + strand, within B158DRAFT_1624 at 1684.845 kb on + strand, within B158DRAFT_1624 at 1684.853 kb on - strand, within B158DRAFT_1624 at 1684.853 kb on - strand, within B158DRAFT_1624 at 1684.904 kb on - strand, within B158DRAFT_1624 at 1684.904 kb on - strand, within B158DRAFT_1624 at 1684.904 kb on - strand, within B158DRAFT_1624 at 1684.904 kb on - strand, within B158DRAFT_1624 at 1684.918 kb on + strand, within B158DRAFT_1624 at 1684.926 kb on - strand, within B158DRAFT_1624 at 1684.951 kb on + strand, within B158DRAFT_1624 at 1684.951 kb on + strand, within B158DRAFT_1624 at 1684.951 kb on + strand, within B158DRAFT_1624 at 1684.951 kb on + strand, within B158DRAFT_1624 at 1684.951 kb on + strand, within B158DRAFT_1624 at 1684.959 kb on - strand, within B158DRAFT_1624 at 1684.959 kb on - strand, within B158DRAFT_1624 at 1685.014 kb on + strand at 1685.071 kb on + strand at 1685.082 kb on + strand at 1685.082 kb on + strand at 1685.082 kb on + strand at 1685.082 kb on + strand at 1685.089 kb on - strand at 1685.090 kb on - strand at 1685.090 kb on - strand at 1685.090 kb on - strand at 1685.153 kb on + strand, within B158DRAFT_1625 at 1685.156 kb on + strand, within B158DRAFT_1625 at 1685.159 kb on - strand, within B158DRAFT_1625 at 1685.161 kb on - strand, within B158DRAFT_1625 at 1685.171 kb on - strand, within B158DRAFT_1625 at 1685.187 kb on - strand, within B158DRAFT_1625 at 1685.192 kb on + strand, within B158DRAFT_1625 at 1685.244 kb on + strand, within B158DRAFT_1625 at 1685.302 kb on + strand, within B158DRAFT_1625 at 1685.302 kb on + strand, within B158DRAFT_1625 at 1685.312 kb on + strand, within B158DRAFT_1625 at 1685.312 kb on + strand, within B158DRAFT_1625 at 1685.312 kb on + strand, within B158DRAFT_1625 at 1685.312 kb on + strand, within B158DRAFT_1625 at 1685.320 kb on - strand, within B158DRAFT_1625 at 1685.320 kb on - strand, within B158DRAFT_1625 at 1685.320 kb on - strand, within B158DRAFT_1625 at 1685.335 kb on - strand, within B158DRAFT_1625 at 1685.451 kb on + strand at 1685.452 kb on + strand at 1685.458 kb on + strand at 1685.488 kb on + strand at 1685.488 kb on + strand at 1685.532 kb on + strand, within B158DRAFT_1626 at 1685.546 kb on + strand, within B158DRAFT_1626 at 1685.546 kb on + strand, within B158DRAFT_1626 at 1685.546 kb on + strand, within B158DRAFT_1626 at 1685.554 kb on - strand, within B158DRAFT_1626 at 1685.554 kb on - strand, within B158DRAFT_1626 at 1685.618 kb on - strand, within B158DRAFT_1626 at 1685.618 kb on - strand, within B158DRAFT_1626 at 1685.618 kb on - strand, within B158DRAFT_1626 at 1685.629 kb on + strand, within B158DRAFT_1626 at 1685.771 kb on + strand at 1685.831 kb on + strand at 1685.836 kb on + strand at 1685.839 kb on - strand at 1685.839 kb on - strand at 1685.839 kb on - strand at 1685.839 kb on - strand at 1685.839 kb on - strand at 1685.844 kb on - strand at 1685.844 kb on - strand at 1685.844 kb on - strand at 1685.844 kb on - strand at 1685.844 kb on - strand at 1685.844 kb on - strand at 1685.851 kb on - strand at 1685.867 kb on + strand at 1685.890 kb on + strand at 1685.898 kb on - strand at 1685.928 kb on + strand at 1685.948 kb on + strand at 1685.954 kb on + strand at 1685.954 kb on + strand at 1685.954 kb on + strand at 1685.962 kb on - strand at 1685.962 kb on - strand at 1685.962 kb on - strand at 1685.962 kb on - strand at 1685.978 kb on + strand at 1685.978 kb on + strand at 1686.031 kb on - strand at 1686.031 kb on - strand at 1686.031 kb on - strand at 1686.031 kb on - strand at 1686.041 kb on - strand at 1686.167 kb on + strand at 1686.266 kb on - strand at 1686.268 kb on + strand at 1686.286 kb on - strand at 1686.384 kb on - strand, within B158DRAFT_1628 at 1686.385 kb on + strand, within B158DRAFT_1628 at 1686.385 kb on + strand, within B158DRAFT_1628 at 1686.385 kb on + strand, within B158DRAFT_1628 at 1686.392 kb on + strand, within B158DRAFT_1628 at 1686.405 kb on + strand, within B158DRAFT_1628 at 1686.407 kb on + strand, within B158DRAFT_1628 at 1686.407 kb on + strand, within B158DRAFT_1628 at 1686.413 kb on - strand, within B158DRAFT_1628 at 1686.415 kb on - strand, within B158DRAFT_1628 at 1686.415 kb on - strand, within B158DRAFT_1628 at 1686.415 kb on - strand, within B158DRAFT_1628 at 1686.438 kb on + strand, within B158DRAFT_1628 at 1686.438 kb on - strand, within B158DRAFT_1628 at 1686.446 kb on - strand, within B158DRAFT_1628 at 1686.486 kb on - strand, within B158DRAFT_1628 at 1686.505 kb on - strand, within B158DRAFT_1628 at 1686.511 kb on + strand, within B158DRAFT_1628 at 1686.521 kb on + strand, within B158DRAFT_1628 at 1686.538 kb on + strand, within B158DRAFT_1628 at 1686.541 kb on - strand, within B158DRAFT_1628 at 1686.546 kb on - strand, within B158DRAFT_1628 at 1686.555 kb on - strand, within B158DRAFT_1628 at 1686.555 kb on - strand, within B158DRAFT_1628 at 1686.565 kb on + strand, within B158DRAFT_1628 at 1686.587 kb on - strand, within B158DRAFT_1628 at 1686.587 kb on - strand, within B158DRAFT_1628 at 1686.591 kb on + strand, within B158DRAFT_1628 at 1686.591 kb on + strand, within B158DRAFT_1628 at 1686.591 kb on + strand, within B158DRAFT_1628 at 1686.592 kb on - strand, within B158DRAFT_1628 at 1686.599 kb on - strand, within B158DRAFT_1628 at 1686.613 kb on + strand, within B158DRAFT_1628 at 1686.621 kb on - strand, within B158DRAFT_1628 at 1686.621 kb on - strand, within B158DRAFT_1628 at 1686.621 kb on - strand, within B158DRAFT_1628 at 1686.623 kb on + strand, within B158DRAFT_1628
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 1,684,534 + +0.4 1,684,543 - +3.2 1,684,587 + -1.0 1,684,587 + -1.1 1,684,595 - +2.3 1,684,599 + -1.0 1,684,655 + B158DRAFT_1624 0.10 -0.8 1,684,663 - B158DRAFT_1624 0.12 +0.2 1,684,712 + B158DRAFT_1624 0.25 -1.5 1,684,773 + B158DRAFT_1624 0.40 +0.8 1,684,781 - B158DRAFT_1624 0.42 -0.2 1,684,845 + B158DRAFT_1624 0.59 +0.4 1,684,845 + B158DRAFT_1624 0.59 -0.8 1,684,853 - B158DRAFT_1624 0.61 +0.2 1,684,853 - B158DRAFT_1624 0.61 +0.7 1,684,904 - B158DRAFT_1624 0.74 -2.3 1,684,904 - B158DRAFT_1624 0.74 +0.3 1,684,904 - B158DRAFT_1624 0.74 -1.1 1,684,904 - B158DRAFT_1624 0.74 -0.4 1,684,918 + B158DRAFT_1624 0.77 +1.0 1,684,926 - B158DRAFT_1624 0.79 -0.5 1,684,951 + B158DRAFT_1624 0.86 -0.2 1,684,951 + B158DRAFT_1624 0.86 +0.4 1,684,951 + B158DRAFT_1624 0.86 +0.2 1,684,951 + B158DRAFT_1624 0.86 -1.7 1,684,951 + B158DRAFT_1624 0.86 +2.4 1,684,959 - B158DRAFT_1624 0.88 +0.2 1,684,959 - B158DRAFT_1624 0.88 +0.9 1,685,014 + +0.4 1,685,071 + -0.3 1,685,082 + +0.6 1,685,082 + -1.2 1,685,082 + -1.7 1,685,082 + -0.0 1,685,089 - -0.0 1,685,090 - -0.1 1,685,090 - -0.2 1,685,090 - +0.8 1,685,153 + B158DRAFT_1625 0.18 +0.1 1,685,156 + B158DRAFT_1625 0.19 -0.0 1,685,159 - B158DRAFT_1625 0.20 -2.4 1,685,161 - B158DRAFT_1625 0.20 -0.4 1,685,171 - B158DRAFT_1625 0.23 -0.4 1,685,187 - B158DRAFT_1625 0.28 +0.6 1,685,192 + B158DRAFT_1625 0.29 -0.0 1,685,244 + B158DRAFT_1625 0.44 -1.1 1,685,302 + B158DRAFT_1625 0.61 -0.9 1,685,302 + B158DRAFT_1625 0.61 -2.9 1,685,312 + B158DRAFT_1625 0.64 -0.5 1,685,312 + B158DRAFT_1625 0.64 +0.7 1,685,312 + B158DRAFT_1625 0.64 -0.9 1,685,312 + B158DRAFT_1625 0.64 -0.9 1,685,320 - B158DRAFT_1625 0.66 +0.5 1,685,320 - B158DRAFT_1625 0.66 -1.2 1,685,320 - B158DRAFT_1625 0.66 +1.8 1,685,335 - B158DRAFT_1625 0.70 -1.2 1,685,451 + -1.0 1,685,452 + -0.1 1,685,458 + -0.1 1,685,488 + +0.5 1,685,488 + -1.3 1,685,532 + B158DRAFT_1626 0.21 +0.5 1,685,546 + B158DRAFT_1626 0.26 -1.6 1,685,546 + B158DRAFT_1626 0.26 +3.1 1,685,546 + B158DRAFT_1626 0.26 -0.9 1,685,554 - B158DRAFT_1626 0.29 -0.2 1,685,554 - B158DRAFT_1626 0.29 +5.8 1,685,618 - B158DRAFT_1626 0.53 -0.4 1,685,618 - B158DRAFT_1626 0.53 +0.1 1,685,618 - B158DRAFT_1626 0.53 -0.6 1,685,629 + B158DRAFT_1626 0.57 -0.0 1,685,771 + +1.6 1,685,831 + +0.2 1,685,836 + -0.3 1,685,839 - +0.0 1,685,839 - -0.2 1,685,839 - -0.5 1,685,839 - +0.1 1,685,839 - -1.0 1,685,844 - -0.9 1,685,844 - +0.9 1,685,844 - -0.8 1,685,844 - +0.1 1,685,844 - -0.3 1,685,844 - +0.2 1,685,851 - +3.6 1,685,867 + -2.1 1,685,890 + -0.9 1,685,898 - +0.2 1,685,928 + +0.1 1,685,948 + +1.6 1,685,954 + +0.4 1,685,954 + +3.2 1,685,954 + -1.4 1,685,962 - -0.6 1,685,962 - -1.5 1,685,962 - -3.0 1,685,962 - +0.3 1,685,978 + -0.5 1,685,978 + -0.1 1,686,031 - +0.3 1,686,031 - -0.0 1,686,031 - +1.7 1,686,031 - +1.6 1,686,041 - +0.2 1,686,167 + -0.3 1,686,266 - +0.0 1,686,268 + -0.0 1,686,286 - -0.3 1,686,384 - B158DRAFT_1628 0.10 -0.7 1,686,385 + B158DRAFT_1628 0.10 +1.1 1,686,385 + B158DRAFT_1628 0.10 -0.1 1,686,385 + B158DRAFT_1628 0.10 -0.4 1,686,392 + B158DRAFT_1628 0.11 -0.4 1,686,405 + B158DRAFT_1628 0.11 -0.6 1,686,407 + B158DRAFT_1628 0.12 -0.1 1,686,407 + B158DRAFT_1628 0.12 -0.7 1,686,413 - B158DRAFT_1628 0.12 +0.5 1,686,415 - B158DRAFT_1628 0.12 -0.8 1,686,415 - B158DRAFT_1628 0.12 +1.6 1,686,415 - B158DRAFT_1628 0.12 -0.3 1,686,438 + B158DRAFT_1628 0.13 -1.0 1,686,438 - B158DRAFT_1628 0.13 +3.3 1,686,446 - B158DRAFT_1628 0.14 -0.4 1,686,486 - B158DRAFT_1628 0.16 -0.1 1,686,505 - B158DRAFT_1628 0.18 +0.0 1,686,511 + B158DRAFT_1628 0.18 -0.4 1,686,521 + B158DRAFT_1628 0.18 -0.1 1,686,538 + B158DRAFT_1628 0.20 -0.8 1,686,541 - B158DRAFT_1628 0.20 -1.1 1,686,546 - B158DRAFT_1628 0.20 -2.7 1,686,555 - B158DRAFT_1628 0.21 -1.1 1,686,555 - B158DRAFT_1628 0.21 -0.0 1,686,565 + B158DRAFT_1628 0.21 -0.1 1,686,587 - B158DRAFT_1628 0.23 -0.9 1,686,587 - B158DRAFT_1628 0.23 -0.9 1,686,591 + B158DRAFT_1628 0.23 -0.7 1,686,591 + B158DRAFT_1628 0.23 -1.5 1,686,591 + B158DRAFT_1628 0.23 +0.3 1,686,592 - B158DRAFT_1628 0.23 -0.1 1,686,599 - B158DRAFT_1628 0.23 +0.0 1,686,613 + B158DRAFT_1628 0.24 +0.2 1,686,621 - B158DRAFT_1628 0.25 +0.4 1,686,621 - B158DRAFT_1628 0.25 +0.3 1,686,621 - B158DRAFT_1628 0.25 -0.9 1,686,623 + B158DRAFT_1628 0.25 +1.6
Or see this region's nucleotide sequence